FFCP PHASE1:Mm9::chr7:133343929..133343982,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74204|HGNC=|MCL_coexpression_id=36|UniProt=|association_with_transcript=0bp_to_ENSMUST00000167268_5end|description=CAGE_peak_1_at_Xpo6_5end|id=chr7:133343929..133343982,-|ontology_enrichment_celltype=CL:0000791!2.28e-07!9;CL:0000789!2.28e-07!9;CL:0002420!2.28e-07!9;CL:0002419!2.28e-07!9;CL:0000790!2.28e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,2.28e-07,9;CL:0000789,2.28e-07,9;CL:0002420,2.28e-07,9;CL:0002419,2.28e-07,9;CL:0000790,2.28e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!6.55e-15!94;UBERON:0007811!4.96e-14!86;UBERON:0004177!3.74e-08!29;UBERON:0001017!1.37e-07!73;UBERON:0005743!1.37e-07!73;UBERON:0002370!1.40e-07!23;UBERON:0000974!1.40e-07!23;UBERON:0004807!1.40e-07!23;UBERON:0005058!1.40e-07!23;UBERON:0003351!1.40e-07!23;UBERON:0009113!1.40e-07!23;UBERON:0003295!1.40e-07!23;UBERON:0009722!1.40e-07!23;UBERON:0005562!1.40e-07!23;UBERON:0007690!1.40e-07!23;UBERON:0002346!1.57e-07!71;UBERON:0003075!1.57e-07!71;UBERON:0007284!1.57e-07!71;UBERON:0000033!1.76e-07!63;UBERON:0001049!2.77e-07!52;UBERON:0005068!2.77e-07!52;UBERON:0006241!2.77e-07!52;UBERON:0007135!2.77e-07!52;UBERON:0000073!2.90e-07!75;UBERON:0001016!2.90e-07!75;UBERON:0003408!3.53e-07!24;UBERON:0004121!3.80e-07!102;UBERON:0000924!3.80e-07!102;UBERON:0006601!3.80e-07!102;UBERON:0000955!4.58e-07!50;UBERON:0006238!4.58e-07!50;UBERON:0003056!8.87e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.74e-08,29;UBERON:0005057,3.74e-08,29;UBERON:0000073,7.03e-08,54;UBERON:0002346,7.81e-08,64;UBERON:0003075,7.81e-08,64;UBERON:0007284,7.81e-08,64;UBERON:0001017,1.37e-07,73;UBERON:0002370,1.40e-07,23;UBERON:0000974,1.40e-07,23;UBERON:0004807,1.40e-07,23;UBERON:0005058,1.40e-07,23;UBERON:0003351,1.40e-07,23;UBERON:0009113,1.40e-07,23;UBERON:0003295,1.40e-07,23;UBERON:0009722,1.40e-07,23;UBERON:0005562,1.40e-07,23;UBERON:0007690,1.40e-07,23;UBERON:0000153,1.41e-07,43;UBERON:0001049,2.77e-07,52;UBERON:0005068,2.77e-07,52;UBERON:0006241,2.77e-07,52;UBERON:0007135,2.77e-07,52;UBERON:0001016,2.90e-07,75;UBERON:0004121,3.01e-07,95;UBERON:0000924,3.01e-07,95;UBERON:0006601,3.01e-07,95;UBERON:0007811,3.08e-07,36;UBERON:0003408,3.53e-07,24;UBERON:0010371,7.60e-07,73;UBERON:0003056,8.87e-07,49|phase1_expression=22.4208385946712,17.7977457896074,25.9349566452036,12.0985684522732,21.0376206577466,21.9921846204576,16.3528848416868,64.4325383973466,84.6140220131517,87.0720037917816,56.5019295144166,63.3390942422971,54.4418321181234,60.1452368642702,29.646768801594,27.3341610976265,9.79386629379405,41.16781257925,45.1106486562881,46.2584720459853,29.1698485218169,18.2695350209629,16.7167865048919,12.6394014006791,15.1410125504332,24.1177424928308,14.2151458732495,17.8841123129288,12.9215925230334,19.6583501212746,17.9601713630797,45.7222084890934,50.4353125819348,47.5445043046316,17.6199488048278,15.4598220183398,18.3752420636132,66.1279976564314,44.5361146378566,43.4524707498253,