FFCP PHASE1:Mm9::chr8:96958159..96958197,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=122|UniProt=|association_with_transcript=0bp_to_ENSMUST00000057009_5end|description=CAGE_peak_1_at_ENSMUST00000057009_5end|id=chr8:96958159..96958197,-|ontology_enrichment_celltype=CL:0002320!2.07e-09!46;CL:0000134!2.07e-09!46;CL:0000988!6.87e-09!32;CL:0002032!6.87e-09!32;CL:0000037!6.87e-09!32;CL:0000566!6.87e-09!32;CL:0000837!6.87e-09!32;CL:0000219!1.49e-08!54;CL:0000838!1.61e-08!12;CL:0002031!2.42e-08!25;CL:0000084!3.15e-08!11;CL:0000827!3.15e-08!11;CL:0000738!4.37e-08!17;CL:0002087!4.37e-08!17;CL:0000791!1.21e-07!9;CL:0000789!1.21e-07!9;CL:0002420!1.21e-07!9;CL:0002419!1.21e-07!9;CL:0000790!1.21e-07!9;CL:0000542!2.04e-07!13;CL:0000051!2.04e-07!13;CL:0000624!2.22e-07!8|ontology_enrichment_celltype_v019_2=CL:0000624,1.13e-15,8;CL:0002031,4.64e-14,25;CL:0000791,9.84e-14,9;CL:0000789,9.84e-14,9;CL:0002420,9.84e-14,9;CL:0002419,9.84e-14,9;CL:0000790,9.84e-14,9;CL:0000988,2.28e-13,32;CL:0002032,2.28e-13,32;CL:0000037,2.28e-13,32;CL:0000837,2.28e-13,32;CL:0000084,2.71e-13,11;CL:0000827,2.71e-13,11;CL:0000893,4.93e-12,6;CL:0002489,4.93e-12,6;CL:0000898,4.93e-12,6;CL:0000809,4.93e-12,6;CL:0000810,4.93e-12,6;CL:0000895,4.93e-12,6;CL:0000808,4.93e-12,6;CL:0000894,4.93e-12,6;CL:0000806,4.93e-12,6;CL:0000807,4.93e-12,6;CL:0000805,4.93e-12,6;CL:0002425,4.93e-12,6;CL:0002436,4.93e-12,6;CL:0002427,4.93e-12,6;CL:0002428,4.93e-12,6;CL:0002429,4.93e-12,6;CL:0002433,4.93e-12,6;CL:0002431,4.93e-12,6;CL:0002432,4.93e-12,6;CL:0000838,5.18e-12,12;CL:0000738,9.90e-12,17;CL:0002087,9.90e-12,17;CL:0000542,6.25e-11,13;CL:0000051,6.25e-11,13;CL:0002320,3.20e-10,46;CL:0000134,3.20e-10,46;CL:0000219,5.39e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!5.94e-17!70;UBERON:0002193!3.02e-16!48;UBERON:0002390!6.21e-15!45;UBERON:0003061!6.21e-15!45;UBERON:0005057!7.08e-11!51;UBERON:0004177!2.00e-10!29;UBERON:0002384!2.07e-09!46;UBERON:0003408!1.43e-08!24;UBERON:0006562!4.39e-08!24;UBERON:0001557!4.39e-08!24;UBERON:0001042!4.39e-08!24;UBERON:0008814!4.39e-08!24;UBERON:0009145!4.39e-08!24;UBERON:0002370!4.43e-08!23;UBERON:0000974!4.43e-08!23;UBERON:0004807!4.43e-08!23;UBERON:0005058!4.43e-08!23;UBERON:0003351!4.43e-08!23;UBERON:0009113!4.43e-08!23;UBERON:0003295!4.43e-08!23;UBERON:0009722!4.43e-08!23;UBERON:0005562!4.43e-08!23;UBERON:0007690!4.43e-08!23;UBERON:0003081!9.13e-08!88;UBERON:0005911!9.27e-08!69;UBERON:0000077!1.18e-07!97;UBERON:0001004!4.44e-07!42;UBERON:0003929!6.13e-07!55;UBERON:0004119!9.23e-07!130;UBERON:0000925!9.23e-07!130;UBERON:0006595!9.23e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.00e-15,48;UBERON:0002405,2.00e-15,48;UBERON:0002390,5.02e-15,45;UBERON:0003061,5.02e-15,45;UBERON:0002384,3.20e-10,46;UBERON:0000077,4.12e-10,35;UBERON:0004177,8.49e-10,29;UBERON:0005057,8.49e-10,29;UBERON:0003408,1.11e-08,24;UBERON:0003081,5.04e-08,87;UBERON:0002370,9.16e-08,23;UBERON:0000974,9.16e-08,23;UBERON:0004807,9.16e-08,23;UBERON:0005058,9.16e-08,23;UBERON:0003351,9.16e-08,23;UBERON:0009113,9.16e-08,23;UBERON:0003295,9.16e-08,23;UBERON:0009722,9.16e-08,23;UBERON:0005562,9.16e-08,23;UBERON:0007690,9.16e-08,23;UBERON:0006562,2.45