Personal tools

FFCP PHASE1:Mm9::chr6:91928845..91928907,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=232237|HGNC=|MCL_coexpression_id=181|UniProt=E9QKY4,Q571N6|association_with_transcript=0bp_to_ENSMUST00000089334,uc009cym.1_5end|description=CAGE_peak_1_at_Fgd5_5end|id=chr6:91928845..91928907,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!5.84e-12!85;UBERON:0002048!6.63e-09!14;UBERON:0000117!6.63e-09!14;UBERON:0000171!6.63e-09!14;UBERON:0000170!6.63e-09!14;UBERON:0005597!6.63e-09!14;UBERON:0000118!6.63e-09!14;UBERON:0000468!1.59e-08!333;UBERON:0009569!1.77e-08!66;UBERON:0003103!2.43e-08!43;UBERON:0002100!2.86e-07!98;UBERON:0005153!4.83e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.67e-10,79;UBERON:0002048,5.04e-09,14;UBERON:0000117,5.04e-09,14;UBERON:0000171,5.04e-09,14;UBERON:0000170,5.04e-09,14;UBERON:0005597,5.04e-09,14;UBERON:0000118,5.04e-09,14;UBERON:0003103,2.03e-08,43;UBERON:0009569,2.74e-08,66;UBERON:0005153,6.92e-07,17|phase1_expression=1.76163731815273,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,2.33176833270964,2.63217847606774,0,0,0.137114433605739,0,6.37824676133023,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,1.54355661621568,1.71920063963254,0,4.24864567805155,2.64495489636016,5.70448263155561,0,0,0,0,0,0,0,2.28117147078651,1.62007125998029,1.05162480675691,8.56952953211411,6.62605622854841,3.06226998037385,2.87536413054709,4.5960939330501,2.20231761998777,2.29837208553338,1.99688493233117,4.87979264601717,3.93396867490361,2.6045668527838,0.558365998002762,3.37657566019008,3.36156145108982,9.72274332063103,7.83044244395066,8.38797506213853,0.832988126665025,2.11600368298999,102.322164511692,26.673140186423,0,1.07940638327563,0.649776417447669,0.896053774194671,3.5111105032938,0,0,0,3.38024207464033,0,0,0,0,0,0,3.65388415100992,4.40194402200192,6.67989625791711,8.15381035800839,6.69824052286711,7.14908041493781,7.38540938707851,7.4080885495494,7.03732911446183,6.92145909656247,7.22996784599558,2.65383165584962,7.44127509758082,7.95029466457417,5.81850303762267,0,0.878342391034642,2.30391377494801,2.29911349687732,0.11981512450592,0.599902730993408,0,3.2953940669061,1.83000241127451,4.39790232395025,1.56441888173049,3.06858548796397,2.0778804455956,2.43361894601636,6.61955865027056,3.98102305952298,0.758168275301024,1.89397670297827,2.08192708740326,0.459804208866946,1.0803727788321,4.06903008156431,4.08218994907967,2.0498195245576,3.46696380870997,2.32833033665114,1.07783996466421,2.83659120251729,4.57472922826267,2.19195732427575,6.39508673218875,6.61679116392116,8.0255033199098,4.17971960318836,0,0,0,7.66365358381357,3.51789089971644,7.74266864282364,7.57583153872673,10.231740050865,7.25055430570678,8.60375595576509,8.85302224618743,12.37712629092,9.54447129498187,12.148392341853,19.132239052822,18.4211984155919,12.2948064562988,20.5335820703369,0.841159794256509,2.6755199218614,0.330418782983798,1.05780226665418,3.41261200856374,8.36052018697579,3.8660238396628,3.42861991859682,4.22518283305254,3.80451252225118,0.949058123089023,3.95277491337626,1.75934646160189,3.58121649674071,3.11942539390592,1.79763881730844,2.37751854862164,1.99141273254367,3.79335801906163,8.22589290790047,11.270773567308,9.77526373657508,11.6371492300575,13.7466206985024,14.2282208529579,9.74226976665374,9.57692239832386,7.65062416315163,2.96452627087149,3.33690211432188,2.35870794135844,1.57403478669398,2.23146133527353,3.61765739628625,2.5462585178142,4.60313819921297,3.24270453550071,2.19649130550465,2.87536413054709,2.23284568601102,8.7370548472077,4.54641980304801,4.84373016509163,5.30687873499704,18.6600722068271,4.73728529426212,7.49638891633319,8.48725428875941,8.44884893838608,17.0856382590652,18.8054476299951,22.4403695036469,16.8669604193624,18.1601045511995,30.6153155822375,20.4829143394672,19.3407179689803,21.9866569043898,0,0,2.95058563811422,2.20749397043786,1.60550589987792,3.5163505977661,0,12.3710754330143,0,0,0.215423397732799,0,0,0,0,0.876767573733936,0,0.642642632843614,5.25178315270594,6.94455854302295,6.02681749608232,3.95928295134085,3.98235415019888,4.12727081463468,2.41858845571801,3.77210159511796,4.72483028609236,7.37844355065426,7.49442050187841,11.6330793432802,6.41695281092498,4.42451461110142,5.27093042874994,5.15677716240934,3.74483566329167,2.70091641046965,4.01011919