FFCP PHASE1:Mm9::chr6:38484833..38484872,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66117|HGNC=|MCL_coexpression_id=282|UniProt=Q9CR13|association_with_transcript=0bp_to_NM_025363,uc009bki.1_5end|description=CAGE_peak_1_at_1110001J03Rik_5end|id=chr6:38484833..38484872,+|ontology_enrichment_celltype=CL:0000117!1.55e-07!23;CL:0000337!1.55e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.55e-07,23;CL:0000337,1.55e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!2.83e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0003103,2.83e-07,43|phase1_expression=16.335182404689,22.6834014965585,27.7549536027617,27.8267074402284,31.0555352566735,21.8243053485457,15.8856595604957,8.26389270026088,3.23814060948833,2.10658073689794,8.73211637950075,12.8433175982492,11.8128503652532,9.52882386367072,12.6581709489952,15.7930708564064,21.6864182219725,14.6689906891581,14.9454732630255,21.2194825899015,17.093701320365,16.8794617041505,21.6795824985316,18.079143775655,23.6291559499185,39.6220055239364,47.3838195774982,30.8123862740821,34.0141920826909,49.1458753031865,31.264002002398,20.9560122241678,9.84103660135312,15.8481681015439,45.9274075404527,55.5223715497364,43.8964115964094,11.7188856606334,25.0027310247616,16.7527598071615,7.05877785637217,11.6117732442936,10.1957174136542,2.89562681343828,3.14268486780495,5.32285581268876,12.5182615095686,20.0583143870011,20.8701873597748,11.4713640453827,7.69925318939494,28.7505128729943,12.5836954543302,10.8804321301702,5.71359458542189,6.68874533693462,6.01720223871389,10.8291139378263,26.7057728334669,25.3915670050576,22.8179305262225,15.5868484751801,9.78224275722253,9.44894703145469,14.8329954385046,15.6305625288142,25.4660093940644,31.1216827310459,11.716926190858,20.6559085647487,14.0917724105426,49.9889222706656,46.8241306817421,13.1065155160001,10.0637744569148,19.3035945188104,25.3266526298594,24.2605942361857,27.9563890526363,24.7946220932764,21.9570344645783,30.7338888628488,47.4611098302348,41.0816705323126,26.7396933609418,37.1232017696821,32.4607432221955,32.247104127777,7.42116694665204,4.60986516651392,14.2033599463822,73.1360295434178,29.918738683141,51.8115063972304,40.2861378817555,31.8099089839108,27.3866619256916,4.09032774187339,13.2490862347463,14.4869225549239,23.0983208433756,8.98285341900225,10.1922095882658,7.11066703153331,16.2368280758411,15.454951793981,13.1436355703844,30.487095884989,4.14300613835475,12.3206975423805,12.3174582003956,8.8294988710521,12.4532368518272,15.976599898578,7.64326596382081,23.8766523526383,3.46072954828123,27.6184771717031,10.6153266233985,15.6913844448987,13.471332626084,13.5765070877862,5.59175283654366,15.8101630386235,18.431310199584,18.3929079750186,39.5389910869537,34.7943583976176,39.0105597114309,15.5782264981016,10.980014467647,11.8115090986093,12.8629996942285,11.2514801225345,18.4931359658008,10.2211995732687,8.04530974417499,12.6895110022295,11.625246887949,11.3638602178696,11.1903580947925,18.1622662502444,8.46292010085141,10.2479276128286,6.32739442107349,8.07116437794554,13.2119431629218,6.72628763921441,6.89817577385095,3.02569728268511,5.80638709741031,7.89104636739269,8.61946472599353,8.00979983000983,6.37924622864625,8.95654200683219,16.1509033082044,23.9333553616685,43.7611789069213,18.6413195281952,24.6252362980151,30.0703642639895,17.992599904476,30.1049274573528,43.9661271729028,38.1355669390669,54.9960472869219,37.4816748998614,52.1654724225733,48.5935693674122,41.2640240588406,65.4975943665489,33.3716175242397,41.2013705594341,10.7247873767705,7.71784592844633,11.2342386214491,11.6358249331959,9.59797127408553,8.82499353069666,8.24751752461397,8.47070803418039,12.6755484991576,11.223311940641,18.9811624617805,9.55253937399263,9.0480675168097,9.54991065797524