115.88160314211,107.238141138476,60.6887941288942,13.8486499773135,15.9161782014638,16.5192076945513,23.4717403304412,24.8548678273709,19.3323840806335,21.3872888981712,16.7983705950435,12.9377307928474,41.9456515144341,65.282592781021,63.8578218370682,13.8920095459411,16.6189395164479,19.0798674142654,40.26097571106,33.8554226734101,30.4239073682966,23.3802727127701,24.9002542911119,23.8473425079571,27.6882581518753,19.1829631035447,26.664409836138,24.2057532352579,29.3441602832992,26.4611639130114,26.0802952075714,28.5650984403804,28.4920417827581,29.397791811589,37.6672701101669,23.8996884518605,40.7428759697738,33.0710205640636,28.7244217189175,43.3905886632338,40.9864643338795,40.1103295328705,26.2432019061298,27.5753678915523,30.8652460509156,37.1232017696821,29.1861945638161,41.1942775273914,24.1566556732857,21.840180870861,17.971598299504,10.3250865237766,22.4390540123558,17.810205324048,16.8941868536394,15.2329141613094,15.4488862144927,14.1457167739788,14.2882302531578,10.9535268098205,30.7038655113164,10.2661181931454,10.1922095882658,0,17.9687564039308,17.988550448732,16.1767822404731,15.186456002635,30.2957323867191,26.5711428926036,27.0637109755172,20.3991870469135,24.6758582063983,28.4865790644457,28.1037010054335,22.7456530306713,24.9666917411718,17.0627241165496,42.461306493594,27.1768307911647,22.9675179198809,22.3042616442202,22.3670113461747,32.2058876712702,36.4437269855412,16.860165643767,24.8017307727255,20.9965955847693,19.8229554233981,34.0024751448948,27.9075367719362,34.5549468310377,31.1145533144175,35.5444485689159,33.2460871295296,33.2594589288903,22.2009813193689,23.7617313865278,17.1851475734899,18.7293251738962,31.7493880828997,29.1975672630511,29.890313547688,28.3325057531144,37.4200745332303,31.0035203089336,33.2641122187037,27.1638539275966,36.6465587985832,38.3885342740673,33.7826158394782,27.6186622858744,23.3559689349502,25.4224081561182,20.1666493679785,31.4474141573219,16.8531164955176,15.6982223339976,20.1756084570871,25.6835957944022,21.1073453982987,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| ||
|EntrezGene=74204 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000167268_5end | |||
|description=CAGE_peak_1_at_Xpo6_5end | |||
|id=chr7:133343929..133343982,- | |||
|ontology_enrichment_celltype=CL:0000791!2.28e-07!9;CL:0000789!2.28e-07!9;CL:0002420!2.28e-07!9;CL:0002419!2.28e-07!9;CL:0000790!2.28e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.28e-07,9;CL:0000789,2.28e-07,9;CL:0002420,2.28e-07,9;CL:0002419,2.28e-07,9;CL:0000790,2.28e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!6.55e-15!94;UBERON:0007811!4.96e-14!86;UBERON:0004177!3.74e-08!29;UBERON:0001017!1.37e-07!73;UBERON:0005743!1.37e-07!73;UBERON:0002370!1.40e-07!23;UBERON:0000974!1.40e-07!23;UBERON:0004807!1.40e-07!23;UBERON:0005058!1.40e-07!23;UBERON:0003351!1.40e-07!23;UBERON:0009113!1.40e-07!23;UBERON:0003295!1.40e-07!23;UBERON:0009722!1.40e-07!23;UBERON:0005562!1.40e-07!23;UBERON:0007690!1.40e-07!23;UBERON