726539,2.7863814554107,5.32020700926821,5.52943334566419,5.92376474167636,5.48036908406279,7.97883807416615,5.08396970073168,0.882113592219848,4.9465875882444,7.58882805470756,5.30753739367772,3.46179797609096,3.28281799490123,2.91480836629851,1.66882771809459,1.87957968877638,13.2087595496462,8.33375373163703,3.57900068308913,3.14396723758358,2.28778173206523,3.73952545986482,1.39951452323658,3.31679937130617,0.954670618015114,2.68885594543965,2.43983360552218,3.24016022465404,1.88179466413022,4.14888871117737,3.50647300600534,5.20716771069616,3.92633912976044,2.07383957266869,2.4853572523477,0.56369293868419,4.33597983527538,3.64008679005615,4.86127970860119,4.00395452780966,2.70329800785245,3.28600268208111,2.73429208172295,3.98465508817701,0.483168241652012,2.30424005006292,1.26404448251271,5.27085559754427,4.5192821152524,2.33857481360031,3.04345382634718,2.98022032171897,1.80293174279953,1.62458479892035,1.81739609906666,1.21930890648,0.907435666231565,0.974578807397524,1.05833025804362,0.701261413089414,8.38902419376282,2.66383144048878,1.07656627931371,1.17519231454855,7.72758376128762,4.129014459926,3.6630324853453,1.71494703263253,0.501572104035363,0.564751842617067,0.920650473014354,0.572895513439397,2.23409137046794,0.685082519770642,1.5107877947794,0.675022500231806,1.35096360967266,1.35942722695261,0.51776031175182,1.764384908931,1.59609949360412,5.12200817262403,5.10524105843418,2.72497111416377,4.96377472815038,6.88964856185007,5.97501665992793,9.62757628775446,6.82282471762253,6.08350319736575,8.48818536237343,7.39767909012071,8.1311943554184,7.98353018483024,8.57328644309533,11.7043169204304,10.2241886845764,4.94503080963968,10.009526569139,7.88599280486455,6.56660482789549,5.48403236878838,6.1045494985578,8.18751609613376,9.7306799075428,9.3293266165114,7.89209134313529,8.82726739998101,6.73370725989286,10.5585166130515,11.1310065084387,10.2307760792422,8.36658942404216,6.36591816237767,5.74564329257276,7.01794825336225,4.72716318906256,7.26895661861605,8.6030653456611,7.88350641109433|short_description=p1@Fgd5}}
|EntrezGene=232237
|HGNC=
|MCL_coexpression_id=181
|UniProt=E9QKY4,Q571N6
|association_with_transcript=0bp_to_ENSMUST00000089334,uc009cym.1_5end
|description=CAGE_peak_1_at_Fgd5_5end
|id=chr6:91928845..91928907,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005177!5.84e-12!85;UBERON:0002048!6.63e-09!14;UBERON:0000117!6.63e-09!14;UBERON:0000171!6.63e-09!14;UBERON:0000170!6.63e-09!14;UBERON:0005597!6.63e-09!14;UBERON:0000118!6.63e-09!14;UBERON:0000468!1.59e-08!333;UBERON:0009569!1.77e-08!66;UBERON:0003103!2.43e-08!43;UBERON:0002100!2.86e-07!98;UBERON:0005153!4.83e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.67e-10,79;UBERON:0002048,5.04e-09,14;UBERON:0000117,5.04e-09,14;UBERON:0000171,5.04e-09,14;UBERON:0000170,5.04e-09,14;UBERON:0005597,5.04e-09,14;UBERON:0000118,5.04e-09,14;UBERON:0003103,2.03e-08,43;UBERON:0009569,2.74e-08,66;UBERON:0005153,6.92e-07,17
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,2.33176833270964,2.63217847606774,0,0,0.137114433605739,0,6.37824676133023,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,1.54355661621568,1.71920063963254,0,4.24864567805155,2.64495489636016,5.70448263155561,0,0,0,0,0,0,0,2.28117147078651,1.62007125998029,1.05162480675691,8.56952953211411,6.62605622854841,3.06226998037385,2.87536413054709,4.5960939330501,2.20231761998777,2.29837208553338,1.99688493233117,4.87979264601717,3.93396867490361,2.6045668527838,0.558365998002762,3.37657566019008,3.36156145108982,9.72274332063103,7.83044244395066,8.38797506213853,0.832988126665025,2.11600368298999,102.322164511692,26.673140186423,0,1.07940638327563,0.649776417447669,0.896053774194671,3.5111105032938,0,0,0,3.38024207464033,0,0,0,0,0,0,3.65388415100992,4.40194402200192,6.67989625791711,8.15381035800839,6.69824052286711,7.14908041493781,7.38540938707851,7.4080885495494,7.03732911446183,6.92145909656247,7.22996784599558,2.65383165584962,7.44127509758082,7.95029466457417,5.81850303762267,0,0.878342391034642,2.30391377494801,2.29911349687732,0.11981512450592,0.599902730993408,0,3.2953940669061,1.83000241127451,4.39790232395025,1.56441888173049,3.06858548796397,2.0778804455956,2.43361894601636,6.61955865027056,3.98102305952298,0.758168275301024,1.89397670297827,2.08192708740326,0.459804208866946,1