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FFCP PHASE1:Mm9::chr6:122289815..122289894,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=13619|HGNC=|MCL_coexpression_id=0|UniProt=E0CYR2|association_with_transcript=-89bp_to_ENSMUST00000161149_5end|description=CAGE_peak_1_at_Phc1_5end|id=chr6:122289815..122289894,-|ontology_enrichment_celltype=CL:0000540!4.00e-12!33;CL:0000047!4.00e-12!33;CL:0000031!4.00e-12!33;CL:0000404!4.00e-12!33;CL:0000117!2.67e-10!23;CL:0000337!2.67e-10!23;CL:0002319!3.82e-09!43;CL:0000221!4.51e-09!44;CL:0000133!4.51e-09!44;CL:0000393!1.50e-08!39;CL:0000211!1.50e-08!39|ontology_enrichment_celltype_v019_2=CL:0000540,3.92e-12,33;CL:0000047,3.92e-12,33;CL:0000031,3.92e-12,33;CL:0000404,3.92e-12,33;CL:0000117,2.63e-10,23;CL:0000337,2.63e-10,23;CL:0002319,3.77e-09,43;CL:0000221,4.44e-09,44;CL:0000133,4.44e-09,44;CL:0000393,1.48e-08,39;CL:0000211,1.48e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.91e-14!94;UBERON:0001017!1.95e-12!73;UBERON:0005743!1.95e-12!73;UBERON:0007811!4.47e-12!86;UBERON:0000073!1.17e-11!75;UBERON:0001016!1.17e-11!75;UBERON:0002346!3.67e-10!71;UBERON:0003075!3.67e-10!71;UBERON:0007284!3.67e-10!71;UBERON:0004121!1.54e-09!102;UBERON:0000924!1.54e-09!102;UBERON:0006601!1.54e-09!102;UBERON:0000033!6.05e-09!63;UBERON:0001049!1.24e-08!52;UBERON:0005068!1.24e-08!52;UBERON:0006241!1.24e-08!52;UBERON:0007135!1.24e-08!52;UBERON:0003056!1.71e-08!49;UBERON:0000955!9.32e-07!50;UBERON:0006238!9.32e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.91e-12,73;UBERON:0002346,1.01e-11,64;UBERON:0003075,1.01e-11,64;UBERON:0007284,1.01e-11,64;UBERON:0001016,1.15e-11,75;UBERON:0004121,1.51e-10,95;UBERON:0000924,1.51e-10,95;UBERON:0006601,1.51e-10,95;UBERON:0010371,6.62e-09,73;UBERON:0001049,1.23e-08,52;UBERON:0005068,1.23e-08,52;UBERON:0006241,1.23e-08,52;UBERON:0007135,1.23e-08,52;UBERON:0000073,1.47e-08,54;UBERON:0003056,1.69e-08,49;UBERON:0000153,1.47e-07,43;UBERON:0010314,1.91e-07,92|phase1_expression=13.1322054625931,0.697950815278722,1.36499771816861,0,0,0.839396359559449,1.63528848416868,7.87652272993615,9.01047821770667,13.5757425266756,2.91070545983358,1.83475965689274,8.04643430676667,7.08105259593879,1.33243904726265,0.809901069559304,0.699561878128147,4.88966356305268,4.66189074259512,6.36584477697045,34.4425325111833,2.48227378002213,2.08959831311148,0.799962113967033,0,0,1.29228598847722,0.215471232685889,0.190023419456374,1.00812051903972,0.443461021310609,1.27006134691926,3.69038872550742,15.8481681015439,0.866554859253824,0.997407872150954,0.408338712524738,2.09265815368454,0.7813353445238,1.57057123192139,1.76469446409304,1.36609096991689,2.91306211818692,3.02152363141385,3.4468156614635,2.56965453026354,7.04152209913235,5.88667922227206,3.29529274101708,5.24960727500565,3.63964696225943,4.31257693094915,6.20795642413625,7.97898356212479,6.72187598284928,1.80081605225163,4.58453503902011,2.06268836910977,27.3127222160457,23.8045940672415,22.1840991227163,2.71075625655306,2.66788438833342,0.449949858640699,1.97773272513395,1.4209602298922,8.08920298399693,6.91592949578798,23.7449212186414,22.8160035780557,18.9292465216244,20.2812198926701,15.2399293256613,20.8234358665422,22.2361492762308,15.6267193723704,7.70811166995721,7.66124028511126,6.91229399653096,32.9715719325485,31.929187617241,19.7947080811569,6.97957497503452,3.93933827022176,9.93188610549266,13.8475435172624,17.2269733766915,26.4687213071927,3.25622631332691,2.94729084416464,5.2175607966302,0,0,1.07940638327563,0.649776417447669