FFCP PHASE1:Mm9::chr5:93111808..93111831,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=176|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:93111808..93111831,+|id=chr5:93111808..93111831,+|ontology_enrichment_celltype=CL:0002453!5.70e-07!8|ontology_enrichment_celltype_v019_2=CL:0002453,1.19e-09,8;CL:0000128,1.73e-07,6;CL:0000126,1.73e-07,6;CL:0000127,1.73e-07,6;CL:0000333,3.33e-07,10;CL:0000095,3.33e-07,10;CL:0000243,3.33e-07,10;CL:0000123,3.33e-07,10;CL:0000125,3.33e-07,10;CL:0000030,3.33e-07,10;CL:0000339,3.33e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.36e-09!66;UBERON:0002048!1.11e-08!14;UBERON:0000117!1.11e-08!14;UBERON:0000171!1.11e-08!14;UBERON:0000170!1.11e-08!14;UBERON:0005597!1.11e-08!14;UBERON:0000118!1.11e-08!14;UBERON:0000025!2.58e-08!114;UBERON:0005153!2.16e-07!17;UBERON:0005177!4.20e-07!85;UBERON:0004111!7.16e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.36e-10,14;UBERON:0000117,1.36e-10,14;UBERON:0000171,1.36e-10,14;UBERON:0000170,1.36e-10,14;UBERON:0005597,1.36e-10,14;UBERON:0000118,1.36e-10,14;UBERON:0009569,5.48e-10,66;UBERON:0005153,5.52e-08,17;UBERON:0005178,5.52e-08,17;UBERON:0005181,5.52e-08,17;UBERON:0002224,5.52e-08,17;UBERON:0000915,5.52e-08,17;UBERON:0008947,5.52e-08,17;UBERON:0003258,5.52e-08,17;UBERON:0000025,4.45e-07,114|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.01237633694913,0.699561878128147,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,2.0190142737785,1.56478268869608,83.0675845809501,39.9828852576739,41.9968582000452,12.738764367908,24.4379359420452,0,0,0,0,1.14613375975503,0,0,0,1.90149421051854,4.06613438482959,1.77858959222228,0.449949858640699,0,0.7104801149461,15.8788058574755,37.2691756161908,2.28117147078651,1.21505344498522,1.47227472945967,1.14260393761521,2.42955395046775,1.10241719293459,0.575072826109418,0.919218786610021,0,0,0,0,0.0914876436024097,1.04182674111352,0.279182999001381,0,0.15279824777681,2.94628585473668,1.13897344639282,1.86399445825301,0,0,0.869593466105033,1.72084775396277,2.03991400112325,1.61910957491345,7.14754059192436,5.37632264516803,0.421333260395256,0,0,0,0,2.56652954828636,0,7.11066703153331,0,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0.376999773989026,0,0,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0,0,0,0,0.457500602818626,0.125654352112864,0,0,0.20778804455956,0,0.509196819251581,0.373220911830279,0.758168275301024,0.420883711772948,1.43132487258974,2.06911893990126,3.24111833649629,2.26057226753573,2.10913147369116,1.15302348256365,0.374806898238915,0.776110112217047,0,3.02569728268511,3.34307135911503,0.219195732427575,1.11218899690239,0,0,0.199034266818493,0,0,0,1.44988040774851,1.40715635988658,1.08037236876609,0.710234206755631,2.75469924446365,0.925602677324269,0.930135779001631,0.268273401399619,0.934122738937356,1.15191894939436,1.31333971263276,0.405344047729279,0.146199987425332,0,0.134206418760372,0,1.3377599609307,0,0.264450566663544,0,0,0.77320476793256,1.4117846723634,1.33426826306922,1.14135375667535,1.42358718463353,0.823494773620054,1.25667604400135,0.795825888164603,0.779856348476481,0.898819408654221,1.08069024937347,0.398282546508734,0,0.114248512609729,1.1270773567308,0,0.775809948670503,1.40271639780637,2.65593455921881,1.47610147979602,2.511979645462,1.48076596706161,2.66807364378434,0.333690211432188,0,0,0,0.241177159752417,0,0.575392274901621,0,0.823684239564244,0,1.86070473834252,3.74445207737473,2.77836765741823,2.51156378930677,2.8946611281802,11.8242041706627,0.189491411770485,0.814824882210129,2.54617628662782,3.05097322775053,7.37027532743989,8.09348379012447,6.04914308359176,8.51229778173431,9.30151696524855,6.69710028361446,14.4199716949849,9.32498902075836,14.3202567995696,0,0,0.491764273019036,0.551873492609465,1