:0002346!1.57e-07!71;UBERON:0003075!1.57e-07!71;UBERON:0007284!1.57e-07!71;UBERON:0000033!1.76e-07!63;UBERON:0001049!2.77e-07!52;UBERON:0005068!2.77e-07!52;UBERON:0006241!2.77e-07!52;UBERON:0007135!2.77e-07!52;UBERON:0000073!2.90e-07!75;UBERON:0001016!2.90e-07!75;UBERON:0003408!3.53e-07!24;UBERON:0004121!3.80e-07!102;UBERON:0000924!3.80e-07!102;UBERON:0006601!3.80e-07!102;UBERON:0000955!4.58e-07!50;UBERON:0006238!4.58e-07!50;UBERON:0003056!8.87e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.74e-08,29;UBERON:0005057,3.74e-08,29;UBERON:0000073,7.03e-08,54;UBERON:0002346,7.81e-08,64;UBERON:0003075,7.81e-08,64;UBERON:0007284,7.81e-08,64;UBERON:0001017,1.37e-07,73;UBERON:0002370,1.40e-07,23;UBERON:0000974,1.40e-07,23;UBERON:0004807,1.40e-07,23;UBERON:0005058,1.40e-07,23;UBERON:0003351,1.40e-07,23;UBERON:0009113,1.40e-07,23;UBERON:0003295,1.40e-07,23;UBERON:0009722,1.40e-07,23;UBERON:0005562,1.40e-07,23;UBERON:0007690,1.40e-07,23;UBERON:0000153,1.41e-07,43;UBERON:0001049,2.77e-07,52;UBERON:0005068,2.77e-07,52;UBERON:0006241,2.77e-07,52;UBERON:0007135,2.77e-07,52;UBERON:0001016,2.90e-07,75;UBERON:0004121,3.01e-07,95;UBERON:0000924,3.01e-07,95;UBERON:0006601,3.01e-07,95;UBERON:0007811,3.08e-07,36;UBERON:0003408,3.53e-07,24;UBERON:0010371,7.60e-07,73;UBERON:0003056,8.87e-07,49 | |||
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| |||
|short_description=p1@Xpo6 | |||
}} |
Revision as of 11:44, 14 September 2013
Short description: | p1@Xpo6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Xpo6_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000167268_5end |
EntrezGene: | Xpo6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.28e-07 | 9 |
alpha-beta T cell | 2.28e-07 | 9 |
immature T cell | 2.28e-07 | 9 |
mature T cell | 2.28e-07 | 9 |
immature alpha-beta T cell | 2.28e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.74e-08 | 29 |
immune organ | 3.74e-08 | 29 |
regional part of nervous system | 7.03e-08 | 54 |
neurectoderm | 7.81e-08 | 64 |
neural plate | 7.81e-08 | 64 |
presumptive neural plate | 7.81e-08 | 64 |
central nervous system | 1.37e-07 | 73 |
thymus | 1.40e-07 | 23 |
neck | 1.40e-07 | 23 |
respiratory system epithelium | 1.40e-07 | 23 |
hemolymphoid system gland | 1.40e-07 | 23 |
pharyngeal epithelium | 1.40e-07 | 23 |
thymic region | 1.40e-07 | 23 |
pharyngeal gland | 1.40e-07 | 23 |
entire pharyngeal arch endoderm | 1.40e-07 | 23 |
thymus primordium | 1.40e-07 | 23 |
early pharyngeal endoderm | 1.40e-07 | 23 |
anterior region of body | 1.41e-07 | 43 |
neural tube | 2.77e-07 | 52 |
neural rod | 2.77e-07 | 52 |
future spinal cord | 2.77e-07 | 52 |
neural keel | 2.77e-07 | 52 |
nervous system | 2.90e-07 | 75 |
ectoderm-derived structure | 3.01e-07 | 95 |
ectoderm | 3.01e-07 | 95 |
presumptive ectoderm | 3.01e-07 | 95 |
craniocervical region | 3.08e-07 | 36 |
gland of gut | 3.53e-07 | 24 |
ecto-epithelium | 7.60e-07 | 73 |
pre-chordal neural plate | 8.87e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.