,0,5.61777680527007,1.87473354835864,2.85764605063156,2.47337702157238,6.4787973097273,2.56652954828636,2.54805239706646,14.2213340630666,0.865964164044856,0.760079596425296,1.01104889002957,5.93756174539112,5.43769555659061,4.60170631100957,6.93941307064543,5.48037860961854,2.53677046981664,3.76806601381556,7.05532242814229,2.38766523526383,3.70792451601561,4.33798070759735,3.5384422077995,5.82360659810673,3.97514733228708,4.363877278217,0,8.19786231632332,6.91174132484402,1.27728527604296,2.63593273913025,0.599902730993408,3.04968544975355,8.98743836428936,12.3525162761029,25.3821791267986,7.30062144807561,4.09144731728529,9.97382613885888,7.46309810111685,15.3777439413978,4.97627882440372,4.54900965180614,5.26104639716185,13.6626465110839,12.644615743841,17.8261508507296,12.8099095160358,20.4789862445497,16.0142150356062,14.8985742049969,5.95017752699736,21.7723672862171,15.5066985737612,12.4925298156404,11.1789823538063,8.34141747676794,7.66154766348766,9.05441400194951,9.55364480728767,1.40442637462647,2.05878325691772,0.568326998791185,8.90640821902658,7.50483391939508,7.92273070428465,6.39210786080068,4.9191057936851,3.70241070929708,3.0229412817553,5.633741429392,4.55384835231961,6.58239399653922,3.94001913789829,4.86412857275134,2.63159977365598,3.51280184465681,3.89198614405078,4.41608891984667,24.9029161957868,0.330418782983798,0,11.5175655289026,10.4506502337197,9.40732467651281,6.6555563125703,5.55945109612176,4.37518940058886,1.42358718463353,3.29397909448022,2.76468729680296,3.38226002469956,3.11942539390592,1.7976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|EntrezGene=13619
|HGNC=
|MCL_coexpression_id=0
|UniProt=E0CYR2
|association_with_transcript=-89bp_to_ENSMUST00000161149_5end
|description=CAGE_peak_1_at_Phc1_5end
|id=chr6:122289815..122289894,-
|ontology_enrichment_celltype=CL:0000540!4.00e-12!33;CL:0000047!4.00e-12!33;CL:0000031!4.00e-12!33;CL:0000404!4.00e-12!33;CL:0000117!2.67e-10!23;CL:0000337!2.67e-10!23;CL:0002319!3.82e-09!43;CL:0000221!4.51e-09!44;CL:0000133!4.51e-09!44;CL:0000393!1.50e-08!39;CL:0000211!1.50e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000540,3.92e-12,33;CL:0000047,3.92e-12,33;CL:0000031,3.92e-12,33;CL:0000404,3.92e-12,33;CL:0000117,2.63e-10,23;CL:0000337,2.63e-10,23;CL:0002319,3.77e-09,43;CL:0000221,4.44e-09,44;CL:0000133,4.44e-09,44;CL:0000393,1.48e-08,39;CL:0000211,1.48e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!3.91e-14!94;UBERON:0001017!1.95e-12!73;UBERON:0005743!1.95e-12!73;UBERON:0007811!4.47e-12!86;UBERON:0000073!1.17e-11!75;UBERON:0001016!1.17e-11!75;UBERON:0002346!3.67e-10!71;UBERON:0003075!3.67e-10!71;UBERON:0007284!3.67e-10!71;UBERON:0004121!1.54e-09!102;UBERON:0000924!1.54e-09!102;UBERON:0006601!1.54e-09!102;UBERON:0000033!6.05e-09!63;UBERON:0001049!1.24e-08!52;UBERON:0005068!1.24e-08!52;UBERON:0006241!1.24e-08!52;UBERON:0007135!1.24e-08!52;UBERON:0003056!1.71e-08!49;UBERON:0000955!9.32e-07!50;UBERON:0006238!9.32e-07!50
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.91e-12,73;UBERON:0002346,1.01e-11,64;UBERON:0003075,1.01e-11,64;UBERON:0007284,1.01e-11,64;UBERON:0001016,1.15e-11,75;UBERON:0004121,1.51e-10,95;UBERON:0000924,1.51e-10,95;UBERON:0006601,1.51e-10,95;UBERON:0010371,6.62e-09,73;UBERON:0001049,1.23e-08,52;UBERON:0005068,1.23e-08,52;UBERON:0006241,1.23e-08,52;UBERON:0007135,1.23e-08,52;UBERON:0000073,1.47e-08,54;UBERON:0003056,1.69e-08,49;UBERON:0000153,1.47e-07,43;UBERON:0010314,1.91e-07,92