.44495530989013,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.425820255624806,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0,0,0,0,0,1.26042765821917,1.4229455216103,0.214337035031592,0.177340233642274,0.891844088010353,0.658196082408484,0.304464949114599,0,1.0591603543191,0,0.32977250588296,0,0.120625849856312,0.119372344003136,0.164140899745061,1.7488850197791,0.741701208042039,3.93003025835061,1.03193433981611,3.1483069652851,2.82552685507037,4.92099219795691,2.97411625168479,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.537080087002444,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,1.19513524027894,0.243106717068294,0.628839487883947,0.551530525350042,0.666740183404846,1.03017528619447,3.20919209591815,2.02157769411038,1.01391719956096,0.565879024158229,1.591905626988,0.832326981263301,0.861532034334199,1.42888107384922,0.927074607558844,0.192909220463705,0.824171801606613,1.17759136107518,1.37147700954166,1.59728225543404,0.953744759789284,0.290692833264657,1.03520318456864,0.592302255241736,1.28049581010941,1.31534855718921,1.22223702461276,0.561142271657738,0.474540072496697,0.788035859004508,0,0.77468420592983,1.54325288784913,0.749431733813838,0.467863216890817,0.859484216193193,0.191288332068843,0,0|short_description=p@chr5:93111808..93111831,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:93111808..93111831,+ | |||
|id=chr5:93111808..93111831,+ | |||
|ontology_enrichment_celltype=CL:0002453!5.70e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.19e-09,8;CL:0000128,1.73e-07,6;CL:0000126,1.73e-07,6;CL:0000127,1.73e-07,6;CL:0000333,3.33e-07,10;CL:0000095,3.33e-07,10;CL:0000243,3.33e-07,10;CL:0000123,3.33e-07,10;CL:0000125,3.33e-07,10;CL:0000030,3.33e-07,10;CL:0000339,3.33e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.36e-09!66;UBERON:0002048!1.11e-08!14;UBERON:0000117!1.11e-08!14;UBERON:0000171!1.11e-08!14;UBERON:0000170!1.11e-08!14;UBERON:0005597!1.11e-08!14;UBERON:0000118!1.11e-08!14;UBERON:0000025!2.58e-08!114;UBERON:0005153!2.16e-07!17;UBERON:0005177!4.20e-07!85;UBERON:0004111!7.16e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.36e-10,14;UBERON:0000117,1.36e-10,14;UBERON:0000171,1.36e-10,14;UBERON:0000170,1.36e-10,14;UBERON:0005597,1.36e-10,14;UBERON:0000118,1.36e-10,14;UBERON:0009569,5.48e-10,66;UBERON:0005153,5.52e-08,17;UBERON:0005178,5.52e-08,17;UBERON:0005181,5.52e-08,17;UBERON:0002224,5.52e-08,17;UBERON:0000915,5.52e-08,17;UBERON:0008947,5.52e-08,17;UBERON:0003258,5.52e-08,17;UBERON:0000025,4.45e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.01237633694913,0.699561878128147,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,2.0190142737785,1.56478268869608,83.0675845809501,39.9828852576739,41.9968582000452,12.738764367908,24.4379359420452,0,0,0,0,1.14613375975503,0,0,0,1.90149421051854,4.06613438482959,1.77858959222228,0.449949858640699,0,0.7104801149461,15.8788058574755,37.2691756161908,2.28117147078651,1.21505344498522,1.47227472945967,1.14260393761521,2.42955395046775,1.10241719293459,0.575072826109418,0.919218786610021,0,0,0,0,0.0914876436024097,1.04182674111352,0.279182999001381,0,0.15279824777681,2.94628585473668,1.13897344639282,1.86399445825301,0,0,0.869593466105033,1.72084775396277,2.03991400112325,1.61910957491345,7.14754059192436,5.37632264516803,0.421333260395256,0,0,0,0,2.56652954828636,0,7.11066703153331,0,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0.376999773989026,0,0,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0,0,0,0,0.457500602818626,0.125654352112864,0,0,0.20778804455956,0,0.509196819251581,0.373220911830279,0.758168275301024,0.420883711772948,1.43132487258974,2.06911893990126,3.24111833649629,2.26057226753573,2.10913147369116,1.15302348256365,0.374806898238915,0.776110112