FFCP PHASE1:Mm9::chr9:120480615..120480639,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=67115|HGNC=|MCL_coexpression_id=776|UniProt=Q9CWK0,Q9CR57|association_with_transcript=0bp_to_ENSMUST00000050737,ENSMUST00000165532,NM_025974,uc009scr.1_5end|description=CAGE_peak_1_at_Rpl14_5end|id=chr9:120480615..120480639,+|ontology_enrichment_celltype=CL:0000988!1.15e-14!32;CL:0002032!1.15e-14!32;CL:0000037!1.15e-14!32;CL:0000566!1.15e-14!32;CL:0000837!1.15e-14!32;CL:0002031!1.88e-11!25;CL:0000034!4.97e-11!97;CL:0000219!1.53e-10!54;CL:0002320!6.63e-10!46;CL:0000134!6.63e-10!46;CL:0000723!3.50e-09!91;CL:0000048!3.50e-09!91;CL:0000548!2.15e-08!115;CL:0000004!2.15e-08!115;CL:0000255!2.15e-08!115;CL:0000049!2.23e-08!19;CL:0000144!3.80e-08!121;CL:0000012!3.80e-08!121;CL:0000542!1.66e-07!13;CL:0000051!1.66e-07!13;CL:0000838!2.09e-07!12;CL:0002371!3.98e-07!118;CL:0000738!6.33e-07!17;CL:0002087!6.33e-07!17;CL:0000763!7.89e-07!16;CL:0000084!8.72e-07!11;CL:0000827!8.72e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,1.15e-14,32;CL:0002032,1.15e-14,32;CL:0000037,1.15e-14,32;CL:0000837,1.15e-14,32;CL:0002031,1.88e-11,25;CL:0000034,4.97e-11,97;CL:0000219,1.53e-10,54;CL:0002320,6.63e-10,46;CL:0000134,6.63e-10,46;CL:0000723,3.50e-09,91;CL:0000048,3.50e-09,91;CL:0000049,2.23e-08,19;CL:0000542,1.66e-07,13;CL:0000051,1.66e-07,13;CL:0000838,2.09e-07,12;CL:0000738,6.33e-07,17;CL:0002087,6.33e-07,17;CL:0000763,7.89e-07,16;CL:0000084,8.72e-07,11;CL:0000827,8.72e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!6.63e-10!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.63e-10,46|phase1_expression=77.1917443045107,22.6834014965585,20.4749657725291,24.1971369045464,28.5510566069418,49.6922644859194,99.2853722530984,99.94145234378,290.58792252104,271.28078600719,313.671317789125,168.31925548016,238.996218983963,139.697803065558,150.56561234068,142.137637707658,178.388278922677,203.946289904101,187.435430739045,184.609498532143,36.2284416043557,108.127845857764,323.626538743141,120.314301940642,97.9577630156816,43.6416292727415,46.091533589021,49.7738547504404,91.5912881779722,61.4953516614231,68.0712667711785,139.706748161119,190.670084151217,174.329849116983,119.584570577028,144.624141461888,118.009887919649,25.9489611056883,53.1308034276184,37.6937095661135,9.41170380849623,17.7591826089196,18.4493934151838,51.6176953699867,52.6146273029281,85.3492397551819,121.270658373946,129.288917733605,57.7774660591661,86.9101648862047,149.225525452636,173.940602881616,237.412387571697,304.652099644765,371.383648052423,105.476368774738,132.664982691644,94.8836649790494,91.8516732302574,81.4646108078931,190.78325245536,107.074872133846,303.249525473899,112.937414518816,65.2651799294203,100.888176322346,58.1224214405705,89.1386468346006,91.0394796068434,74.2532660824299,90.860383303797,92.8365699312362,102.262134460597,94.8078785923744,102.458808518495,235.320009372165,39.6417171597799,78.1446509081349,87.4021174228025,97.5958529203434,111.065999333325,83.8670526596383,111.394016601551,93.9813558752905,102.680422506016,60.9881171930492,95.8161411777963,80.7109600423552,101.5488252598,93.1797336116665,69.277612799701,58.5088236347343,81.5965600449301,50.7321000139548,50.6825605609182,41.6665005000522,47.1893251642686,58.1167399991177,113.006912002248,162.889543849267,86.0553294835518,94.9615932865952,50.9610479413291,49.7746692207332,203.718069591552,182.925822873021,180.977751315292,29.4594409675175,82.6011848834478,68.7287103870139,93.161620473415,87.9905232322088,76.3337295917554,88.1727447232842