|phase1_expression=13.1322054625931,0.697950815278722,1.36499771816861,0,0,0.839396359559449,1.63528848416868,7.87652272993615,9.01047821770667,13.5757425266756,2.91070545983358,1.83475965689274,8.04643430676667,7.08105259593879,1.33243904726265,0.809901069559304,0.699561878128147,4.88966356305268,4.66189074259512,6.36584477697045,34.4425325111833,2.48227378002213,2.08959831311148,0.799962113967033,0,0,1.29228598847722,0.215471232685889,0.190023419456374,1.00812051903972,0.443461021310609,1.27006134691926,3.69038872550742,15.8481681015439,0.866554859253824,0.997407872150954,0.408338712524738,2.09265815368454,0.7813353445238,1.57057123192139,1.76469446409304,1.36609096991689,2.91306211818692,3.02152363141385,3.4468156614635,2.56965453026354,7.04152209913235,5.88667922227206,3.29529274101708,5.24960727500565,3.63964696225943,4.31257693094915,6.20795642413625,7.97898356212479,6.72187598284928,1.80081605225163,4.58453503902011,2.06268836910977,27.3127222160457,23.8045940672415,22.1840991227163,2.71075625655306,2.66788438833342,0.449949858640699,1.97773272513395,1.4209602298922,8.08920298399693,6.91592949578798,23.7449212186414,22.8160035780557,18.9292465216244,20.2812198926701,15.2399293256613,20.8234358665422,22.2361492762308,15.6267193723704,7.70811166995721,7.66124028511126,6.91229399653096,32.9715719325485,31.929187617241,19.7947080811569,6.97957497503452,3.93933827022176,9.93188610549266,13.8475435172624,17.2269733766915,26.4687213071927,3.25622631332691,2.94729084416464,5.2175607966302,0,0,1.07940638327563,0.649776417447669,0,5.61777680527007,1.87473354835864,2.85764605063156,2.47337702157238,6.4787973097273,2.56652954828636,2.54805239706646,14.2213340630666,0.865964164044856,0.760079596425296,1.01104889002957,5.93756174539112,5.43769555659061,4.60170631100957,6.93941307064543,5.48037860961854,2.53677046981664,3.76806601381556,7.05532242814229,2.38766523526383,3.70792451601561,4.33798070759735,3.5384422077995,5.82360659810673,3.97514733228708,4.363877278217,0,8.19786231632332,6.91174132484402,1.27728527604296,2.63593273913025,0.599902730993408,3.04968544975355,8.98743836428936,12.3525162761029,25.3821791267986,7.30062144807561,4.09144731728529,9.97382613885888,7.46309810111685,15.3777439413978,4.97627882440372,4.54900965180614,5.26104639716185,13.6626465110839,12.644615743841,17.8261508507296,12.8099095160358,20.4789862445497,16.0142150356062,14.8985742049969,5.95017752699736,21.7723672862171,15.5066985737612,12.4925298156404,11.1789823538063,8.34141747676794,7.66154766348766,9.05441400194951,9.55364480728767,1.40442637462647,2.05878325691772,0.568326998791185,8.90640821902658,7.50483391939508,7.92273070428465,6.39210786080068,4.9191057936851,3.70241070929708,3.0229412817553,5.633741429392,4.55384835231961,6.58239399653922,3.94001913789829,4.86412857275134,2.63159977365598,3.51280184465681,3.89198614405078,4.41608891984667,24.9029161957868,0.330418782983798,0,11.5175655289026,10.4506502337197,9.40732467651281,6.6555563125703,5.55945109612176,4.37518940058886,1.42358718463353,3.29397909448022,2.76468729680296,3.38226002469956,3.11942539390592,1.79763881730844,3.02593269824572,2.19055400579804,10.6214024533726,10.1681176222659,4.50830942692322,8.5533557695032,8.53390943537553,11.4321386421219,8.34722290040196,8.70899873079653,6.90794402502049,6.41665252393363,0.296452627087149,3.00321190288969,4.12773889737726,1.12431056192427,1.01430060694251,1.4470629585145,0.763877555344259,1.43848068725405,3.08056930872567,0.549122826376163,4.31304619582064,2.60498663367952,1.24815069245824,0.505157755894224,1.07638