FFCP PHASE1:Mm9::chr9:44794613..44794631,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:44794613..44794631,-|id=chr9:44794613..44794631,-|ontology_enrichment_celltype=CL:0000838!2.18e-13!12;CL:0000791!3.64e-13!9;CL:0000789!3.64e-13!9;CL:0002420!3.64e-13!9;CL:0002419!3.64e-13!9;CL:0000790!3.64e-13!9;CL:0000084!1.92e-12!11;CL:0000827!1.92e-12!11;CL:0000542!4.21e-12!13;CL:0000051!4.21e-12!13;CL:0000624!7.15e-12!8;CL:0000988!1.17e-09!32;CL:0002032!1.17e-09!32;CL:0000037!1.17e-09!32;CL:0000566!1.17e-09!32;CL:0000837!1.17e-09!32;CL:0000893!2.79e-09!6;CL:0002489!2.79e-09!6;CL:0000898!2.79e-09!6;CL:0000809!2.79e-09!6;CL:0000810!2.79e-09!6;CL:0000895!2.79e-09!6;CL:0000808!2.79e-09!6;CL:0000894!2.79e-09!6;CL:0000806!2.79e-09!6;CL:0000807!2.79e-09!6;CL:0000805!2.79e-09!6;CL:0002425!2.79e-09!6;CL:0002436!2.79e-09!6;CL:0002427!2.79e-09!6;CL:0002428!2.79e-09!6;CL:0002429!2.79e-09!6;CL:0002433!2.79e-09!6;CL:0002431!2.79e-09!6;CL:0002432!2.79e-09!6;CL:0000738!1.68e-08!17;CL:0002087!1.68e-08!17;CL:0002031!5.04e-08!25;CL:0002320!7.29e-07!46;CL:0000134!7.29e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,5.41e-33,9;CL:0000789,5.41e-33,9;CL:0002420,5.41e-33,9;CL:0002419,5.41e-33,9;CL:0000790,5.41e-33,9;CL:0000624,1.80e-29,8;CL:0000084,9.44e-27,11;CL:0000827,9.44e-27,11;CL:0000838,2.08e-24,12;CL:0000893,1.95e-22,6;CL:0002489,1.95e-22,6;CL:0000898,1.95e-22,6;CL:0000809,1.95e-22,6;CL:0000810,1.95e-22,6;CL:0000895,1.95e-22,6;CL:0000808,1.95e-22,6;CL:0000894,1.95e-22,6;CL:0000806,1.95e-22,6;CL:0000807,1.95e-22,6;CL:0000805,1.95e-22,6;CL:0002425,1.95e-22,6;CL:0002436,1.95e-22,6;CL:0002427,1.95e-22,6;CL:0002428,1.95e-22,6;CL:0002429,1.95e-22,6;CL:0002433,1.95e-22,6;CL:0002431,1.95e-22,6;CL:0002432,1.95e-22,6;CL:0000542,2.00e-22,13;CL:0000051,2.00e-22,13;CL:0000738,8.00e-17,17;CL:0002087,8.00e-17,17;CL:0002031,5.48e-11,25;CL:0000988,3.90e-10,32;CL:0002032,3.90e-10,32;CL:0000037,3.90e-10,32;CL:0000837,3.90e-10,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.05e-12,3;DOID:4045,1.05e-12,3|ontology_enrichment_uberon=UBERON:0004177!6.93e-24!29;UBERON:0002370!9.68e-21!23;UBERON:0000974!9.68e-21!23;UBERON:0004807!9.68e-21!23;UBERON:0005058!9.68e-21!23;UBERON:0003351!9.68e-21!23;UBERON:0009113!9.68e-21!23;UBERON:0003295!9.68e-21!23;UBERON:0009722!9.68e-21!23;UBERON:0005562!9.68e-21!23;UBERON:0007690!9.68e-21!23;UBERON:0002390!1.19e-19!45;UBERON:0003061!1.19e-19!45;UBERON:0006562!1.35e-19!24;UBERON:0003408!1.35e-19!24;UBERON:0001557!1.35e-19!24;UBERON:0001042!1.35e-19!24;UBERON:0008814!1.35e-19!24;UBERON:0009145!1.35e-19!24;UBERON:0002193!1.67e-19!48;UBERON:0000072!1.11e-16!27;UBERON:0005057!1.27e-14!51;UBERON:0002405!2.76e-14!70;UBERON:0000063!1.28e-12!35;UBERON:0000065!7.83e-12!41;UBERON:0001004!2.19e-11!42;UBERON:0003081!8.76e-10!88;UBERON:0000490!2.25e-08!66;UBERON:0003929!3.38e-08!55;UBERON