,9.94316844307513,15.2799299471218,16.2103537406021,17.3252907731299,9.293727146701,11.3106027483632,11.270773567308,15.0701982605533,17.6496763322539,15.0090654565282,19.7297995827683,33.3598934433901,38.7786857768196,33.0704399310425,29.6452627087149,8.17541018008861,11.2038627214526,8.54476027062444,9.33156558387113,10.3706178693539,19.0969388836065,18.7002489343027,15.5649817704034,22.2394744682346,15.814502718009,10.4199465347181,28.395428253425,26.2682033064996,25.2950353065896,30.8763853672555,5.72734889516475,13.8328730592454,5.21487924614483,9.67546988918572,13.3773441524446,6.53274404023081,4.99891645860629,7.80534591431195,4.25614889086716,5.3151525515706,8.6105575075043,8.68475567993411,8.80693407516067,5.93061140184197,9.04747703635634,13.053736411649,10.8188140064188,11.0374698521893,14.1284519189257,13.83097901788,5.57378814280696,37.8706390806559,11.6738041184015,13.6653560503823,6.03185513651837,5.01834475700359,5.34716817797746,7.35998980050964,9.31064613852257,10.5212108848072,2.76701444562566,18.9579576688866,12.2068473279111,10.5058706163681,4.88660878060728,10.3931177472697,7.96470830039777,11.4106898992841,19.9533547596736,17.3516673375426,9.7449624650655,9.22305443831782,5.16856586336442,8.72480950746013,14.616392513773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| ||
|EntrezGene=66117 | |||
|HGNC= | |||
|MCL_coexpression_id=282 | |||
|UniProt=Q9CR13 | |||
|association_with_transcript=0bp_to_NM_025363,uc009bki.1_5end | |||
|description=CAGE_peak_1_at_1110001J03Rik_5end | |||
|id=chr6:38484833..38484872,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.55e-07!23;CL:0000337!1.55e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.55e-07,23;CL:0000337,1.55e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!2.83e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,2.83e-07,43 | |||
|phase1_expression=16.335182404689,22.6834014965585,27.7549536027617,27.8267074402284,31.0555352566735,21.8243053485457,15.8856595604957,8.26389270026088,3.23814060948833,2.10658073689794,8.73211637950075,12.8433175982492,11.8128503652532,9.52882386367072,12.6581709489952,15.7930708564064,21.6864182219725,14.6689906891581,14.9454732630255,21.2194825899015,17.093701320365,16.8794617041505,21.6795824985316,18.079143775655,23.6291559499185,39.6220055239364,47.3838195774982,30.8123862740821,34.0141920826909,49.1458753031865,31.264002002398,20.9560122241678,9.84103660135312,15.8481681015439,45.9274075404527,55.5223715497364,43.8964115964094,11.7188856606334,25.0027310247616,16.7527598071615,7.05877785637217,11.6117732442936,10.1957174136542,2.89562681343828,3.14268486780495,5.32285581268876,12.5182615095686,20.0583143870011,20.8701873597748,11.4713640453827,7.69925318939494,28.7505128729943,12.5836954543302,10.8804321301702,5.71359458542189,6.68874533693462,6.01720223871389,10.8291139378263,26.7057728334669,25.3915670050576,22.8179305262225,15.5868484751801,9.78224275722253,9.44894703145469,14.8329954385046,15.6305625288142,25.4660093940644,31.1216827310459,11.716926190858,20.6559085647487,14.0917724105426,49.9889222706656,46.8241306817421,13.1065155160001,10.0637744569148,19.3035945188104,25.3266526298594,24.2605942361857,27.9563890526363,24.7946220932764,21.9570344645783,30.7338888628488,47.4611098302348,41.0816705323126,26.7396933609418,37.1232017696821,32.4607432221955,32.247104127777,7.42116694665204,4.60986516651392,14.2033599463822,73.1360295434178,29.918738683141,51.8115063972304,40.2861378817555,31.8099089839108,27.3866619256916,4.09032774187339,13.2490862347463,14.4869225549239,23.0983208433756,8.98285341900225,10.1922095882658,7.11066703153331,16.2368280758411,15.454951793981,13.1436355703844,30.487095884989,4.14300613835475,12.3206975423805,12.3174582003956,8.8294988