448113147,1.4473305640901,4.98833613449833,7.57965647081939,11.2445833744998,9.67546988918572,7.74477819352057,6.86775655511445,7.37935286746643,6.04914308359176,9.93101407869003,7.9727288273559,11.9591076493115,6.22680595919804,5.00786447411097,5.20736610893442,0,0,0.491764273019036,1.10374698521893,7.86697890940181,8.90808818100744,4.59017847054691,5.80683132570058,7.88770548540642,7.41833614163613,9.26320610251035,9.31978312014953,8.24355094104858,13.8707500086528,10.9298889452221,7.59865230569411,12.2539211163422,12.5315313404505,4.9679029822894,14.2452482933804,19.7093220817827,8.08353602565424,5.30980553359851,9.71122544619926,4.23252979750651,3.77210159511796,5.02013217897314,6.45613810682248,5.16856586336442,5.45300594216258,3.20847640546249,1.8962205476149,2.10837217149998,5.15677716240934,7.83011093233712,11.8840322060665,13.4533031134065,12.8602221018955,13.8325382240973,12.8425548673491,8.72109809191241,14.6143175575008,1.40803024838226,1.0591603543191,1.32317038832977,3.13283880588812,4.68246837418126,4.82503399425247,1.90995750405018,0.984845398470368,2.62332752966866,9.6421157045465,3.07567585436135,6.60437977482312,3.51869602002452,1.88368457004691,2.1871076435364,1.37266903923914,6.62915876976036,7.55737842547753,8.153798454461,2.86401185404534,16.7658076598002,8.3360981522008,5.72428306355547,6.27264888043406,4.14888871117737,4.18079473792944,5.20716771069616,2.35580347785627,2.20345454596048,4.34937519160848,179.818047440257,12.1108402295623,9.76205093696876,13.2226808073952,11.8827037599513,9.12363077650202,14.0828686374905,12.8902340995511,10.171356409294,52.4237542192433,81.2244617647181,10.7443781013581,8.5144590421869,4.62199307241723,5.58659538804519,11.0996551313838,12.9142880607822,11.1781768053571,12.2582307554899,10.8034101444518,12.95515713135,12.8049255123787,14.7161399917026,12.7961749381638,14.375858968333,2.49403421976732,1.99787358036658,1.97370484540847,0.335769232728157,4.63655025677257,1.68914227906064,3.11357761254351,1.2862102744744,3.00943262421218,5.0827665835536,5.06357760157895,6.30185064783336,3.78077001156113,5.48066015816514,3.7769694869485,3.37511250115903,4.95353323546643,2.26571204492102,3.10656187051092,16.9173376562208,21.1483182902546,11.439151585527,9.72426868273176,10.2710449687711,9.92754945630076,8.88986911206461,9.27157757575024,4.49286893428541,6.31743029409494,8.36481689637791,6.79054828989874,6.46126401542189,8.25924466022814,8.50044940543076,10.4784612082276,10.7772423128716,9.25964258225784,6.1812885120496,6.77115032618228,4.4573002810104,7.0990322463735,8.10683045820891,6.83128158171944,7.24642229198046,6.51532480765909,6.58540702341981,7.62902163169744,5.56796866768033,5.61142271657738,9.01626137743724,6.99381824866501,9.00308294973317,9.45114731234393,8.68079749415136,13.739581786587,7.95367468714389,6.01638951335235,8.99055160723564,3.08827986767322,4.17362104116759
|short_description=p1@Phc1
}}

Revision as of 08:46, 14 September 2013

Short description:p1@Phc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Phc1_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -89bp_to_ENSMUST00000161149_5end
EntrezGene:Phc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Phc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F213.58
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.08
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.66
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A334.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.45