:0002368!1.22e-07!60;UBERON:0001041!3.20e-07!92;UBERON:0005911!5.29e-07!69;UBERON:0002384!7.29e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.14e-24,23;UBERON:0000974,2.14e-24,23;UBERON:0004807,2.14e-24,23;UBERON:0005058,2.14e-24,23;UBERON:0003351,2.14e-24,23;UBERON:0009113,2.14e-24,23;UBERON:0003295,2.14e-24,23;UBERON:0009722,2.14e-24,23;UBERON:0005562,2.14e-24,23;UBERON:0007690,2.14e-24,23;UBERON:0006562,2.77e-23,24;UBERON:0003408,2.77e-23,24;UBERON:0001557,2.77e-23,24;UBERON:0001042,2.77e-23,24;UBERON:0008814,2.77e-23,24;UBERON:0009145,2.77e-23,24;UBERON:0000072,1.92e-20,27;UBERON:0004177,7.13e-19,29;UBERON:0005057,7.13e-19,29;UBERON:0000077,3.06e-15,35;UBERON:0007811,9.40e-15,36;UBERON:0002193,2.86e-14,48;UBERON:0002405,2.86e-14,48;UBERON:0002390,3.18e-13,45;UBERON:0003061,3.18e-13,45;UBERON:0000065,1.14e-12,41;UBERON:0001004,2.59e-12,42;UBERON:0000153,5.67e-12,43;UBERON:0000490,1.81e-11,66;UBERON:0003929,7.47e-09,55;UBERON:0002368,6.37e-08,60;UBERON:0002530,3.90e-07,65|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,9.99599927276834,11.0010327371337,4.28044920563762,2.79202556483677,3.25281386869291,3.2345548895029,0.333109761815663,0,0,0.630924330716475,0,0.42438965179803,0.17008658030214,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5559489221072,10.9386948233332,5.23523743973798,26.4704169613956,10.2456822743767,13.1087795318411,0,0,0,0,0,0,0,0,0,0.503347818173209,4.35217285206807,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,3.36619248741323,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,0.565105371014073,0.410082683163076,0.228778173206523,0.849892149969277,0.839708713941948,0.414599921413271,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,3.16011120628178,0.608175645870493,1.1298205288131,1.29920822977795,0.537080087002444,0.596044064343795,0.480781798079875,1.18151621739662,0.908698049533329,0.838274873204998,1.71404514732629,0.877120926657772,1.53938946624527,1.75315353272353,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr9:44794613..44794631,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:44794613..44794631,- | |||
|id=chr9:44794613..44794631,- | |||
|ontology_enrichment_celltype=CL:0000838!2.18e-13!12;CL:0000791!3.64e-13!9;CL:0000789!3.64e-13!9;CL:0002420!3.64e-13!9;CL:0002419!3.64e-13!9;CL:0000790!3.64e-13!9;CL:0000084!1.92e-12!11;CL:0000827!1.92e-12!11;CL:0000542!4.21e-12!13;CL:0000051!4.21e-12!13;CL:0000624!7.15e-12!8;CL:0000988!1.17e-09!32;CL:0002032!1.17e-09!32;CL:0000037!1.17e-09!32;CL:0000566!1.17e-09!32;CL:0000837!1.17e-09!32;CL:0000893!2.79e-09!6;CL:0002489!2.79e-09!6;CL:0000898!2.79e-09!6;CL:0000809!2.79e-09!6;CL:0000810!2.79e-09!6;CL:0000895!2.79e-09!6;CL:0000808!2.79e-09!6;CL:0000894!2.79e-09!6;CL:0000806!2.79e-09!6;CL:0000807!2.79e-09!6;CL:0000805!2.79e-09!6;CL:0002425!2.79e-09!6;CL:0002436!2.79e