FFCP PHASE1:Mm9::chr6:128958807..128958818,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=153|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:128958807..128958818,+|id=chr6:128958807..128958818,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.02e-08,3;CL:0002202,1.02e-08,3;CL:0000069,1.02e-08,3;CL:0002632,1.02e-08,3;CL:0002368,1.02e-08,3;CL:0000307,1.02e-08,3;CL:0000377,1.02e-08,3;CL:0002027,4.69e-08,3;CL:0002006,4.69e-08,3;CL:0002024,4.69e-08,3;CL:0000049,8.16e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003100!1.40e-08!11;UBERON:0007023!7.30e-08!51|ontology_enrichment_uberon_v019_2=UBERON:0003100,3.03e-14,11;UBERON:0000474,5.94e-10,9;UBERON:0007023,4.71e-09,51;UBERON:0003126,1.02e-08,3;UBERON:0001005,1.02e-08,3;UBERON:0007196,1.02e-08,3;UBERON:0001558,1.02e-08,3;UBERON:0003975,1.29e-08,5;UBERON:0003134,6.36e-08,8;UBERON:0000014,1.37e-07,5;UBERON:0001003,1.37e-07,5;UBERON:0002097,1.37e-07,5;UBERON:0002199,1.37e-07,5;UBERON:0007029,1.37e-07,5;UBERON:0007376,1.37e-07,5;UBERON:0002416,1.37e-07,5;UBERON:0007383,1.37e-07,5;UBERON:0004175,8.37e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,2.42970320867791,2.09868563438444,0.157731082679119,0.137114433605739,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0.7813353445238,0,1.17646297606203,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,10.6080610095495,7.34743609877786,7.07734223020697,0.34255163915718,2.33044095282455,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0,0.220841518460394,0,0,0,0,0.255457055208591,1.55759661857696,2.39961092397363,1.52484272487678,0,0,0,0.173824320192276,0,0,0.162241263067758,0.203678727700633,0.124406970610093,1.26361379216837,0.631325567659422,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,2.1066395619397,1.80143534980301,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.738050739898011,0.470996183524124,0.493588655687202,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0,0,0,0,24.5882136509518,4.96686143348518,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,2.41298144854057,0,0.162886959353576,9.73323725537959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0,0,10.0580614294303,0.968786560175433,1.02531972377865,1.79058516004705,1.47726809770555,0,0,2.39219233116994,0,0,0,0.27338845544205,0.686334519619568,1.5298058699447,0.419854356970974,1.24379976423981,1.90934123603023,0,0,0,0,1.09181281873089,2.56242258131159,1.57041565878138,9.16145796944104,0,1.24267862617385,0,0.149516546043979,0,0,0,0,0,0,0.209718688851422,0.241584120826006,0,0.632022241256357,0,0,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,4.0811469050738,0.221985953374065,0,0,0.386379188064381,15.9530104133505,23.0771046576754,33.6558355154133,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr6:128958807..128958818,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=153 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:128958807..128958818,+ | |||
|id=chr6:128958807..128958818,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.02e-08,3;CL:0002202,1.02e-08,3;CL:0000069,1.02e-08,3;CL:0002632,1.02e-08,3;CL:0002368,1.02e-08,3;CL:0000307,1.02e-08,3;CL:0000377,1.02e-08,3;CL:0002027,4.69e-08,3;CL:0002006,4.69e-08,3;CL:0002024,4.69e-08,3;CL:0000049,8.16e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!1.40e-08!11;UBERON:0007023!7.30e-08!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003100,3.03e-14,11;UBERON:0000474,5.94e-10,9;UBERON:0007023,4.71e-09,51;UBERON:0003126,1.02e-08,3;UBERON:0001005,1.02e-08,3;UBERON:0007196,1.02e-08,3;UBERON:0001558,1.02e-08,3;UBERON:0003975,1.29e-08,5;UBERON:0003134,6.36e-08,8;UBERON:0000014,1.37e-07,5;UBERON:0001003,1.37e-07,5;UBERON:0002097,1.37e-07,5;UBERON:0002199,1.37e-07,5;UBERON:0007029,1.37e-07,5;UBERON:0007376,1.37e-07,5;UBERON:0002416,1.37e-07,5;UBERON:0007383,1.37e-07,5;UBERON:0004175,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,2.42970320867791,2.09868563438444,0.157731082679119,0.137114433605739,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.418531630736908,0.7813353445238,0,1.17646297606203,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,10.6080610095495,7.34743609877786,7.07734223020697,0.34255163915718,2.33044095282455,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0,0.220841518460394,0,0,0,0,0.255457055208591,1.55759661857696,2.39961092397363,1.52484272487678,0,0,0,0.173824320192276,0,0,0.162241263067758,0.203678727700633,0.124406970610093,1.26361379216837,0.631325567659422,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,2.1066395619397,1.80143534980301,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.738050739898011,0.470996183524124,0.493588655687202,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0,0,0,0,24.5882136509518,4.96686143348518,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,2.41298144854057,0,0.162886959353576,9.73323725537959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0,0,10.0580614294303,0.968786560175433,1.02531972377865,1.79058516004705,1.47726809770555,0,0,2.39219233116994,0,0,0,0.27338845544205,0.686334519619568,1.5298058699447,0.419854356970974,1.24379976423981,1.90934123603023,0,0,0,0,1.09181281873089,2.56242258131159,1.57041565878138,9.16145796944104,0,1.24267862617385,0,0.149516546043979,0,0,0,0,0,0,0.209718688851422,0.241584120826006,0,0.632022241256357,0,0,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,4.0811469050738,0.221985953374065,0,0,0.386379188064381,15.9530104133505,23.0771046576754,33.6558355154133,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr6:128958807..128958818,+ | |||
}} |
Revision as of 09:03, 14 September 2013
Short description: | p@chr6:128958807..128958818, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:128958807..128958818, + |
Coexpression cluster: | MCL_coexpression_mm9:153 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.02e-08 | 3 |
epithelial cell of tracheobronchial tree | 1.02e-08 | 3 |
branched duct epithelial cell | 1.02e-08 | 3 |
epithelial cell of lower respiratory tract | 1.02e-08 | 3 |
respiratory epithelial cell | 1.02e-08 | 3 |
tracheal epithelial cell | 1.02e-08 | 3 |
tracheoblast | 1.02e-08 | 3 |
CD9-positive, CD41-positive megakaryocyte cell | 4.69e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.69e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.69e-08 | 3 |
common myeloid progenitor | 8.16e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
female organism | 3.03e-14 | 11 |
female reproductive system | 5.94e-10 | 9 |
adult organism | 4.71e-09 | 51 |
trachea | 1.02e-08 | 3 |
respiratory airway | 1.02e-08 | 3 |
tracheobronchial tree | 1.02e-08 | 3 |
lower respiratory tract | 1.02e-08 | 3 |
internal female genitalia | 1.29e-08 | 5 |
female reproductive organ | 6.36e-08 | 8 |
zone of skin | 1.37e-07 | 5 |
skin epidermis | 1.37e-07 | 5 |
skin of body | 1.37e-07 | 5 |
integument | 1.37e-07 | 5 |
surface | 1.37e-07 | 5 |
outer epithelium | 1.37e-07 | 5 |
integumental system | 1.37e-07 | 5 |
enveloping layer of ectoderm | 1.37e-07 | 5 |
internal genitalia | 8.37e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.