FFCP PHASE1:Mm9::chr7:133847693..133847709,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12721|HGNC=|MCL_coexpression_id=36|UniProt=O89053|association_with_transcript=24bp_to_ENSMUST00000106364_5end|description=CAGE_peak_7_at_Coro1a_5end|id=chr7:133847693..133847709,-|ontology_enrichment_celltype=CL:0000988!2.19e-12!32;CL:0002032!2.19e-12!32;CL:0000037!2.19e-12!32;CL:0000566!2.19e-12!32;CL:0000837!2.19e-12!32;CL:0000838!1.19e-10!12;CL:0002031!5.09e-10!25;CL:0000542!1.46e-09!13;CL:0000051!1.46e-09!13;CL:0000084!1.53e-09!11;CL:0000827!1.53e-09!11;CL:0000738!8.01e-08!17;CL:0002087!8.01e-08!17;CL:0000791!1.73e-07!9;CL:0000789!1.73e-07!9;CL:0002420!1.73e-07!9;CL:0002419!1.73e-07!9;CL:0000790!1.73e-07!9;CL:0002320!2.71e-07!46;CL:0000134!2.71e-07!46|ontology_enrichment_celltype_v019_2=CL:0000838,2.77e-16,12;CL:0000542,6.13e-15,13;CL:0000051,6.13e-15,13;CL:0000988,1.04e-14,32;CL:0002032,1.04e-14,32;CL:0000037,1.04e-14,32;CL:0000837,1.04e-14,32;CL:0002031,5.60e-14,25;CL:0000084,1.37e-13,11;CL:0000827,1.37e-13,11;CL:0000738,3.87e-11,17;CL:0002087,3.87e-11,17;CL:0002320,1.87e-09,46;CL:0000134,1.87e-09,46;CL:0000791,8.85e-09,9;CL:0000789,8.85e-09,9;CL:0002420,8.85e-09,9;CL:0002419,8.85e-09,9;CL:0000790,8.85e-09,9;CL:0000219,1.11e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.63e-11,3;DOID:4045,2.63e-11,3|ontology_enrichment_uberon=UBERON:0002193!4.97e-21!48;UBERON:0002390!2.32e-18!45;UBERON:0003061!2.32e-18!45;UBERON:0002405!4.70e-17!70;UBERON:0004177!9.85e-16!29;UBERON:0003408!2.28e-12!24;UBERON:0002370!1.30e-11!23;UBERON:0000974!1.30e-11!23;UBERON:0004807!1.30e-11!23;UBERON:0005058!1.30e-11!23;UBERON:0003351!1.30e-11!23;UBERON:0009113!1.30e-11!23;UBERON:0003295!1.30e-11!23;UBERON:0009722!1.30e-11!23;UBERON:0005562!1.30e-11!23;UBERON:0007690!1.30e-11!23;UBERON:0005057!2.99e-11!51;UBERON:0006562!6.91e-11!24;UBERON:0001557!6.91e-11!24;UBERON:0001042!6.91e-11!24;UBERON:0008814!6.91e-11!24;UBERON:0009145!6.91e-11!24;UBERON:0003081!8.73e-10!88;UBERON:0000072!4.72e-09!27;UBERON:0002384!2.71e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.14e-11,48;UBERON:0002405,1.14e-11,48;UBERON:0002384,1.87e-09,46;UBERON:0002370,2.49e-09,23;UBERON:0000974,2.49e-09,23;UBERON:0004807,2.49e-09,23;UBERON:0005058,2.49e-09,23;UBERON:0003351,2.49e-09,23;UBERON:0009113,2.49e-09,23;UBERON:0003295,2.49e-09,23;UBERON:0009722,2.49e-09,23;UBERON:0005562,2.49e-09,23;UBERON:0007690,2.49e-09,23;UBERON:0002390,2.79e-09,45;UBERON:0003061,2.79e-09,45;UBERON:0006562,6.98e-09,24;UBERON:0003408,6.98e-09,24;UBERON:0001557,6.98e-09,24;UBERON:0001042,6.98e-09,24;UBERON:0008814,6.98e-09,24;UBERON:0009145,6.98e-09,24;UBERON:0000072,9.69e-08,27;UBERON:0004177,4.13e-07,29;UBERON:0005057,4.13e-07,29|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,0,0.468129052643987,0.513653904676515,0.319088635981346,1.71200729931206,2.53519167015092,0.333109761815663,0.809901069559304,0,3.62781490161973,3.83920414096069,3.39511721438424,0,2.6808556824239,1.56719873483361,0.639969691173627,1.14704640533585,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,5.02237956884289,4.6880120671428,6.80580867165938,11.1763982725893,7.5135003345429,6.79714494243615,0,0,0,0,0,0,0,0,0,3.85899993932794,1.45072428402269,1.68046899571232,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0.958520996047362,1.19980546198682,0.127070227073065,0,0,0.