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.21
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C327.31
Mouse Granule cells, donor2.CNhs12357.11731-123E323.80
Mouse Granule cells, donor3.CNhs12108.11636-122C722.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D523.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.82
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.24
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D432.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F431.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.79
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E126.47
Mouse Schwann, donor1.CNhs12507.11728-123D93.26
Mouse Schwann, donor2.CNhs12573.11746-123F92.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.94
accessory axillary lymph node, adult.CNhs10475.1063-29H95.44
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C17.06
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.20
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A48.99
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F125.38
cortex, adult.CNhs10473.12-14D57.30
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B27.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.38
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.98
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C613.66
eyeball, embryo E14.CNhs10521.399-16E212.64
eyeball, embryo E15.CNhs10593.426-16C917.83
eyeball, embryo E17.CNhs11023.1261-18D412.81
eyeball, neonate N00.CNhs11207.633-15C620.48
eyeball, neonate N01.CNhs11140.1532-43E716.01
eyeball, neonate N02.CNhs11205.1551-44G814.90
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E221.77
forelimb, embryo E12.CNhs10600.359-14H215.51
forelimb, embryo E13.CNhs10589.384-1E212.49
forelimb, embryo E14.CNhs10577.413-26A811.18
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B59.05
gonad, embryo E13.CNhs11044.1564-45I69.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E98.91
heart, embryo E12.CNhs11015.353-12F57.50
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E34.55
heart, neonate N03.CNhs11221.1349-25I26.58
heart, neonate N10.CNhs11118.749-24G13.94
heart, neonate N16.CNhs11209.782-15G14.86
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D23.89
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G124.90
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I511.52
intestine, embryo E13.CNhs11010.381-16D510.45
intestine, embryo E15.CNhs10602.976-16D89.41
intestine, embryo E16.CNhs10585.463-22H46.66
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F74.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I910.62
kidney, embryo E15.CNhs10997.434-16F810.17
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I28.55
kidney, embryo E18.CNhs11001.1288-20C78.53
kidney, neonate N00.CNhs11214.646-21G711.43
kidney, neonate N10.CNhs11206.758-6D58.35
kidney, neonate N20.CNhs11113.832-19I18.71
kidney, neonate N25.CNhs11122.1353-25F36.91
kidney, neonate N30.CNhs11203.1385-42H16.42
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G27.58
lung, embryo E14.CNhs10604.404-26F811.24
lung, embryo E15.CNhs11020.432-17C59.68
lung, embryo E16.CNhs10998.458-17B67.74
lung, embryo E17.CNhs10605.480-44A66.87
lung, embryo E18.CNhs10583.1287-20I67.38
lung, neonate N00.CNhs11224.640-42C66.05
lung, neonate N06.CNhs11212.683-20E59.93
lung, neonate N07.CNhs11111.715-19A37.97
lung, neonate N10.CNhs11219.750-23E611.96
lung, neonate N20.CNhs11109.822-18A46.23