-09!6;CL:0002427!2.79e-09!6;CL:0002428!2.79e-09!6;CL:0002429!2.79e-09!6;CL:0002433!2.79e-09!6;CL:0002431!2.79e-09!6;CL:0002432!2.79e-09!6;CL:0000738!1.68e-08!17;CL:0002087!1.68e-08!17;CL:0002031!5.04e-08!25;CL:0002320!7.29e-07!46;CL:0000134!7.29e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.41e-33,9;CL:0000789,5.41e-33,9;CL:0002420,5.41e-33,9;CL:0002419,5.41e-33,9;CL:0000790,5.41e-33,9;CL:0000624,1.80e-29,8;CL:0000084,9.44e-27,11;CL:0000827,9.44e-27,11;CL:0000838,2.08e-24,12;CL:0000893,1.95e-22,6;CL:0002489,1.95e-22,6;CL:0000898,1.95e-22,6;CL:0000809,1.95e-22,6;CL:0000810,1.95e-22,6;CL:0000895,1.95e-22,6;CL:0000808,1.95e-22,6;CL:0000894,1.95e-22,6;CL:0000806,1.95e-22,6;CL:0000807,1.95e-22,6;CL:0000805,1.95e-22,6;CL:0002425,1.95e-22,6;CL:0002436,1.95e-22,6;CL:0002427,1.95e-22,6;CL:0002428,1.95e-22,6;CL:0002429,1.95e-22,6;CL:0002433,1.95e-22,6;CL:0002431,1.95e-22,6;CL:0002432,1.95e-22,6;CL:0000542,2.00e-22,13;CL:0000051,2.00e-22,13;CL:0000738,8.00e-17,17;CL:0002087,8.00e-17,17;CL:0002031,5.48e-11,25;CL:0000988,3.90e-10,32;CL:0002032,3.90e-10,32;CL:0000037,3.90e-10,32;CL:0000837,3.90e-10,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.05e-12,3;DOID:4045,1.05e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.93e-24!29;UBERON:0002370!9.68e-21!23;UBERON:0000974!9.68e-21!23;UBERON:0004807!9.68e-21!23;UBERON:0005058!9.68e-21!23;UBERON:0003351!9.68e-21!23;UBERON:0009113!9.68e-21!23;UBERON:0003295!9.68e-21!23;UBERON:0009722!9.68e-21!23;UBERON:0005562!9.68e-21!23;UBERON:0007690!9.68e-21!23;UBERON:0002390!1.19e-19!45;UBERON:0003061!1.19e-19!45;UBERON:0006562!1.35e-19!24;UBERON:0003408!1.35e-19!24;UBERON:0001557!1.35e-19!24;UBERON:0001042!1.35e-19!24;UBERON:0008814!1.35e-19!24;UBERON:0009145!1.35e-19!24;UBERON:0002193!1.67e-19!48;UBERON:0000072!1.11e-16!27;UBERON:0005057!1.27e-14!51;UBERON:0002405!2.76e-14!70;UBERON:0000063!1.28e-12!35;UBERON:0000065!7.83e-12!41;UBERON:0001004!2.19e-11!42;UBERON:0003081!8.76e-10!88;UBERON:0000490!2.25e-08!66;UBERON:0003929!3.38e-08!55;UBERON:0002368!1.22e-07!60;UBERON:0001041!3.20e-07!92;UBERON:0005911!5.29e-07!69;UBERON:0002384!7.29e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.14e-24,23;UBERON:0000974,2.14e-24,23;UBERON:0004807,2.14e-24,23;UBERON:0005058,2.14e-24,23;UBERON:0003351,2.14e-24,23;UBERON:0009113,2.14e-24,23;UBERON:0003295,2.14e-24,23;UBERON:0009722,2.14e-24,23;UBERON:0005562,2.14e-24,23;UBERON:0007690,2.14e-24,23;UBERON:0006562,2.77e-23,24;UBERON:0003408,2.77e-23,24;UBERON:0001557,2.77e-23,24;UBERON:0001042,2.77e-23,24;UBERON:0008814,2.77e-23,24;UBERON:0009145,2.77e-23,24;UBERON:0000072,1.92e-20,27;UBERON:0004177,7.13e-19,29;UBERON:0005057,7.13e-19,29;UBERON:0000077,3.06e-15,35;UBERON:0007811,9.40e-15,36;UBERON:0002193,2.86e-14,48;UBERON:0002405,2.86e-14,48;UBERON:0002390,3.18e-13,45;UBERON:0003061,3.18e-13,45;UBERON:0000065,1.14e-12,41;UBERON:0001004,2.59e-12,42;UBERON:0000153,5.67e-12,43;UBERON:0000490,1.81e-11,66;UBERON:0003929,7.47e-09,55;UBERON:0002368,6.37e-08,60;UBERON:0002530,3.90e-07,65 | |||
