FFCP PHASE1:Mm9::chr6:114198085..114198112,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=287|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:114198085..114198112,+|id=chr6:114198085..114198112,+|ontology_enrichment_celltype=CL:0000117!2.64e-13!23;CL:0000337!2.64e-13!23;CL:0000540!6.46e-09!33;CL:0000047!6.46e-09!33;CL:0000031!6.46e-09!33;CL:0000404!6.46e-09!33;CL:0002319!1.30e-07!43;CL:0000221!2.53e-07!44;CL:0000133!2.53e-07!44;CL:0000393!7.73e-07!39;CL:0000211!7.73e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,9.77e-22,23;CL:0000337,9.77e-22,23;CL:0000540,1.33e-14,33;CL:0000047,1.33e-14,33;CL:0000031,1.33e-14,33;CL:0000404,1.33e-14,33;CL:0002610,2.69e-14,3;CL:0002614,4.91e-14,3;CL:0002612,1.32e-13,3;CL:0000393,4.48e-12,39;CL:0000211,4.48e-12,39;CL:0002319,8.84e-11,43;CL:0000221,1.71e-10,44;CL:0000133,1.71e-10,44;CL:0002611,4.99e-10,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.19e-27!52;UBERON:0005068!1.19e-27!52;UBERON:0006241!1.19e-27!52;UBERON:0007135!1.19e-27!52;UBERON:0001017!5.21e-27!73;UBERON:0005743!5.21e-27!73;UBERON:0000033!3.27e-26!63;UBERON:0000073!6.04e-26!75;UBERON:0001016!6.04e-26!75;UBERON:0000955!3.86e-25!50;UBERON:0006238!3.86e-25!50;UBERON:0002616!6.68e-24!49;UBERON:0002346!7.95e-24!71;UBERON:0003075!7.95e-24!71;UBERON:0007284!7.95e-24!71;UBERON:0002020!1.92e-22!34;UBERON:0004121!4.10e-21!102;UBERON:0000924!4.10e-21!102;UBERON:0006601!4.10e-21!102;UBERON:0003056!9.10e-21!49;UBERON:0003080!8.21e-19!40;UBERON:0002780!1.24e-17!39;UBERON:0001890!1.24e-17!39;UBERON:0006240!1.24e-17!39;UBERON:0007811!4.54e-16!86;UBERON:0002791!6.02e-16!29;UBERON:0003528!6.02e-16!29;UBERON:0001893!6.02e-16!29;UBERON:0000153!9.74e-14!94;UBERON:0002240!6.07e-10!6;UBERON:0005174!6.07e-10!6;UBERON:0001137!6.07e-10!6;UBERON:0002298!6.50e-10!6;UBERON:0003076!1.84e-09!12;UBERON:0003057!1.84e-09!12;UBERON:0000956!2.05e-09!21;UBERON:0001869!2.05e-09!21;UBERON:0000203!2.05e-09!21;UBERON:0002619!3.77e-09!17;UBERON:0001948!1.12e-08!5;UBERON:0002315!1.12e-08!5;UBERON:0002021!1.65e-08!10;UBERON:0000411!1.65e-08!10;UBERON:0001950!1.65e-08!10;UBERON:0002420!2.54e-08!8;UBERON:0007245!2.54e-08!8;UBERON:0010009!2.54e-08!8;UBERON:0010011!2.54e-08!8;UBERON:0000454!2.54e-08!8;UBERON:0000025!1.42e-07!114;UBERON:0002950!2.93e-07!4;UBERON:0001891!2.93e-07!4;UBERON:0009616!2.93e-07!4;UBERON:0004111!5.20e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.31e-26,54;UBERON:0002240,1.31e-25,6;UBERON:0005174,1.31e-25,6;UBERON:0001137,1.31e-25,6;UBERON:0001017,6.62e-23,73;UBERON:0001016,3.24e-22,75;UBERON:0001948,5.73e-22,5;UBERON:0002315,5.73e-22,5;UBERON:0003076,7.18e-22,12;UBERON:0003057,7.18e-22,12;UBERON:0001049,8.39e-21,52;UBERON:0005068,8.39e-21,52;UBERON:0006241,8.39e-21,52;UBERON:0007135,8.39e-21,52;UBERON:0002950,6.53e-18,4;UBERON:0001891,6.53e-18,4;UBERON:0009616,6.53e-18,4;UBERON:0010286,6.53e-18,4;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002346,2.19e-16,64;UBERON:0003075,2.19e-16,64;UBERON:0007284,2.19e-16,64;UBERON:0002020,4.28e-16,34;UBERON:0004684,2.69e-14,3;UBERON:0002275,2.69e-14,3;UBERON:0002038,4.91e-14,3;UBERON:0009663,4.91e-14,3;UBERON:0009661,4.91e-14,3;UBERON:0000125,4.91e-14,3;UBERON:0002308,4.91e-14,3;UBERON:0010371,5.07e-14,73;UBERON:0002257,1.32e-13,3;UBERON:0000955,7.87e-