FFCP PHASE1:Mm9::chr7:19895040..19895049,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14282|HGNC=|MCL_coexpression_id=210|UniProt=P13346,A2RSD4|association_with_transcript=344bp_to_ENSMUST00000003640,NM_008036,uc009flk.1,uc012fbb.1_5end|description=CAGE_peak_5_at_Fosb_5end|id=chr7:19895040..19895049,-|ontology_enrichment_celltype=CL:0000144!5.99e-10!121;CL:0000012!5.99e-10!121;CL:0000063!6.36e-10!66;CL:0000624!3.31e-09!8;CL:0000838!1.90e-08!12;CL:0000791!3.75e-08!9;CL:0000789!3.75e-08!9;CL:0002420!3.75e-08!9;CL:0002419!3.75e-08!9;CL:0000790!3.75e-08!9;CL:0000988!7.79e-08!32;CL:0002032!7.79e-08!32;CL:0000037!7.79e-08!32;CL:0000566!7.79e-08!32;CL:0000837!7.79e-08!32;CL:0000542!9.46e-08!13;CL:0000051!9.46e-08!13;CL:0000548!2.32e-07!115;CL:0000004!2.32e-07!115;CL:0000255!2.32e-07!115;CL:0000197!2.73e-07!2;CL:0002491!2.73e-07!2;CL:0000098!2.73e-07!2;CL:0000075!3.93e-07!7;CL:0002371!4.60e-07!118|ontology_enrichment_celltype_v019_2=CL:0000213,1.20e-12,1;CL:0002078,1.20e-12,1;CL:0000115,1.20e-12,1;CL:0002262,1.20e-12,1;CL:1000398,1.20e-12,1;CL:0000710,7.11e-12,1;CL:0002077,7.11e-12,1;CL:0005014,7.11e-12,1;CL:0002315,7.11e-12,1;CL:0002490,7.11e-12,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003465!2.73e-07!2;UBERON:0008193!2.73e-07!2;UBERON:0000032!2.73e-07!2;UBERON:0005744!2.73e-07!2;UBERON:0008001!2.73e-07!2;UBERON:0007497!2.73e-07!2;UBERON:0009955!2.73e-07!2;UBERON:0003067!2.73e-07!2;UBERON:0002546!2.73e-07!2;UBERON:0007914!2.73e-07!2;UBERON:0003457!2.73e-07!2;UBERON:0004766!2.73e-07!2;UBERON:0005253!2.73e-07!2;UBERON:0002227!2.73e-07!2;UBERON:0001846!2.73e-07!2;UBERON:0003128!2.73e-07!2;UBERON:0002241!2.73e-07!2;UBERON:0002105!2.73e-07!2;UBERON:0001678!2.73e-07!2;UBERON:0003129!2.73e-07!2;UBERON:0001694!2.73e-07!2;UBERON:0004681!2.73e-07!2;UBERON:0001839!2.73e-07!2;UBERON:0001690!2.73e-07!2;UBERON:0001844!2.73e-07!2;UBERON:0001849!2.73e-07!2;UBERON:0002499!2.73e-07!2;UBERON:0005944!2.73e-07!2;UBERON:0001855!2.73e-07!2;UBERON:0001703!2.73e-07!2;UBERON:0003069!2.73e-07!2;UBERON:0003051!2.73e-07!2;UBERON:0004288!2.73e-07!2;UBERON:0004637!2.73e-07!2;UBERON:0004761!2.73e-07!2;UBERON:0010113!2.73e-07!2;UBERON:0003089!2.73e-07!2;UBERON:0009123!2.73e-07!2;UBERON:0009617!2.73e-07!2;UBERON:0005641!2.73e-07!2;UBERON:0000485!9.66e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.20e-12,1;UBERON:0001281,1.20e-12,1;UBERON:0000353,1.20e-12,1;UBERON:0003497,1.20e-12,1;UBERON:0003909,1.20e-12,1;UBERON:0003928,1.20e-12,1;UBERON:0003835,1.20e-12,1;UBERON:0003513,1.20e-12,1;UBERON:0001280,1.20e-12,1;UBERON:0004647,1.20e-12,1;UBERON:0002294,1.20e-12,1;UBERON:0001173,1.20e-12,1;UBERON:0004912,1.20e-12,1;UBERON:0005171,1.20e-12,1;UBERON:0000058,3.27e-07,7|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0.33575854382378,0.467225281191051,0.258246646883153,0.422366166455,0.70219357896598,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0,0.514518872071894,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,6.95674772884027,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75574786363617,0,1.77898317902291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20971958992012,2.6590775941495,2.21119958087078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p5@Fosb}} | ||
|EntrezGene=14282 | |||
|HGNC= | |||
|MCL_coexpression_id=210 | |||
|UniProt=P13346,A2RSD4 | |||
|association_with_transcript=344bp_to_ENSMUST00000003640,NM_008036,uc009flk.1,uc012fbb.1_5end | |||
|description=CAGE_peak_5_at_Fosb_5end | |||
|id=chr7:19895040..19895049,- | |||