125654352112864,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0.568326998791185,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0.54390568381871,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.555583582109135,0.565105371014073,0.683471138605126,0.686334519619568,0.339956859987711,0.839708713941948,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0.410843828659309,1.03936658382236,1.25318686967237,1.78813219303138,0.480781798079875,1.03382669022204,0.908698049533329,0.838274873204998,0.302478555410522,1.07203668813728,1.15454209968395,1.5193997283604,0,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p7@Coro1a}} | ||
|EntrezGene=12721 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=O89053 | |||
|association_with_transcript=24bp_to_ENSMUST00000106364_5end | |||
|description=CAGE_peak_7_at_Coro1a_5end | |||
|id=chr7:133847693..133847709,- | |||
|ontology_enrichment_celltype=CL:0000988!2.19e-12!32;CL:0002032!2.19e-12!32;CL:0000037!2.19e-12!32;CL:0000566!2.19e-12!32;CL:0000837!2.19e-12!32;CL:0000838!1.19e-10!12;CL:0002031!5.09e-10!25;CL:0000542!1.46e-09!13;CL:0000051!1.46e-09!13;CL:0000084!1.53e-09!11;CL:0000827!1.53e-09!11;CL:0000738!8.01e-08!17;CL:0002087!8.01e-08!17;CL:0000791!1.73e-07!9;CL:0000789!1.73e-07!9;CL:0002420!1.73e-07!9;CL:0002419!1.73e-07!9;CL:0000790!1.73e-07!9;CL:0002320!2.71e-07!46;CL:0000134!2.71e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.77e-16,12;CL:0000542,6.13e-15,13;CL:0000051,6.13e-15,13;CL:0000988,1.04e-14,32;CL:0002032,1.04e-14,32;CL:0000037,1.04e-14,32;CL:0000837,1.04e-14,32;CL:0002031,5.60e-14,25;CL:0000084,1.37e-13,11;CL:0000827,1.37e-13,11;CL:0000738,3.87e-11,17;CL:0002087,3.87e-11,17;CL:0002320,1.87e-09,46;CL:0000134,1.87e-09,46;CL:0000791,8.85e-09,9;CL:0000789,8.85e-09,9;CL:0002420,8.85e-09,9;CL:0002419,8.85e-09,9;CL:0000790,8.85e-09,9;CL:0000219,1.11e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.63e-11,3;DOID:4045,2.63e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.97e-21!48;UBERON:0002390!2.32e-18!45;UBERON:0003061!2.32e-18!45;UBERON:0002405!4.70e-17!70;UBERON:0004177!9.85e-16!29;UBERON:0003408!2.28e-12!24;UBERON:0002370!1.30e-11!23;UBERON:0000974!1.30e-11!23;UBERON:0004807!1.30e-11!23;UBERON:0005058!1.30e-11!23;UBERON:0003351!1.30e-11!23;UBERON:0009113!1.30e-11!23;UBERON:0003295!1.30e-11!23;UBERON:0009722!1.30e-11!23;UBERON:0005562!1.30e-11!23;UBERON:0007690!1.30e-11!23;UBERON:0005057!2.99e-11!51;UBERON:0006562!6.91e-11!24;UBERON:0001557!6.91e-11!24;UBERON:0001042!6.91e-11!24;UBERON:0008814!6.91e-11!24;UBERON:0009145!6.91e-11!24;UBERON:0003081!8.73e-10!88;UBERON:0000072!4.72e-09!27;UBERON:0002384!2.71e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.14e-11,48;UBERON:0002405,1.14e-11,48;UBERON:0002384,1.87e-09,46;UBERON:0002370,2.49e-09,23;UBERON:0000974,2.49e-09,23;UBERON:0004807,2.49e-09,23;UBERON:0005058,2.49e-09,23;UBERON:0003351,2.49e-09,23;UBERON:0009113,2.49e-09,23;UBERON:0003295,2.49e-09,23;UBERON:0009722,2.49e-09,23;UBERON:0005562,2.49e-09,23;UBERON:0007690,2.49e-09,23;UBERON:0002390,2.79e-09,45;UBERON:0003061,2.79e-09,45;UBERON:0006562,6.98e-09,24;UBERON:0003408,6.98e-09,24;UBERON:0001557,6.98e-09,24;UBERON:0001042,6.98e-09,24;UBERON:0008814,6.98e-09,24;UBERON:0009145,6.98e-09,24;UBERON:0000072,9.69e-08,27;UBERON:0004177,4.13e-07,29;UBERON:0005057,4.13e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