FFCP PHASE1:Mm9::chr6:68967122..68967129,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=63|UniProt=|association_with_transcript=-48bp_to_ENSMUST00000103341_5end|description=CAGE_peak_1_at_ENSMUST00000103341_5end|id=chr6:68967122..68967129,-|ontology_enrichment_celltype=CL:0000553!3.32e-16!6;CL:0000556!3.32e-16!6;CL:0000050!1.55e-10!9;CL:0002027!8.71e-09!3;CL:0002006!8.71e-09!3;CL:0002024!8.71e-09!3;CL:0000414!1.79e-08!11;CL:0000839!4.80e-07!13|ontology_enrichment_celltype_v019_2=CL:0000553,3.36e-35,6;CL:0000556,3.36e-35,6;CL:0000050,2.09e-23,9;CL:0002027,4.01e-18,3;CL:0002006,4.01e-18,3;CL:0002024,4.01e-18,3;CL:0000839,3.97e-16,13;CL:0000763,4.77e-13,16;CL:0002031,5.13e-11,25;CL:0000049,6.19e-11,19;CL:0000988,1.79e-08,32;CL:0002032,1.79e-08,32;CL:0000037,1.79e-08,32;CL:0000837,1.79e-08,32;CL:0000945,4.83e-07,1;CL:0000236,4.83e-07,1;CL:0000826,4.83e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!3.79e-09!3;UBERON:0002193!4.43e-09!48;UBERON:0007023!8.84e-08!51|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.95e-19,3;UBERON:0002193,9.11e-14,48;UBERON:0002405,9.11e-14,48;UBERON:0002371,4.77e-13,16;UBERON:0001962,5.55e-13,2;UBERON:0001961,5.55e-13,2;UBERON:0001744,5.55e-13,2;UBERON:0001474,2.15e-09,22;UBERON:0004765,2.15e-09,22;UBERON:0001434,2.15e-09,22;UBERON:0000029,1.20e-07,1;UBERON:0001097,1.20e-07,1;UBERON:0003968,1.20e-07,1;UBERON:0001467,1.20e-07,1;UBERON:0002390,1.26e-07,45;UBERON:0003061,1.26e-07,45;UBERON:0003199,1.59e-07,1;UBERON:0001044,2.43e-07,1;UBERON:0001736,2.43e-07,1;UBERON:0003293,2.43e-07,1;UBERON:0003294,2.43e-07,1;UBERON:0001829,2.43e-07,1;UBERON:0010047,2.43e-07,1;UBERON:0000167,2.43e-07,1;UBERON:0006298,2.43e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3297561890506,4.45445588257617,1.39912375625629,6.46697438984387,6.99283611389268,3.39511721438424,0.340173160604279,0,0,3.19984845586813,8.71755268055246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02008690903925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,54.3769555659061,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22702756308404,0,0,0,0.27338845544205,0.457556346413045,0,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,5.59205381778233,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000103341}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt= | |||
|association_with_transcript=-48bp_to_ENSMUST00000103341_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103341_5end | |||
|id=chr6:68967122..68967129,- | |||
|ontology_enrichment_celltype=CL:0000553!3.32e-16!6;CL:0000556!3.32e-16!6;CL:0000050!1.55e-10!9;CL:0002027!8.71e-09!3;CL:0002006!8.71e-09!3;CL:0002024!8.71e-09!3;CL:0000414!1.79e-08!11;CL:0000839!4.80e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.36e-35,6;CL:0000556,3.36e-35,6;CL:0000050,2.09e-23,9;CL:0002027,4.01e-18,3;CL:0002006,4.01e-18,3;CL:0002024,4.01e-18,3;CL:0000839,3.97e-16,13;CL:0000763,4.77e-13,16;CL:0002031,5.13e-11,25;CL:0000049,6.19e-11,19;CL:0000988,1.79e-08,32;CL:0002032,1.79e-08,32;CL:0000037,1.79e-08,32;CL:0000837,1.79e-08,32;CL:0000945,4.83e-07,1;CL:0000236,4.83e-07,1;CL:0000826,4.83e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!3.79e-09!3;UBERON:0002193!4.43e-09!48;UBERON:0007023!8.84e-08!