,81.253796630772,55.6702999590462,79.349584642734,42.0784128636943,75.1918969157393,85.8981973220743,64.0440403535141,74.6707889828242,89.4680453846986,49.1871738979399,29.1130922470703,84.8117423292523,145.215930901175,285.553699952862,156.804660208162,71.8995069143149,60.3900795720587,87.8323921268922,61.8814579884504,33.4987249102733,67.7389025264166,58.4068547043927,106.625813951281,71.4096011301934,131.415834385511,79.1261378133142,99.5421388664683,117.250073261071,116.500197984061,95.6975593256791,56.6063672939048,54.3202174007763,60.2502088919056,64.1584359432759,109.077404424018,101.360858969951,105.394723374205,150.149076712889,87.0287890076121,109.002928121438,88.2805365190077,95.9345166065137,237.348057311873,290.288439225399,111.960418761863,96.1063584564729,80.2079125135349,97.7736993733311,87.5955521665278,89.5277254450687,91.0175966035532,76.968735712385,69.4828109625014,76.8315952775975,83.4318439061346,61.3986315655816,49.3709050134261,59.7957948569609,55.7657292839269,43.4828796783605,59.0914755465198,73.5767978511884,21.4772208939469,67.1704439325403,113.042772783674,96.6104554939424,103.609438902963,109.312470345852,111.41139996628,85.7917573767642,56.4689583237969,91.7373177812741,65.5984894968703,74.8076334874727,59.6590106584508,48.536248067328,72.838522807772,55.3612739647141,200.289303406454,102.480915810927,116.088967743273,80.0349718432085,94.2609087634661,79.8846988550728,60.8967852506598,73.2146333978827,55.1065534723226,54.6649436173576,65.5160305862599,128.303886295676,128.549582804035,128.621128284136,111.370206642288,104.188533013044,103.887347526819,114.790758842873,88.2015633656193,91.4289505916311,23.0029130443767,63.6361020513141,74.57700387438,37.6342528141196,52.2046473348764,37.1481511449793,67.0654080304775,114.452812709373,132.327560870925,116.614873927554,118.049194889117,111.559167456249,121.878344133639,64.5892374409314,51.2314218345121,72.8618828944469,60.1144477838726,69.3141821247572,58.8855788162704,56.8470800225341,164.362499493807,132.169081167946,112.12225424834,111.478445507112,53.6238970559225,51.8075654737538,148.361125565891,61.3504353106626,142.925223395564,145.24321287835,115.897787980246,133.583558055477,135.684392516178,125.119826608664,127.920181729267,113.103017011678,118.981621161904,50.7687679946455,85.8737515510025,139.425367671461,119.396141206171,81.9901511173501,196.462804743145,97.3550350981476,129.696805937878,142.019625056191,128.161021510255,106.065126040655,57.3710810833451,94.1552359346739,110.514187299264,109.032681487857,134.935818975998,147.483826844907,99.0679252743523,90.3906692037177,110.213598582907,114.670313741902,95.0543652322586,94.8922109643015,82.932706383469,100.168968258703,92.9299963932293,55.9236667080485,106.735744658602,97.2828892354732,75.7268161203797,86.66967312176,90.4842367543774,95.0375809523905,72.8702091574627,56.1838665091844,104.572979048286,96.3826673388249,92.5972636848558,108.123494320693,104.707778434305,100.66239621087,167.768710403935,157.865238221086,151.743571237257,78.2829906772393,133.65195728803,132.767612033832,119.129890926447,103.498706527162,94.1142649746025,92.3820772736022,71.4125857466902,68.0565449158477,61.8263422601852,88.8515217714304,51.2960574202613,89.4108945342993,118.302820676825,97.4200453603679,136.134453945529,122.831103231796,118.765525509503,100.127171944998,78.2250709415803,69.8178109187158,46.9488910200321,53.4058793861621,137.042245536151,129.621227942012,125.243673350594,106.699910617819,107.287931581883,81.3723193250189,80.9338608916683