,0,0.468129052643987,0.513653904676515,0.319088635981346,1.71200729931206,2.53519167015092,0.333109761815663,0.809901069559304,0,3.62781490161973,3.83920414096069,3.39511721438424,0,2.6808556824239,1.56719873483361,0.639969691173627,1.14704640533585,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,5.02237956884289,4.6880120671428,6.80580867165938,11.1763982725893,7.5135003345429,6.79714494243615,0,0,0,0,0,0,0,0,0,3.85899993932794,1.45072428402269,1.68046899571232,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0.958520996047362,1.19980546198682,0.127070227073065,0,0,0.125654352112864,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0.568326998791185,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0.54390568381871,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.555583582109135,0.565105371014073,0.683471138605126,0.686334519619568,0.339956859987711,0.839708713941948,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0.410843828659309,1.03936658382236,1.25318686967237,1.78813219303138,0.480781798079875,1.03382669022204,0.908698049533329,0.838274873204998,0.302478555410522,1.07203668813728,1.15454209968395,1.5193997283604,0,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p7@Coro1a | |||
}} |
Revision as of 11:49, 14 September 2013
Short description: | p7@Coro1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Coro1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 24bp_to_ENSMUST00000106364_5end |
EntrezGene: | Coro1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.77e-16 | 12 |
lymphocyte | 6.13e-15 | 13 |
common lymphoid progenitor | 6.13e-15 | 13 |
hematopoietic cell | 1.04e-14 | 32 |
hematopoietic oligopotent progenitor cell | 1.04e-14 | 32 |
hematopoietic stem cell | 1.04e-14 | 32 |
hematopoietic multipotent progenitor cell | 1.04e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 5.60e-14 | 25 |
T cell | 1.37e-13 | 11 |
pro-T cell | 1.37e-13 | 11 |
leukocyte | 3.87e-11 | 17 |
nongranular leukocyte | 3.87e-11 | 17 |
connective tissue cell | 1.87e-09 | 46 |
mesenchymal cell | 1.87e-09 | 46 |
mature alpha-beta T cell | 8.85e-09 | 9 |
alpha-beta T cell | 8.85e-09 | 9 |
immature T cell | 8.85e-09 | 9 |
mature T cell | 8.85e-09 | 9 |
immature alpha-beta T cell | 8.85e-09 | 9 |
motile cell | 1.11e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.14e-11 | 48 |
immune system | 1.14e-11 | 48 |
connective tissue | 1.87e-09 | 46 |
thymus | 2.49e-09 | 23 |
neck | 2.49e-09 | 23 |
respiratory system epithelium | 2.49e-09 | 23 |
hemolymphoid system gland | 2.49e-09 | 23 |
pharyngeal epithelium | 2.49e-09 | 23 |
thymic region | 2.49e-09 | 23 |
pharyngeal gland | 2.49e-09 | 23 |
entire pharyngeal arch endoderm | 2.49e-09 | 23 |
thymus primordium | 2.49e-09 | 23 |
early pharyngeal endoderm | 2.49e-09 | 23 |
hematopoietic system | 2.79e-09 | 45 |
blood island | 2.79e-09 | 45 |
pharynx | 6.98e-09 | 24 |
gland of gut | 6.98e-09 | 24 |
upper respiratory tract | 6.98e-09 | 24 |
chordate pharynx | 6.98e-09 | 24 |
pharyngeal arch system | 6.98e-09 | 24 |
pharyngeal region of foregut | 6.98e-09 | 24 |
segment of respiratory tract | 9.69e-08 | 27 |
hemopoietic organ | 4.13e-07 | 29 |
immune organ | 4.13e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.63e-11 | 3 |
muscle cancer | 2.63e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.