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.95e-19,3;UBERON:0002193,9.11e-14,48;UBERON:0002405,9.11e-14,48;UBERON:0002371,4.77e-13,16;UBERON:0001962,5.55e-13,2;UBERON:0001961,5.55e-13,2;UBERON:0001744,5.55e-13,2;UBERON:0001474,2.15e-09,22;UBERON:0004765,2.15e-09,22;UBERON:0001434,2.15e-09,22;UBERON:0000029,1.20e-07,1;UBERON:0001097,1.20e-07,1;UBERON:0003968,1.20e-07,1;UBERON:0001467,1.20e-07,1;UBERON:0002390,1.26e-07,45;UBERON:0003061,1.26e-07,45;UBERON:0003199,1.59e-07,1;UBERON:0001044,2.43e-07,1;UBERON:0001736,2.43e-07,1;UBERON:0003293,2.43e-07,1;UBERON:0003294,2.43e-07,1;UBERON:0001829,2.43e-07,1;UBERON:0010047,2.43e-07,1;UBERON:0000167,2.43e-07,1;UBERON:0006298,2.43e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3297561890506,4.45445588257617,1.39912375625629,6.46697438984387,6.99283611389268,3.39511721438424,0.340173160604279,0,0,3.19984845586813,8.71755268055246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02008690903925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,54.3769555659061,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22702756308404,0,0,0,0.27338845544205,0.457556346413045,0,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,5.59205381778233,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000103341 | |||
}} |
Revision as of 10:29, 14 September 2013
Short description: | p1@ENSMUST00000103341 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103341_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | -48bp_to_ENSMUST00000103341_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.36e-35 | 6 |
megakaryocyte | 3.36e-35 | 6 |
megakaryocyte-erythroid progenitor cell | 2.09e-23 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 4.01e-18 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.01e-18 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.01e-18 | 3 |
myeloid lineage restricted progenitor cell | 3.97e-16 | 13 |
myeloid cell | 4.77e-13 | 16 |
hematopoietic lineage restricted progenitor cell | 5.13e-11 | 25 |
common myeloid progenitor | 6.19e-11 | 19 |
hematopoietic cell | 1.79e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.79e-08 | 32 |
hematopoietic stem cell | 1.79e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.79e-08 | 32 |
lymphocyte of B lineage | 4.83e-07 | 1 |
B cell | 4.83e-07 | 1 |
pro-B cell | 4.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 5.95e-19 | 3 |
hemolymphoid system | 9.11e-14 | 48 |
immune system | 9.11e-14 | 48 |
bone marrow | 4.77e-13 | 16 |
gut-associated lymphoid tissue | 5.55e-13 | 2 |
mucosa-associated lymphoid tissue | 5.55e-13 | 2 |
lymphoid tissue | 5.55e-13 | 2 |
bone element | 2.15e-09 | 22 |
skeletal element | 2.15e-09 | 22 |
skeletal system | 2.15e-09 | 22 |
lymph node | 1.20e-07 | 1 |
axillary lymph node | 1.20e-07 | 1 |
peripheral lymph node | 1.20e-07 | 1 |
shoulder | 1.20e-07 | 1 |
hematopoietic system | 1.26e-07 | 45 |
blood island | 1.26e-07 | 45 |
egg chamber | 1.59e-07 | 1 |
saliva-secreting gland | 2.43e-07 | 1 |
submandibular gland | 2.43e-07 | 1 |
gland of oral region | 2.43e-07 | 1 |
gland of foregut | 2.43e-07 | 1 |
major salivary gland | 2.43e-07 | 1 |
oral gland | 2.43e-07 | 1 |
oral cavity | 2.43e-07 | 1 |
submandibular gland primordium | 2.43e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.