|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,9.99599927276834,11.0010327371337,4.28044920563762,2.79202556483677,3.25281386869291,3.2345548895029,0.333109761815663,0,0,0.630924330716475,0,0.42438965179803,0.17008658030214,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5559489221072,10.9386948233332,5.23523743973798,26.4704169613956,10.2456822743767,13.1087795318411,0,0,0,0,0,0,0,0,0,0.503347818173209,4.35217285206807,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,3.36619248741323,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0.341741761595705,0,0.185194527369712,0.565105371014073,0.410082683163076,0.228778173206523,0.849892149969277,0.839708713941948,0.414599921413271,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,3.16011120628178,0.608175645870493,1.1298205288131,1.29920822977795,0.537080087002444,0.596044064343795,0.480781798079875,1.18151621739662,0.908698049533329,0.838274873204998,1.71404514732629,0.877120926657772,1.53938946624527,1.75315353272353,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr9:44794613..44794631,- | |||
}} |
Revision as of 17:58, 14 September 2013
Short description: | p@chr9:44794613..44794631, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:44794613..44794631, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.14e-24 | 23 |
neck | 2.14e-24 | 23 |
respiratory system epithelium | 2.14e-24 | 23 |
hemolymphoid system gland | 2.14e-24 | 23 |
pharyngeal epithelium | 2.14e-24 | 23 |
thymic region | 2.14e-24 | 23 |
pharyngeal gland | 2.14e-24 | 23 |
entire pharyngeal arch endoderm | 2.14e-24 | 23 |
thymus primordium | 2.14e-24 | 23 |
early pharyngeal endoderm | 2.14e-24 | 23 |
pharynx | 2.77e-23 | 24 |
gland of gut | 2.77e-23 | 24 |
upper respiratory tract | 2.77e-23 | 24 |
chordate pharynx | 2.77e-23 | 24 |
pharyngeal arch system | 2.77e-23 | 24 |
pharyngeal region of foregut | 2.77e-23 | 24 |
segment of respiratory tract | 1.92e-20 | 27 |
hemopoietic organ | 7.13e-19 | 29 |
immune organ | 7.13e-19 | 29 |
mixed endoderm/mesoderm-derived structure | 3.06e-15 | 35 |
craniocervical region | 9.40e-15 | 36 |
hemolymphoid system | 2.86e-14 | 48 |
immune system | 2.86e-14 | 48 |
hematopoietic system | 3.18e-13 | 45 |
blood island | 3.18e-13 | 45 |
respiratory tract | 1.14e-12 | 41 |
respiratory system | 2.59e-12 | 42 |
anterior region of body | 5.67e-12 | 43 |
unilaminar epithelium | 1.81e-11 | 66 |
gut epithelium | 7.47e-09 | 55 |
endocrine gland | 6.37e-08 | 60 |
gland | 3.90e-07 | 65 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.05e-12 | 3 |
muscle cancer | 1.05e-12 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.