11,47;UBERON:0006238,7.87e-11,47;UBERON:0010314,1.54e-10,92;UBERON:0002256,4.99e-10,2;UBERON:0001896,2.94e-09,2;UBERON:0002298,2.94e-09,2;UBERON:0005290,2.94e-09,2;UBERON:0010096,2.94e-09,2;UBERON:0002616,3.08e-09,46;UBERON:0000025,6.04e-08,114;UBERON:0004111,3.13e-07,122;UBERON:0003080,3.42e-07,40;UBERON:0000489,5.70e-07,21|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0.210324961351382,8.85518051651791,7.50953039235486,0.122490799214954,0.0958454710182364,0,15.4162233399144,9.3211756802187,6.60508093001847,0.131886287730194,0.365950574409639,0,6.70039197603314,9.56696437053856,4.88954392885792,8.2496003932627,6.69146899755784,1.86399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,3.89455662452539,0.915001205637253,0.251308704225729,0.173824320192276,0.767146371990992,3.94797284663164,0.973447578406546,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,1.14579102687879,0.859265911718438,0,1.5107877947794,0,0.45032120322422,0.453142408984205,1.03552062350364,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0.476293691283074,0,0,0,0,0,0.354951612318675,0,0.145346416632329,0.376437521661322,0,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0|short_description=p@chr6:114198085..114198112,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=287 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:114198085..114198112,+ | |||
|id=chr6:114198085..114198112,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.64e-13!23;CL:0000337!2.64e-13!23;CL:0000540!6.46e-09!33;CL:0000047!6.46e-09!33;CL:0000031!6.46e-09!33;CL:0000404!6.46e-09!33;CL:0002319!1.30e-07!43;CL:0000221!2.53e-07!44;CL:0000133!2.53e-07!44;CL:0000393!7.73e-07!39;CL:0000211!7.73e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.77e-22,23;CL:0000337,9.77e-22,23;CL:0000540,1.33e-14,33;CL:0000047,1.33e-14,33;CL:0000031,1.33e-14,33;CL:0000404,1.33e-14,33;CL:0002610,2.69e-14,3;CL:0002614,4.91e-14,3;CL:0002612,1.32e-13,3;CL:0000393,4.48e-12,39;CL:0000211,4.48e-12,39;CL:0002319,8.84e-11,43;CL:0000221,1.71e-10,44;CL:0000133,1.71e-10,44;CL:0002611,4.99e-10,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.19e-27!52;UBERON:0005068!1.19e-27!52;UBERON:0006241!1.19e-27!52;UBERON:0007135!1.19e-27!52;UBERON:0001017!5.21e-27!73;UBERON:0005743!5.21e-27!73;UBERON:0000033!3.27e-26!63;UBERON:0000073!6.04e-26!75;UBERON:0001016!6.04e-26!75;UBERON:0000955!3.86e-25!50;UBERON:0006238!3.86e-25!50;UBERON:0002616!6.68e-24!49;UBERON:0002346!7.95e-24!71;UBERON:0003075!7.95e-24!71;UBERON:0007284!7.95e-24!71;UBERON:0002020!1.92e-22!34;UBERON:0004121!4.10e-21!102;UBERON:0000924!4.10e-21!102;UBERON:0006601!4.10e-21!102;UBERON:0003056!9.10e-21!49;UBERON:0003080!8.21e-19!40;UBERON:0002780!1.24e-17!39;UBERON:0001890!1.24e-17!39;UBERON:0006240!1.24e-17!39;UBERON:0007811!4.54e-16!86;UBERON:0002791!6.02e-16!29;UBERON:0003528!6.02e-16!29;UBERON:0001893!6.02e-16!29;UBERON:0000153!9.74e-14!94;UBERON:0002240!6.07e-10!6;UBERON:0005174!6.07e-10!6;UBERON:0001137!6.07e-10!6;UBERON:0002298!6.50e-10!6;UBERON:0003076!1.84e-09!12;UBERON:0003057!1.84e-09!12;UBERON:0000956!2.05e-09!21;UBERON:0001869!2.05e-09!21;UBERON:0000203!2.05e-09!21;UBERON:0002619!3.77e-09!17;UBERON:0001948!1.12e-08!5;UBERON:0002315!1.12e-08!5;UBERON:0002021!1.65e-08!10;UBERON:0000411!1.65e-08!10;UBERON:0001950!1.65e-08!10;UBERON:0002420!2.54e-08!8;UBERON:0007245!2.54e-08!8;UBERON:0010009!2.54e-08!8;UBERON:0010011!2.54e-08!8;UBERON:0000454!2.54e-08!8;UBERON:0000025!1.42e-07!114;UBERON:0002950!2.93e-07!4;UBERON:0001891!2.93e-07!4;UBERON:0009616!2.93e-07!4;UBERON:0004111!5.20e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.31e-26,54;UBERON:0002240,1.31e-25,6;UBERON:0005174,1.31e-25,6;UBERON:0001137,1.31e-25,6;UBERON:0001017,6.62e-23,73;UBERON:0001016,3.24e-22,75;UBERON:0001948,5.73e-22,5;UBERON:0002315,5.73e-22,5;UBERON:0003076,7.18e-22,12;UBERON:0003057,7.18e-22,12;UBERON:0001049,8.39e-21,52;UBERON:0005068,8.39e-21,52;UBERON:0006241,8.39e-21,52;UBERON:0007135,8.39e-21,52;UBERON:0002950,6.53e-18,4;UBERON:0001891,6.53e-18,4;UBERON:0009616,6.53e-18,4;UBERON:0010286,6.53e-18,4;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002346,2.19e-16,64;UBERON:0003075,2.19e-16,64;UBERON:0007284,2.19e-16,64;UBERON:0002020,4.28e-16,34;UBERON:0004684,2.69e-14,3;UBERON:0002275,2.69e-14,3;UBERON:0002038,4.91e-14,3;UBERON:0009663,4.91e-14,3;UBERON:0009661,4.91e-14,3;UBERON:0000125,4.91e-14,3;UBERON:0002308,4.91e-14,3;UBERON:0010371,5.07e-14,73;UBERON:0002257,1.32e-13,3;UBERON:0000955,7.87e-11,47;UBERON:0006238,7.87e-11,47;UBERON:0010314,1.54e-10,92;UBERON:0002256,4.99e-10,2;UBERON:0001896,2.94e-09,2;UBERON:0002298,2.94e-09,2;UBERON:0005290,2.94e-09,2;UBERON:0010096,2.94e-09,2;UBERON:0002616,3.08e-09,46;UBERON:0000025,6.04e-08,114;UBERON:0004111,3.13e-07,122;UBERON:0003080,3.42e-07,40;UBERON:0000489,5.70e-07,21 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0.210324961351382,8.85518051651791,7.50953039235486,0.122490799214954,0.0958454710182364,0,15.4162233399144,9.3211756802187,6.60508093001847,0.131886287730194,0.365950574409639,0,6.70039197603314,9.56696437053856,4.88954392885792,8.2496003932627,6.69146899755784,1.86399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,3.89455662452539,0.915001205637253,0.251308704225729,0.173824320192276,0.767146371990992,3.94797284663164,0.973447578406546,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,1.14579102687879,0.859265911718438,0,1.5107877947794,0,0.45032120322422,0.453142408984205,1.03552062350364,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0.476293691283074,0,0,0,0,0,0.354951612318675,0,0.145346416632329,0.376437521661322,0,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr6:114198085..114198112,+ | |||
}} |
Revision as of 08:34, 14 September 2013
Short description: | p@chr6:114198085..114198112, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:114198085..114198112, + |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.77e-22 | 23 |
neuroblast (sensu Vertebrata) | 9.77e-22 | 23 |
neuron | 1.33e-14 | 33 |
neuronal stem cell | 1.33e-14 | 33 |
neuroblast | 1.33e-14 | 33 |
electrically signaling cell | 1.33e-14 | 33 |
raphe nuclei neuron | 2.69e-14 | 3 |
neuron of the substantia nigra | 4.91e-14 | 3 |
neuron of the ventral spinal cord | 1.32e-13 | 3 |
electrically responsive cell | 4.48e-12 | 39 |
electrically active cell | 4.48e-12 | 39 |
neural cell | 8.84e-11 | 43 |
ectodermal cell | 1.71e-10 | 44 |
neurectodermal cell | 1.71e-10 | 44 |
neuron of the dorsal spinal cord | 4.99e-10 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.