,82.4895896076366,62.2609610371349,69.3684153741463,66.4662746645111,62.1528496996528,51.4258369598903,92.279266131391,133.857529884561,89.2652873264283,142.198270060374,141.221593237531,106.040598629918,89.1948410181581,126.691712035728,134.922895985513,62.6874545304944,49.7151255427751,52.7063872364245,55.1648715323237,72.6187470956881,61.1869056885657,82.3527450282803,70.7004289062026,68.4245037566149,53.8470724221893,126.72435140028,43.4937112007124,91.8546798957242,140.758789182542,112.143042005971,122.807463644609,87.787457481638,81.1778125521243,68.0348724334648,68.4809443879891,70.2137660695964,73.3756467991836,50.7536970486763,49.6835182661786,53.3575506597647,69.0625852360457,71.9641664117553,66.7465902804419,99.3127020935969,168.395564633751,87.7745286106663,80.9289676086579,79.6376874424052,85.4636929798092,72.4642229198046,54.3225782664563,82.5005157656204,135.743971101927,77.9515613475247,244.658030442774,109.381486710489,68.4606152510166,95.7600641017073,70.8061364219865,105.519916206684,108.417790825069,98.7191387639623,83.7997110788363,100.426374336143,88.2365676478062,59.3581659188279|short_description=p1@Rpl14}} | ||
|EntrezGene=67115 | |||
|HGNC= | |||
|MCL_coexpression_id=776 | |||
|UniProt=Q9CWK0,Q9CR57 | |||
|association_with_transcript=0bp_to_ENSMUST00000050737,ENSMUST00000165532,NM_025974,uc009scr.1_5end | |||
|description=CAGE_peak_1_at_Rpl14_5end | |||
|id=chr9:120480615..120480639,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.15e-14!32;CL:0002032!1.15e-14!32;CL:0000037!1.15e-14!32;CL:0000566!1.15e-14!32;CL:0000837!1.15e-14!32;CL:0002031!1.88e-11!25;CL:0000034!4.97e-11!97;CL:0000219!1.53e-10!54;CL:0002320!6.63e-10!46;CL:0000134!6.63e-10!46;CL:0000723!3.50e-09!91;CL:0000048!3.50e-09!91;CL:0000548!2.15e-08!115;CL:0000004!2.15e-08!115;CL:0000255!2.15e-08!115;CL:0000049!2.23e-08!19;CL:0000144!3.80e-08!121;CL:0000012!3.80e-08!121;CL:0000542!1.66e-07!13;CL:0000051!1.66e-07!13;CL:0000838!2.09e-07!12;CL:0002371!3.98e-07!118;CL:0000738!6.33e-07!17;CL:0002087!6.33e-07!17;CL:0000763!7.89e-07!16;CL:0000084!8.72e-07!11;CL:0000827!8.72e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.15e-14,32;CL:0002032,1.15e-14,32;CL:0000037,1.15e-14,32;CL:0000837,1.15e-14,32;CL:0002031,1.88e-11,25;CL:0000034,4.97e-11,97;CL:0000219,1.53e-10,54;CL:0002320,6.63e-10,46;CL:0000134,6.63e-10,46;CL:0000723,3.50e-09,91;CL:0000048,3.50e-09,91;CL:0000049,2.23e-08,19;CL:0000542,1.66e-07,13;CL:0000051,1.66e-07,13;CL:0000838,2.09e-07,12;CL:0000738,6.33e-07,17;CL:0002087,6.33e-07,17;CL:0000763,7.89e-07,16;CL:0000084,8.72e-07,11;CL:0000827,8.72e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.63e-10!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.63e-10,46 | |||
|phase1_expression=77.1917443045107,22.6834014965585,20.4749657725291,24.1971369045464,28.5510566069418,49.6922644859194,99.2853722530984,99.94145234378,290.58792252104,271.28078600719,313.671317789125,168.31925548016,238.996218983963,139.697803065558,150.56561234068,142.137637707658,178.388278922677,203.946289904101,187.435430739045,184.609498532143,36.2284416043557,108.127845857764,323.626538743141,120.314301940642,97.9577630156816,43.6416292727415,46.091533589021,49.7738547504404,91.5912881779722,61.4953516614231,68.0712667711785,139.706748161119,190.670084151217,174.329849116983,119.584570577028,144.624141461888,118.009887919649,25.9489611056883,53.1308034276184,37.6937095661135,9.41170380849623,17.7591826089196,18.4493934151838,51.6176953699867,52.6146273029281,85.3492397551819,121.270658373946,129.288917