|ontology_enrichment_celltype=CL:0000144!5.99e-10!121;CL:0000012!5.99e-10!121;CL:0000063!6.36e-10!66;CL:0000624!3.31e-09!8;CL:0000838!1.90e-08!12;CL:0000791!3.75e-08!9;CL:0000789!3.75e-08!9;CL:0002420!3.75e-08!9;CL:0002419!3.75e-08!9;CL:0000790!3.75e-08!9;CL:0000988!7.79e-08!32;CL:0002032!7.79e-08!32;CL:0000037!7.79e-08!32;CL:0000566!7.79e-08!32;CL:0000837!7.79e-08!32;CL:0000542!9.46e-08!13;CL:0000051!9.46e-08!13;CL:0000548!2.32e-07!115;CL:0000004!2.32e-07!115;CL:0000255!2.32e-07!115;CL:0000197!2.73e-07!2;CL:0002491!2.73e-07!2;CL:0000098!2.73e-07!2;CL:0000075!3.93e-07!7;CL:0002371!4.60e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.20e-12,1;CL:0002078,1.20e-12,1;CL:0000115,1.20e-12,1;CL:0002262,1.20e-12,1;CL:1000398,1.20e-12,1;CL:0000710,7.11e-12,1;CL:0002077,7.11e-12,1;CL:0005014,7.11e-12,1;CL:0002315,7.11e-12,1;CL:0002490,7.11e-12,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003465!2.73e-07!2;UBERON:0008193!2.73e-07!2;UBERON:0000032!2.73e-07!2;UBERON:0005744!2.73e-07!2;UBERON:0008001!2.73e-07!2;UBERON:0007497!2.73e-07!2;UBERON:0009955!2.73e-07!2;UBERON:0003067!2.73e-07!2;UBERON:0002546!2.73e-07!2;UBERON:0007914!2.73e-07!2;UBERON:0003457!2.73e-07!2;UBERON:0004766!2.73e-07!2;UBERON:0005253!2.73e-07!2;UBERON:0002227!2.73e-07!2;UBERON:0001846!2.73e-07!2;UBERON:0003128!2.73e-07!2;UBERON:0002241!2.73e-07!2;UBERON:0002105!2.73e-07!2;UBERON:0001678!2.73e-07!2;UBERON:0003129!2.73e-07!2;UBERON:0001694!2.73e-07!2;UBERON:0004681!2.73e-07!2;UBERON:0001839!2.73e-07!2;UBERON:0001690!2.73e-07!2;UBERON:0001844!2.73e-07!2;UBERON:0001849!2.73e-07!2;UBERON:0002499!2.73e-07!2;UBERON:0005944!2.73e-07!2;UBERON:0001855!2.73e-07!2;UBERON:0001703!2.73e-07!2;UBERON:0003069!2.73e-07!2;UBERON:0003051!2.73e-07!2;UBERON:0004288!2.73e-07!2;UBERON:0004637!2.73e-07!2;UBERON:0004761!2.73e-07!2;UBERON:0010113!2.73e-07!2;UBERON:0003089!2.73e-07!2;UBERON:0009123!2.73e-07!2;UBERON:0009617!2.73e-07!2;UBERON:0005641!2.73e-07!2;UBERON:0000485!9.66e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.20e-12,1;UBERON:0001281,1.20e-12,1;UBERON:0000353,1.20e-12,1;UBERON:0003497,1.20e-12,1;UBERON:0003909,1.20e-12,1;UBERON:0003928,1.20e-12,1;UBERON:0003835,1.20e-12,1;UBERON:0003513,1.20e-12,1;UBERON:0001280,1.20e-12,1;UBERON:0004647,1.20e-12,1;UBERON:0002294,1.20e-12,1;UBERON:0001173,1.20e-12,1;UBERON:0004912,1.20e-12,1;UBERON:0005171,1.20e-12,1;UBERON:0000058,3.27e-07,7 | |||
|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0.33575854382378,0.467225281191051,0.258246646883153,0.422366166455,0.70219357896598,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0,0.514518872071894,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,6.95674772884027,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75574786363617,0,1.77898317902291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20971958992012,2.6590775941495,2.21119958087078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p5@Fosb | |||
}} |
Revision as of 12:41, 14 September 2013
Short description: | p5@Fosb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Fosb_5end |
Coexpression cluster: | MCL_coexpression_mm9:210 |
Association with transcript: | 344bp_to_ENSMUST00000003640, NM_008036, uc009flk.1, uc012fbb.1_5end |
EntrezGene: | Fosb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.20e-12 | 1 |
meso-epithelial cell | 1.20e-12 | 1 |
endothelial cell | 1.20e-12 | 1 |
endothelial cell of sinusoid | 1.20e-12 | 1 |
endothelial cell of hepatic sinusoid | 1.20e-12 | 1 |
neurecto-epithelial cell | 7.11e-12 | 1 |
ecto-epithelial cell | 7.11e-12 | 1 |
auditory epithelial support cell | 7.11e-12 | 1 |
supporting cell of cochlea | 7.11e-12 | 1 |
organ of Corti supporting cell | 7.11e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.20e-12 | 1 |
hepatic sinusoid | 1.20e-12 | 1 |
parenchyma | 1.20e-12 | 1 |
abdomen blood vessel | 1.20e-12 | 1 |
sinusoid | 1.20e-12 | 1 |
digestive system duct | 1.20e-12 | 1 |
abdominal segment blood vessel | 1.20e-12 | 1 |
trunk blood vessel | 1.20e-12 | 1 |
liver parenchyma | 1.20e-12 | 1 |
liver lobule | 1.20e-12 | 1 |
biliary system | 1.20e-12 | 1 |
biliary tree | 1.20e-12 | 1 |
biliary bud | 1.20e-12 | 1 |
hepatic duct | 1.20e-12 | 1 |
duct | 3.27e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.