e-07,24;UBERON:0001557,2.45e-07,24;UBERON:0001042,2.45e-07,24;UBERON:0008814,2.45e-07,24;UBERON:0009145,2.45e-07,24;UBERON:0001004,2.93e-07,42;UBERON:0001041,3.77e-07,80|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0,4.77756296733832,3.94208422024667,1.63845168425395,3.25314139628459,2.95156988282745,8.04643430676667,8.47977903464275,0.333109761815663,1.01237633694913,0,5.8360500591274,5.21034847701807,2.54633791078818,0.595303031057488,0.496454756004426,1.04479915655574,0.319984845586813,0.68822784320151,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.671130424230945,3.62681071005672,0.672187598284928,0,0,0,0,0,0,0,0.889294796111139,1.7997994345628,0.988866362566974,0,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0.142371680799103,0,0.530083353332288,0.453429360640713,1.15945795480671,0.860423876981386,0,0.539703191637817,0.649776417447669,0.448026887097336,0.561777680527007,0,0.519572009205738,0,0,1.28326477414318,0,0,0,0,0,0.68510327831436,10.3575153458869,1.63286352971307,0,0,0,0,0.23517741427141,0.251333182659351,0.247194967734374,1.3013942122792,3.5384422077995,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,0,1.53274233125155,0,1.79970819298022,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.497627882440372,0.505445516867349,0.210441855886474,0,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0,0,2.1066395619397,0.51469581422943,0.852490498186778,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,1.53685080703735,0,0,0,0.660837565967596,1.05780226665418,0,0,0,0,0,0.3804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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=122 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000057009_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000057009_5end | |||
|id=chr8:96958159..96958197,- | |||
|ontology_enrichment_celltype=CL:0002320!2.07e-09!46;CL:0000134!2.07e-09!46;CL:0000988!6.87e-09!32;CL:0002032!6.87e-09!32;CL:0000037!6.87e-09!32;CL:0000566!6.87e-09!32;CL:0000837!6.87e-09!32;CL:0000219!1.49e-08!54;CL:0000838!1.61e-08!12;CL:0002031!2.42e-08!25;CL:0000084!3.15e-08!11;CL:0000827!3.15e-08!11;CL:0000738!4.37e-08!17;CL:0002087!4.37e-08!17;CL:0000791!1.21e-07!9;CL:0000789!1.21e-07!9;CL:0002420!1.21e-07!9;CL:0002419!1.21e-07!9;CL:0000790!1.21e-07!9;CL:0000542!2.04e-07!13;CL:0000051!2.04e-07!13;CL:0000624!2.22e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.13e-15,8;CL:0002031,4.64e-14,25;CL:0000791,9.84e-14,9;CL:0000789,9.84e-14,9;CL:0002420,9.84e-14,9;CL:0002419,9.84e-14,9;CL:0000790,9.84e-14,9;CL:0000988,2.28e-13,32;CL:0002032,2.28e-13,32;CL:0000037,2.28e-13,32;CL:0000837,2.28e-13,32;CL:0000084,2.71e-13,11;CL:0000827,2.71e-13,11;CL:0000893,4.93e-12,6;CL:0002489,4.93e-12,6;CL:0000898,4.93e-12,6;CL:0000809,4.93e-12,6;CL:0000810,4.93e-12,6;CL:0000895,4.93e-12,6;CL:0000808,4.93e-12,6;CL:0000894,4.93e-12,6;CL:0000806,4.93e-12,6;CL:0000807,4.93e-12,6;CL:0000805,4.93e-12,6;CL:0002425,4.93e-12,6;CL:0002436,4.93e-12,6;CL:0002427,4.93e-12,6;CL:0002428,4.93e-12,6;CL:0002429,4.93e-12,6;CL:0002433,4.93e-12,6;CL:0002431,4.93e-12,6;CL:0002432,4.93e-12,6;CL:0000838,5.18e-12,12;CL:0000738,9.90e-12,17;CL:0002087,9.90e-