733605,57.7774660591661,86.9101648862047,149.225525452636,173.940602881616,237.412387571697,304.652099644765,371.383648052423,105.476368774738,132.664982691644,94.8836649790494,91.8516732302574,81.4646108078931,190.78325245536,107.074872133846,303.249525473899,112.937414518816,65.2651799294203,100.888176322346,58.1224214405705,89.1386468346006,91.0394796068434,74.2532660824299,90.860383303797,92.8365699312362,102.262134460597,94.8078785923744,102.458808518495,235.320009372165,39.6417171597799,78.1446509081349,87.4021174228025,97.5958529203434,111.065999333325,83.8670526596383,111.394016601551,93.9813558752905,102.680422506016,60.9881171930492,95.8161411777963,80.7109600423552,101.5488252598,93.1797336116665,69.277612799701,58.5088236347343,81.5965600449301,50.7321000139548,50.6825605609182,41.6665005000522,47.1893251642686,58.1167399991177,113.006912002248,162.889543849267,86.0553294835518,94.9615932865952,50.9610479413291,49.7746692207332,203.718069591552,182.925822873021,180.977751315292,29.4594409675175,82.6011848834478,68.7287103870139,93.161620473415,87.9905232322088,76.3337295917554,88.1727447232842,81.253796630772,55.6702999590462,79.349584642734,42.0784128636943,75.1918969157393,85.8981973220743,64.0440403535141,74.6707889828242,89.4680453846986,49.1871738979399,29.1130922470703,84.8117423292523,145.215930901175,285.553699952862,156.804660208162,71.8995069143149,60.3900795720587,87.8323921268922,61.8814579884504,33.4987249102733,67.7389025264166,58.4068547043927,106.625813951281,71.4096011301934,131.415834385511,79.1261378133142,99.5421388664683,117.250073261071,116.500197984061,95.6975593256791,56.6063672939048,54.3202174007763,60.2502088919056,64.1584359432759,109.077404424018,101.360858969951,105.394723374205,150.149076712889,87.0287890076121,109.002928121438,88.2805365190077,95.9345166065137,237.348057311873,290.288439225399,111.960418761863,96.1063584564729,80.2079125135349,97.7736993733311,87.5955521665278,89.5277254450687,91.0175966035532,76.968735712385,69.4828109625014,76.8315952775975,83.4318439061346,61.3986315655816,49.3709050134261,59.7957948569609,55.7657292839269,43.4828796783605,59.0914755465198,73.5767978511884,21.4772208939469,67.1704439325403,113.042772783674,96.6104554939424,103.609438902963,109.312470345852,111.41139996628,85.7917573767642,56.4689583237969,91.7373177812741,65.5984894968703,74.8076334874727,59.6590106584508,48.536248067328,72.838522807772,55.3612739647141,200.289303406454,102.480915810927,116.088967743273,80.0349718432085,94.2609087634661,79.8846988550728,60.8967852506598,73.2146333978827,55.1065534723226,54.6649436173576,65.5160305862599,128.303886295676,128.549582804035,128.621128284136,111.370206642288,104.188533013044,103.887347526819,114.790758842873,88.2015633656193,91.4289505916311,23.0029130443767,63.6361020513141,74.57700387438,37.6342528141196,52.2046473348764,37.1481511449793,67.0654080304775,114.452812709373,132.327560870925,116.614873927554,118.049194889117,111.559167456249,121.878344133639,64.5892374409314,51.2314218345121,72.8618828944469,60.1144477838726,69.3141821247572,58.8855788162704,56.8470800225341,164.362499493807,132.169081167946,112.12225424834,111.478445507112,53.6238970559225,51.8075654737538,148.361125565891,61.3504353106626,142.925223395564,145.24321287835,115.897787980246,133.583558055477,135.684392516178,125.119826608664,127.920181729267,113.103017011678,118.981621161904,50.7687679946455,85.8737515510025,139.425367671461,119.396141206171,81.9901511173501,196.462804743145,97.3550350981476,129.696805