.0803727788321,4.06903008156431,4.08218994907967,2.0498195245576,3.46696380870997,2.32833033665114,1.07783996466421,2.83659120251729,4.57472922826267,2.19195732427575,6.39508673218875,6.61679116392116,8.0255033199098,4.17971960318836,0,0,0,7.66365358381357,3.51789089971644,7.74266864282364,7.57583153872673,10.231740050865,7.25055430570678,8.60375595576509,8.85302224618743,12.37712629092,9.54447129498187,12.148392341853,19.132239052822,18.4211984155919,12.2948064562988,20.5335820703369,0.841159794256509,2.6755199218614,0.330418782983798,1.05780226665418,3.41261200856374,8.36052018697579,3.8660238396628,3.42861991859682,4.22518283305254,3.80451252225118,0.949058123089023,3.95277491337626,1.75934646160189,3.58121649674071,3.11942539390592,1.79763881730844,2.37751854862164,1.99141273254367,3.79335801906163,8.22589290790047,11.270773567308,9.77526373657508,11.6371492300575,13.7466206985024,14.2282208529579,9.74226976665374,9.57692239832386,7.65062416315163,2.96452627087149,3.33690211432188,2.35870794135844,1.57403478669398,2.23146133527353,3.61765739628625,2.5462585178142,4.60313819921297,3.24270453550071,2.19649130550465,2.87536413054709,2.23284568601102,8.7370548472077,4.54641980304801,4.84373016509163,5.30687873499704,18.6600722068271,4.73728529426212,7.49638891633319,8.48725428875941,8.44884893838608,17.0856382590652,18.8054476299951,22.4403695036469,16.8669604193624,18.1601045511995,30.6153155822375,20.4829143394672,19.3407179689803,21.9866569043898,0,0,2.95058563811422,2.20749397043786,1.60550589987792,3.5163505977661,0,12.3710754330143,0,0,0.215423397732799,0,0,0,0,0.876767573733936,0,0.642642632843614,5.25178315270594,6.94455854302295,6.02681749608232,3.95928295134085,3.98235415019888,4.12727081463468,2.41858845571801,3.77210159511796,4.72483028609236,7.37844355065426,7.49442050187841,11.6330793432802,6.41695281092498,4.42451461110142,5.27093042874994,5.15677716240934,3.74483566329167,2.70091641046965,4.01011919726539,2.7863814554107,5.32020700926821,5.52943334566419,5.92376474167636,5.48036908406279,7.97883807416615,5.08396970073168,0.882113592219848,4.9465875882444,7.58882805470756,5.30753739367772,3.46179797609096,3.28281799490123,2.91480836629851,1.66882771809459,1.87957968877638,13.2087595496462,8.33375373163703,3.57900068308913,3.14396723758358,2.28778173206523,3.73952545986482,1.39951452323658,3.31679937130617,0.954670618015114,2.68885594543965,2.43983360552218,3.24016022465404,1.88179466413022,4.14888871117737,3.50647300600534,5.20716771069616,3.92633912976044,2.07383957266869,2.4853572523477,0.56369293868419,4.33597983527538,3.64008679005615,4.86127970860119,4.00395452780966,2.70329800785245,3.28600268208111,2.73429208172295,3.98465508817701,0.483168241652012,2.30424005006292,1.26404448251271,5.27085559754427,4.5192821152524,2.33857481360031,3.04345382634718,2.98022032171897,1.80293174279953,1.62458479892035,1.81739609906666,1.21930890648,0.907435666231565,0.974578807397524,1.05833025804362,0.701261413089414,8.38902419376282,2.66383144048878,1.07656627931371,1.17519231454855,7.72758376128762,4.129014459926,3.6630324853453,1.71494703263253,0.501572104035363,0.564751842617067,0.920650473014354,0.572895513439397,2.23409137046794,0.685082519770642,1.5107877947794,0.675022500231806,1.35096360967266,1.35942722695261,0.51776031175182,1.764384908931,1.59609949360412,5.12200817262403,5.10524105843418,2.72497111416377,4.96377472815038,6.88964856185007,5.97501665992793,9.62757628775446,6.82282471762253,6.08350319736575,8.48818536237343,7.39767909012071,8.1311943554184,7.98353018483024,8.57328644309533,11.7043169204304,10.2241886845764,4.94503080963968,10.009526569139,7.88599280486455,6.56660482789549,5.48403236878838,6.1045494985578,8.18751609613376,9.7306799075428,9.3293266165114,7.89209134313529,8.82726739998101,6.73370725989286,10.5585166130515,11.1310065084387,10.2307760792422,8.36658942404216,6.36591816237767,5.74564329257276,7.01794825336225,4.72716318906256,7.26895661861605,8.6030653456611,7.88350641109433
|short_description=p1@Fgd5
}}

Revision as of 10:59, 14 September 2013

Short description:p1@Fgd5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Fgd5_5end
Coexpression cluster:MCL_coexpression_mm9:181
Association with transcript: 0bp_to_ENSMUST00000089334, uc009cym.1_5end