710521,12.4532368518272,15.976599898578,7.64326596382081,23.8766523526383,3.46072954828123,27.6184771717031,10.6153266233985,15.6913844448987,13.471332626084,13.5765070877862,5.59175283654366,15.8101630386235,18.431310199584,18.3929079750186,39.5389910869537,34.7943583976176,39.0105597114309,15.5782264981016,10.980014467647,11.8115090986093,12.8629996942285,11.2514801225345,18.4931359658008,10.2211995732687,8.04530974417499,12.6895110022295,11.625246887949,11.3638602178696,11.1903580947925,18.1622662502444,8.46292010085141,10.2479276128286,6.32739442107349,8.07116437794554,13.2119431629218,6.72628763921441,6.89817577385095,3.02569728268511,5.80638709741031,7.89104636739269,8.61946472599353,8.00979983000983,6.37924622864625,8.95654200683219,16.1509033082044,23.9333553616685,43.7611789069213,18.6413195281952,24.6252362980151,30.0703642639895,17.992599904476,30.1049274573528,43.9661271729028,38.1355669390669,54.9960472869219,37.4816748998614,52.1654724225733,48.5935693674122,41.2640240588406,65.4975943665489,33.3716175242397,41.2013705594341,10.7247873767705,7.71784592844633,11.2342386214491,11.6358249331959,9.59797127408553,8.82499353069666,8.24751752461397,8.47070803418039,12.6755484991576,11.223311940641,18.9811624617805,9.55253937399263,9.0480675168097,9.54991065797524,9.94316844307513,15.2799299471218,16.2103537406021,17.3252907731299,9.293727146701,11.3106027483632,11.270773567308,15.0701982605533,17.6496763322539,15.0090654565282,19.7297995827683,33.3598934433901,38.7786857768196,33.0704399310425,29.6452627087149,8.17541018008861,11.2038627214526,8.54476027062444,9.33156558387113,10.3706178693539,19.0969388836065,18.7002489343027,15.5649817704034,22.2394744682346,15.814502718009,10.4199465347181,28.395428253425,26.2682033064996,25.2950353065896,30.8763853672555,5.72734889516475,13.8328730592454,5.21487924614483,9.67546988918572,13.3773441524446,6.53274404023081,4.99891645860629,7.80534591431195,4.25614889086716,5.3151525515706,8.6105575075043,8.68475567993411,8.80693407516067,5.93061140184197,9.04747703635634,13.053736411649,10.8188140064188,11.0374698521893,14.1284519189257,13.83097901788,5.57378814280696,37.8706390806559,11.6738041184015,13.6653560503823,6.03185513651837,5.01834475700359,5.34716817797746,7.35998980050964,9.31064613852257,10.5212108848072,2.76701444562566,18.9579576688866,12.2068473279111,10.5058706163681,4.88660878060728,10.3931177472697,7.96470830039777,11.4106898992841,19.9533547596736,17.3516673375426,9.7449624650655,9.22305443831782,5.16856586336442,8.72480950746013,14.6163925137736,12.9575070753685,8.4334886859999,12.3762651897824,9.19186935535228,12.0640933000978,11.7716402242307,12.8602221018955,5.14286677562593,11.5939731441346,9.54384319492302,11.8741330154694,5.16277757740163,8.89694697628045,12.3495902910779,7.58476763530808,5.32832608096488,7.59942854094764,5.84924485615369,3.28281799490123,15.1570035047522,13.7214723487777,8.20180227829693,10.1129565301979,9.07453184111587,7.53473828018764,8.61173634642459,9.15112692826091,20.5673900292565,20.852766396225,16.0311969613132,16.2294005062569,8.066567836318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| |||
|short_description=p1@1110001J03Rik | |||
}} | |||
Revision as of 09:45, 14 September 2013
| Short description: | p1@1110001J03Rik |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_1110001J03Rik_5end |
| Coexpression cluster: | MCL_coexpression_mm9:282 |
| Association with transcript: | 0bp_to_NM_025363, uc009bki.1_5end |
| EntrezGene: | 1110001J03Rik |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.55e-07 | 23 |
| neuroblast (sensu Vertebrata) | 1.55e-07 | 23 |
| Ontology term | p-value | n |
|---|---|---|
| compound organ | 2.83e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