12,17;CL:0000542,6.25e-11,13;CL:0000051,6.25e-11,13;CL:0002320,3.20e-10,46;CL:0000134,3.20e-10,46;CL:0000219,5.39e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.94e-17!70;UBERON:0002193!3.02e-16!48;UBERON:0002390!6.21e-15!45;UBERON:0003061!6.21e-15!45;UBERON:0005057!7.08e-11!51;UBERON:0004177!2.00e-10!29;UBERON:0002384!2.07e-09!46;UBERON:0003408!1.43e-08!24;UBERON:0006562!4.39e-08!24;UBERON:0001557!4.39e-08!24;UBERON:0001042!4.39e-08!24;UBERON:0008814!4.39e-08!24;UBERON:0009145!4.39e-08!24;UBERON:0002370!4.43e-08!23;UBERON:0000974!4.43e-08!23;UBERON:0004807!4.43e-08!23;UBERON:0005058!4.43e-08!23;UBERON:0003351!4.43e-08!23;UBERON:0009113!4.43e-08!23;UBERON:0003295!4.43e-08!23;UBERON:0009722!4.43e-08!23;UBERON:0005562!4.43e-08!23;UBERON:0007690!4.43e-08!23;UBERON:0003081!9.13e-08!88;UBERON:0005911!9.27e-08!69;UBERON:0000077!1.18e-07!97;UBERON:0001004!4.44e-07!42;UBERON:0003929!6.13e-07!55;UBERON:0004119!9.23e-07!130;UBERON:0000925!9.23e-07!130;UBERON:0006595!9.23e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.00e-15,48;UBERON:0002405,2.00e-15,48;UBERON:0002390,5.02e-15,45;UBERON:0003061,5.02e-15,45;UBERON:0002384,3.20e-10,46;UBERON:0000077,4.12e-10,35;UBERON:0004177,8.49e-10,29;UBERON:0005057,8.49e-10,29;UBERON:0003408,1.11e-08,24;UBERON:0003081,5.04e-08,87;UBERON:0002370,9.16e-08,23;UBERON:0000974,9.16e-08,23;UBERON:0004807,9.16e-08,23;UBERON:0005058,9.16e-08,23;UBERON:0003351,9.16e-08,23;UBERON:0009113,9.16e-08,23;UBERON:0003295,9.16e-08,23;UBERON:0009722,9.16e-08,23;UBERON:0005562,9.16e-08,23;UBERON:0007690,9.16e-08,23;UBERON:0006562,2.45e-07,24;UBERON:0001557,2.45e-07,24;UBERON:0001042,2.45e-07,24;UBERON:0008814,2.45e-07,24;UBERON:0009145,2.45e-07,24;UBERON:0001004,2.93e-07,42;UBERON:0001041,3.77e-07,80 | |||
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|short_description=p1@ENSMUST00000057009 | |||
}} |
Revision as of 16:31, 14 September 2013
Short description: | p1@ENSMUST00000057009 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000057009_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | 0bp_to_ENSMUST00000057009_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.00e-15 | 48 |
immune system | 2.00e-15 | 48 |
hematopoietic system | 5.02e-15 | 45 |
blood island | 5.02e-15 | 45 |
connective tissue | 3.20e-10 | 46 |
mixed endoderm/mesoderm-derived structure | 4.12e-10 | 35 |
hemopoietic organ | 8.49e-10 | 29 |
immune organ | 8.49e-10 | 29 |
gland of gut | 1.11e-08 | 24 |
lateral plate mesoderm | 5.04e-08 | 87 |
thymus | 9.16e-08 | 23 |
neck | 9.16e-08 | 23 |
respiratory system epithelium | 9.16e-08 | 23 |
hemolymphoid system gland | 9.16e-08 | 23 |
pharyngeal epithelium | 9.16e-08 | 23 |
thymic region | 9.16e-08 | 23 |
pharyngeal gland | 9.16e-08 | 23 |
entire pharyngeal arch endoderm | 9.16e-08 | 23 |
thymus primordium | 9.16e-08 | 23 |
early pharyngeal endoderm | 9.16e-08 | 23 |
pharynx | 2.45e-07 | 24 |
upper respiratory tract | 2.45e-07 | 24 |
chordate pharynx | 2.45e-07 | 24 |
pharyngeal arch system | 2.45e-07 | 24 |
pharyngeal region of foregut | 2.45e-07 | 24 |
respiratory system | 2.93e-07 | 42 |
foregut | 3.77e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.