217047,0,3.02569728268511,3.34307135911503,0.219195732427575,1.11218899690239,0,0,0.199034266818493,0,0,0,1.44988040774851,1.40715635988658,1.08037236876609,0.710234206755631,2.75469924446365,0.925602677324269,0.930135779001631,0.268273401399619,0.934122738937356,1.15191894939436,1.31333971263276,0.405344047729279,0.146199987425332,0,0.134206418760372,0,1.3377599609307,0,0.264450566663544,0,0,0.77320476793256,1.4117846723634,1.33426826306922,1.14135375667535,1.42358718463353,0.823494773620054,1.25667604400135,0.795825888164603,0.779856348476481,0.898819408654221,1.08069024937347,0.398282546508734,0,0.114248512609729,1.1270773567308,0,0.775809948670503,1.40271639780637,2.65593455921881,1.47610147979602,2.511979645462,1.48076596706161,2.66807364378434,0.333690211432188,0,0,0,0.241177159752417,0,0.575392274901621,0,0.823684239564244,0,1.86070473834252,3.74445207737473,2.77836765741823,2.51156378930677,2.8946611281802,11.8242041706627,0.189491411770485,0.814824882210129,2.54617628662782,3.05097322775053,7.37027532743989,8.09348379012447,6.04914308359176,8.51229778173431,9.30151696524855,6.69710028361446,14.4199716949849,9.32498902075836,14.3202567995696,0,0,0.491764273019036,0.551873492609465,1.44495530989013,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.425820255624806,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0,0,0,0,0,1.26042765821917,1.4229455216103,0.214337035031592,0.177340233642274,0.891844088010353,0.658196082408484,0.304464949114599,0,1.0591603543191,0,0.32977250588296,0,0.120625849856312,0.119372344003136,0.164140899745061,1.7488850197791,0.741701208042039,3.93003025835061,1.03193433981611,3.1483069652851,2.82552685507037,4.92099219795691,2.97411625168479,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.537080087002444,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,1.19513524027894,0.243106717068294,0.628839487883947,0.551530525350042,0.666740183404846,1.03017528619447,3.20919209591815,2.02157769411038,1.01391719956096,0.565879024158229,1.591905626988,0.832326981263301,0.861532034334199,1.42888107384922,0.927074607558844,0.192909220463705,0.824171801606613,1.17759136107518,1.37147700954166,1.59728225543404,0.953744759789284,0.290692833264657,1.03520318456864,0.592302255241736,1.28049581010941,1.31534855718921,1.22223702461276,0.561142271657738,0.474540072496697,0.788035859004508,0,0.77468420592983,1.54325288784913,0.749431733813838,0.467863216890817,0.859484216193193,0.191288332068843,0,0 | |||
|short_description=p@chr5:93111808..93111831,+ | |||
}} |
Revision as of 08:21, 14 September 2013
Short description: | p@chr5:93111808..93111831, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:93111808..93111831, + |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.19e-09 | 8 |
oligodendrocyte | 1.73e-07 | 6 |
macroglial cell | 1.73e-07 | 6 |
astrocyte | 1.73e-07 | 6 |
migratory neural crest cell | 3.33e-07 | 10 |
neuron associated cell | 3.33e-07 | 10 |
glial cell (sensu Vertebrata) | 3.33e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.33e-07 | 10 |
glial cell | 3.33e-07 | 10 |
glioblast | 3.33e-07 | 10 |
glioblast (sensu Vertebrata) | 3.33e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lung | 1.36e-10 | 14 |
respiratory tube | 1.36e-10 | 14 |
respiration organ | 1.36e-10 | 14 |
pair of lungs | 1.36e-10 | 14 |
lung primordium | 1.36e-10 | 14 |
lung bud | 1.36e-10 | 14 |
subdivision of trunk | 5.48e-10 | 66 |
epithelial bud | 5.52e-08 | 17 |
thoracic cavity element | 5.52e-08 | 17 |
thoracic segment organ | 5.52e-08 | 17 |
thoracic cavity | 5.52e-08 | 17 |
thoracic segment of trunk | 5.52e-08 | 17 |
respiratory primordium | 5.52e-08 | 17 |
endoderm of foregut | 5.52e-08 | 17 |
tube | 4.45e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.