937878,142.019625056191,128.161021510255,106.065126040655,57.3710810833451,94.1552359346739,110.514187299264,109.032681487857,134.935818975998,147.483826844907,99.0679252743523,90.3906692037177,110.213598582907,114.670313741902,95.0543652322586,94.8922109643015,82.932706383469,100.168968258703,92.9299963932293,55.9236667080485,106.735744658602,97.2828892354732,75.7268161203797,86.66967312176,90.4842367543774,95.0375809523905,72.8702091574627,56.1838665091844,104.572979048286,96.3826673388249,92.5972636848558,108.123494320693,104.707778434305,100.66239621087,167.768710403935,157.865238221086,151.743571237257,78.2829906772393,133.65195728803,132.767612033832,119.129890926447,103.498706527162,94.1142649746025,92.3820772736022,71.4125857466902,68.0565449158477,61.8263422601852,88.8515217714304,51.2960574202613,89.4108945342993,118.302820676825,97.4200453603679,136.134453945529,122.831103231796,118.765525509503,100.127171944998,78.2250709415803,69.8178109187158,46.9488910200321,53.4058793861621,137.042245536151,129.621227942012,125.243673350594,106.699910617819,107.287931581883,81.3723193250189,80.9338608916683,82.4895896076366,62.2609610371349,69.3684153741463,66.4662746645111,62.1528496996528,51.4258369598903,92.279266131391,133.857529884561,89.2652873264283,142.198270060374,141.221593237531,106.040598629918,89.1948410181581,126.691712035728,134.922895985513,62.6874545304944,49.7151255427751,52.7063872364245,55.1648715323237,72.6187470956881,61.1869056885657,82.3527450282803,70.7004289062026,68.4245037566149,53.8470724221893,126.72435140028,43.4937112007124,91.8546798957242,140.758789182542,112.143042005971,122.807463644609,87.787457481638,81.1778125521243,68.0348724334648,68.4809443879891,70.2137660695964,73.3756467991836,50.7536970486763,49.6835182661786,53.3575506597647,69.0625852360457,71.9641664117553,66.7465902804419,99.3127020935969,168.395564633751,87.7745286106663,80.9289676086579,79.6376874424052,85.4636929798092,72.4642229198046,54.3225782664563,82.5005157656204,135.743971101927,77.9515613475247,244.658030442774,109.381486710489,68.4606152510166,95.7600641017073,70.8061364219865,105.519916206684,108.417790825069,98.7191387639623,83.7997110788363,100.426374336143,88.2365676478062,59.3581659188279 | |||
|short_description=p1@Rpl14 | |||
}} |
Revision as of 17:11, 14 September 2013
Short description: | p1@Rpl14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rpl14_5end |
Coexpression cluster: | MCL_coexpression_mm9:776 |
Association with transcript: | 0bp_to_ENSMUST00000050737, ENSMUST00000165532, NM_025974, uc009scr.1_5end |
EntrezGene: | Rpl14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.15e-14 | 32 |
hematopoietic oligopotent progenitor cell | 1.15e-14 | 32 |
hematopoietic stem cell | 1.15e-14 | 32 |
hematopoietic multipotent progenitor cell | 1.15e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 1.88e-11 | 25 |
stem cell | 4.97e-11 | 97 |
motile cell | 1.53e-10 | 54 |
connective tissue cell | 6.63e-10 | 46 |
mesenchymal cell | 6.63e-10 | 46 |
somatic stem cell | 3.50e-09 | 91 |
multi fate stem cell | 3.50e-09 | 91 |
common myeloid progenitor | 2.23e-08 | 19 |
lymphocyte | 1.66e-07 | 13 |
common lymphoid progenitor | 1.66e-07 | 13 |
lymphoid lineage restricted progenitor cell | 2.09e-07 | 12 |
leukocyte | 6.33e-07 | 17 |
nongranular leukocyte | 6.33e-07 | 17 |
myeloid cell | 7.89e-07 | 16 |
T cell | 8.72e-07 | 11 |
pro-T cell | 8.72e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.63e-10 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.