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H25.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A38.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.59
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.26
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.32
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.87
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I74.97
ovary, embryo E18.CNhs11040.505-44H714.25
ovary, neonate N00.CNhs11217.1299-22I419.71
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F49.71
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I76.46
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E611.88
pituitary gland, embryo E13.CNhs11009.370-44C713.45
pituitary gland, embryo E14.CNhs11037.398-44A512.86
pituitary gland, embryo E15.CNhs10592.427-16B913.83
pituitary gland, embryo E16.CNhs11036.449-43F612.84
pituitary gland, embryo E17.CNhs11039.1265-44F58.72
pituitary gland, neonate N00.CNhs11190.1308-22E914.61
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G44.68
skin, neonate N03.CNhs11215.662-22H34.83
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C99.64
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.15
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E316.77
stomach, embryo E15.CNhs10603.1252-16G88.34
stomach, embryo E16.CNhs11022.459-17D45.72
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C64.15
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A95.21
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G5179.82
testis, embryo E13.CNhs11031.389-23F512.11
testis, embryo E15.CNhs11034.443-27C59.76
testis, embryo E16.CNhs11033.470-26G513.22
testis, embryo E17.CNhs11029.486-18I511.88
testis, embryo E18.CNhs11027.503-18G59.12
testis, neonate N00.CNhs11189.1300-22B714.08
testis, neonate N07.CNhs11222.726-26I412.89
testis, neonate N10.CNhs11204.763-44D910.17
testis, neonate N20.CNhs11110.839-18H352.42
testis, neonate N30.CNhs11130.1391-42E281.22
thymus, adult.CNhs10471.38-12B510.74
thymus, embryo E14.CNhs11041.402-44I48.51
thymus, embryo E15.CNhs11005.430-45I24.62
thymus, embryo E16.CNhs11002.456-26C55.59
thymus, embryo E17.CNhs10581.478-18C111.10
thymus, embryo E18.CNhs10595.1273-19G412.91
thymus, neonate N02.CNhs11181.1541-43F811.18
thymus, neonate N03.CNhs11137.2104-43C712.26
thymus, neonate N06.CNhs11197.681-26C410.80
thymus, neonate N07.CNhs11211.713-19D312.96
thymus, neonate N10.CNhs11194.748-24E412.80
thymus, neonate N20.CNhs11186.820-7A214.72
thymus, neonate N25.CNhs11125.1362-25G712.80
thymus, neonate N30.CNhs11132.1393-42G214.38
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I816.92
whole body, embryo E12.CNhs10587.857-27C921.15
whole body, embryo E13.CNhs10512.372-23H211.44
whole body, embryo E14.5.CNhs10578.420-27D29.72
whole body, embryo E14.CNhs10519.395-14B110.27
whole body, embryo E16.CNhs10514.453-14F29.93
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.25
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.45
whole body, embryo E17.5.CNhs10513.490-9F98.68
whole body, embryo E17.CNhs10517.475-3I513.74
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C68.99
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.92e-1233
neuronal stem cell3.92e-1233
neuroblast3.92e-1233
electrically signaling cell3.92e-1233
CNS neuron (sensu Vertebrata)2.63e-1023
neuroblast (sensu Vertebrata)2.63e-1023
neural cell3.77e-0943
ectodermal cell4.44e-0944
neurectodermal cell4.44e-0944
electrically responsive cell1.48e-0839
electrically active cell1.48e-0839







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