EntrezGene:Fgd5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Fgd5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.39
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3102.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F726.67
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D76.68
adrenal gland, embryo E14.CNhs11038.406-44C58.15
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I17.15
adrenal gland, embryo E18.CNhs11026.1262-18F57.39
adrenal gland, neonate N00.CNhs11191.1311-23C17.41
adrenal gland, neonate N25.CNhs11223.1377-27I37.04
amnion, adult pregnant day17.5.CNhs10488.583-22A86.92
aorta, adult.CNhs10498.46-23H17.23
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A67.95
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.62
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C64.08
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B58.03
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E97.66
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I97.74
heart, embryo E14.CNhs10597.403-26D47.58
heart, embryo E15.CNhs11017.431-16C810.23
heart, embryo E16.CNhs11021.457-17C67.25
heart, embryo E17.CNhs11025.479-18E58.60
heart, embryo E18.CNhs11030.1283-20G38.85
heart, neonate N00.CNhs11213.639-21E312.38
heart, neonate N03.CNhs11221.1349-25I29.54
heart, neonate N10.CNhs11118.749-24G112.15
heart, neonate N16.CNhs11209.782-15G119.13
heart, neonate N20.CNhs11127.821-26I618.42
heart, neonate N25.CNhs11196.1351-25D312.29
heart, neonate N30.CNhs11202.1390-42D220.53
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D58.36
intestine, embryo E15.CNhs10602.976-16D83.87
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F88.23
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I29.78
kidney, embryo E18.CNhs11001.1288-20C711.64
kidney, neonate N00.CNhs11214.646-21G713.75
kidney, neonate N10.CNhs11206.758-6D514.23
kidney, neonate N20.CNhs11113.832-19I19.74
kidney, neonate N25.CNhs11122.1353-25F39.58
kidney, neonate N30.CNhs11203.1385-42H17.65
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B98.74
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B118.66
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F87.50
lung, embryo E15.CNhs11020.432-17C58.49
lung, embryo E16.CNhs10998.458-17B68.45
lung, embryo E17.CNhs10605.480-44A617.09
lung, embryo E18.CNhs10583.1287-20I618.81
lung, neonate N00.CNhs11224.640-42C622.44
lung, neonate N06.CNhs11212.683-20E516.87
lung, neonate N07.CNhs11111.715-19A318.16
lung, neonate N10.CNhs11219.750-23E630.62
lung, neonate N20.CNhs11109.822-18A420.48
lung, neonate N25.CNhs11119.1359-25C719.34
lung, neonate N30.CNhs11133.1394-42H221.99
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.37
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H76.94
ovary, neonate N00.CNhs11217.1299-22I46.03
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G97.49
pancreas, neonate N01.CNhs11138.1531-43D711.63
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C74.01
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I77.98
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C34.95
skin, neonate N00.CNhs11124.650-25G47.59
skin, neonate N03.CNhs11215.662-22H35.31
skin, neonate N06.CNhs11097.693-20I53.46
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C113.21
spleen, embryo E18.CNhs11011.1271-21F28.33
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C64.15
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A95.21
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.34
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I54.00
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D93.98
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I45.27
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D31.22
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B48.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.22
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.37
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D18.60
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element2.67e-1079
lung5.04e-0914
respiratory tube5.04e-0914
respiration organ5.04e-0914
pair of lungs5.04e-0914
lung primordium5.04e-0914
lung bud5.04e-0914
compound organ2.03e-0843
subdivision of trunk2.74e-0866
epithelial bud6.92e-0717







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:91928845..91928907,%2B&oldid=3038738"