FFCP PHASE1:Hg19::chr9:33265011..33265059,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51510 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26942 | |||
|TSSclassifier=S | |||
|UniProt=B4DIR6 | |||
|association_with_transcript=0bp_to_ENST00000419016_5end | |||
|description=CAGE_peak_1_at_CHMP5_5end | |||
|id=chr9:33265011..33265059,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.46e-11!57;UBERON:0005068!1.46e-11!57;UBERON:0006241!1.46e-11!57;UBERON:0007135!1.46e-11!57;UBERON:0002780!3.33e-11!41;UBERON:0001890!3.33e-11!41;UBERON:0006240!3.33e-11!41;UBERON:0003080!9.00e-11!42;UBERON:0001017!3.15e-10!82;UBERON:0005743!1.46e-09!86;UBERON:0000073!2.63e-09!94;UBERON:0001016!2.63e-09!94;UBERON:0002616!2.87e-09!59;UBERON:0002020!3.85e-09!34;UBERON:0003528!3.85e-09!34;UBERON:0000955!5.75e-09!69;UBERON:0006238!5.75e-09!69;UBERON:0000062!6.14e-09!511;UBERON:0001893!2.19e-08!34;UBERON:0002791!3.34e-08!33;UBERON:0001869!3.69e-08!32;UBERON:0000468!4.73e-08!659;UBERON:0000467!5.76e-08!625;UBERON:0000480!1.06e-07!626;UBERON:0003075!2.67e-07!86;UBERON:0007284!2.67e-07!86;UBERON:0002619!3.18e-07!22;UBERON:0002346!5.94e-07!90;UBERON:0007023!7.89e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.58e-08;41!UBERON:0001890;3.58e-08;41!UBERON:0003528;7.23e-08;34!UBERON:0002020;7.23e-08;34!UBERON:0002791;1.28e-07;32!UBERON:0001869;1.77e-07;32!UBERON:0002619;3.05e-07;22!UBERON:0001893;3.13e-07;34!UBERON:0000073;6.66e-07;53!UBERON:0002616;6.66e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.30e-12,56;UBERON:0005068,6.30e-12,56;UBERON:0006241,6.30e-12,56;UBERON:0007135,6.30e-12,56;UBERON:0002780,3.33e-11,41;UBERON:0001890,3.33e-11,41;UBERON:0003080,3.33e-11,41;UBERON:0006240,3.33e-11,41;UBERON:0000073,4.51e-11,53;UBERON:0002616,4.51e-11,53;UBERON:0001017,1.76e-10,81;UBERON:0001016,3.90e-10,89;UBERON:0000955,3.20e-09,68;UBERON:0006238,3.20e-09,68;UBERON:0003528,3.85e-09,34;UBERON:0002020,3.85e-09,34;UBERON:0001893,2.19e-08,34;UBERON:0002791,2.43e-08,32;UBERON:0001869,3.69e-08,32;UBERON:0003075,1.85e-07,82;UBERON:0007284,1.85e-07,82;UBERON:0002619,3.18e-07,22;UBERON:0002346,4.31e-07,86;UBERON:0002050,6.22e-07,564;UBERON:0010371,6.53e-07,104 | |||
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| |||
|short_description=p1@CHMP5 | |||
}} |
Revision as of 08:46, 14 September 2013
Short description: | p1@CHMP5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CHMP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000419016_5end |
EntrezGene: | CHMP5 |
HGNC: | 26942 |
UniProt: | B4DIR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 6.30e-12 | 56 |
neural rod | 6.30e-12 | 56 |
future spinal cord | 6.30e-12 | 56 |
neural keel | 6.30e-12 | 56 |
regional part of forebrain | 3.33e-11 | 41 |
forebrain | 3.33e-11 | 41 |
anterior neural tube | 3.33e-11 | 41 |
future forebrain | 3.33e-11 | 41 |
regional part of nervous system | 4.51e-11 | 53 |
regional part of brain | 4.51e-11 | 53 |
central nervous system | 1.76e-10 | 81 |
nervous system | 3.90e-10 | 89 |
brain | 3.20e-09 | 68 |
future brain | 3.20e-09 | 68 |
brain grey matter | 3.85e-09 | 34 |
gray matter | 3.85e-09 | 34 |
telencephalon | 2.19e-08 | 34 |
regional part of telencephalon | 2.43e-08 | 32 |
cerebral hemisphere | 3.69e-08 | 32 |
neural plate | 1.85e-07 | 82 |
presumptive neural plate | 1.85e-07 | 82 |
regional part of cerebral cortex | 3.18e-07 | 22 |
neurectoderm | 4.31e-07 | 86 |
embryonic structure | 6.22e-07 | 564 |
ecto-epithelium | 6.53e-07 | 104 |
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