FFCP PHASE1:Mm9::chr9:90140264..90140273,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:90140264..90140273,+|id=chr9:90140264..90140273,+|ontology_enrichment_celltype=CL:0000084!9.98e-14!11;CL:0000827!9.98e-14!11;CL:0000791!1.42e-12!9;CL:0000789!1.42e-12!9;CL:0002420!1.42e-12!9;CL:0002419!1.42e-12!9;CL:0000790!1.42e-12!9;CL:0000838!1.65e-12!12;CL:0000542!1.78e-11!13;CL:0000051!1.78e-11!13;CL:0000988!3.50e-10!32;CL:0002032!3.50e-10!32;CL:0000037!3.50e-10!32;CL:0000566!3.50e-10!32;CL:0000837!3.50e-10!32;CL:0000624!6.55e-10!8;CL:0000893!1.19e-08!6;CL:0002489!1.19e-08!6;CL:0000898!1.19e-08!6;CL:0000809!1.19e-08!6;CL:0000810!1.19e-08!6;CL:0000895!1.19e-08!6;CL:0000808!1.19e-08!6;CL:0000894!1.19e-08!6;CL:0000806!1.19e-08!6;CL:0000807!1.19e-08!6;CL:0000805!1.19e-08!6;CL:0002425!1.19e-08!6;CL:0002436!1.19e-08!6;CL:0002427!1.19e-08!6;CL:0002428!1.19e-08!6;CL:0002429!1.19e-08!6;CL:0002433!1.19e-08!6;CL:0002431!1.19e-08!6;CL:0002432!1.19e-08!6;CL:0000738!1.47e-08!17;CL:0002087!1.47e-08!17;CL:0002320!7.11e-08!46;CL:0000134!7.11e-08!46;CL:0000034!2.60e-07!97|ontology_enrichment_celltype_v019_2=CL:0000625,2.06e-13,1;CL:0000355,4.09e-13,9|ontology_enrichment_disease=DOID:0060100!2.63e-11!3;DOID:4045!2.63e-11!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.18e-37,3;DOID:4045,1.18e-37,3;DOID:0050686,2.81e-19,6|ontology_enrichment_uberon=UBERON:0002370!1.31e-11!23;UBERON:0000974!1.31e-11!23;UBERON:0004807!1.31e-11!23;UBERON:0005058!1.31e-11!23;UBERON:0003351!1.31e-11!23;UBERON:0009113!1.31e-11!23;UBERON:0003295!1.31e-11!23;UBERON:0009722!1.31e-11!23;UBERON:0005562!1.31e-11!23;UBERON:0007690!1.31e-11!23;UBERON:0006562!4.68e-11!24;UBERON:0003408!4.68e-11!24;UBERON:0001557!4.68e-11!24;UBERON:0001042!4.68e-11!24;UBERON:0008814!4.68e-11!24;UBERON:0009145!4.68e-11!24;UBERON:0004177!7.56e-11!29;UBERON:0000072!1.22e-09!27;UBERON:0002390!3.37e-09!45;UBERON:0003061!3.37e-09!45;UBERON:0002193!1.80e-08!48;UBERON:0000490!6.92e-08!66;UBERON:0002384!7.11e-08!46;UBERON:0000063!4.68e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.09e-13,9;UBERON:0002036,4.09e-13,9;UBERON:0002385,4.09e-13,9;UBERON:0000486,4.09e-13,9;UBERON:0007503,4.09e-13,9;UBERON:0001015,4.09e-13,9;UBERON:0002329,4.09e-13,9;UBERON:0003082,4.09e-13,9;UBERON:0003059,4.09e-13,9;UBERON:0007282,4.09e-13,9;UBERON:0004290,4.09e-13,9;UBERON:0009618,4.09e-13,9;UBERON:0000383,7.07e-12,10;UBERON:0007524,7.32e-11,11;UBERON:0003077,7.32e-11,11;UBERON:0007285,7.32e-11,11|phase1_expression=0,0,0,0,0,0,0,0,0.703943610758334,0,0.34243593645101,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,3.76678467663217,3.1253413780952,1.57057123192139,11.7646297606203,4.09827290975067,3.39857247121808,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:90140264..90140273,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:90140264..90140273,+ | |||
|id=chr9:90140264..90140273,+ | |||
|ontology_enrichment_celltype=CL:0000084!9.98e-14!11;CL:0000827!9.98e-14!11;CL:0000791!1.42e-12!9;CL:0000789!1.42e-12!9;CL:0002420!1.42e-12!9;CL:0002419!1.42e-12!9;CL:0000790!1.42e-12!9;CL:0000838!1.65e-12!12;CL:0000542!1.78e-11!13;CL:0000051!1.78e-11!13;CL:0000988!3.50e-10!32;CL:0002032!3.50e-10!32;CL:0000037!3.50e-10!32;CL:0000566!3.50e-10!32;CL:0000837!3.50e-10!32;CL:0000624!6.55e-10!8;CL:0000893!1.19e-08!6;CL:0002489!1.19e-08!6;CL:0000898!1.19e-08!6;CL:0000809!1.19e-08!6;CL:0000810!1.19e-08!6;CL:0000895!1.19e-08!6;CL:0000808!1.19e-08!6;CL:0000894!1.19e-08!6;CL:0000806!1.19e-08!6;CL:0000807!1.19e-08!6;CL:0000805!1.19e-08!6;CL:0002425!1.19e-08!6;CL:0002436!1.19e-08!6;CL:0002427!1.19e-08!6;CL:0002428!1.19e-08!6;CL:0002429!1.19e-08!6;CL:0002433!1.19e-08!6;CL:0002431!1.19e-08!6;CL:0002432!1.19e-08!6;CL:0000738!1.47e-08!17;CL:0002087!1.47e-08!17;CL:0002320!7.11e-08!46;CL:0000134!7.11e-08!46;CL:0000034!2.60e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.06e-13,1;CL:0000355,4.09e-13,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.63e-11!3;DOID:4045!2.63e-11!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.18e-37,3;DOID:4045,1.18e-37,3;DOID:0050686,2.81e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.31e-11!23;UBERON:0000974!1.31e-11!23;UBERON:0004807!1.31e-11!23;UBERON:0005058!1.31e-11!23;UBERON:0003351!1.31e-11!23;UBERON:0009113!1.31e-11!23;UBERON:0003295!1.31e-11!23;UBERON:0009722!1.31e-11!23;UBERON:0005562!1.31e-11!23;UBERON:0007690!1.31e-11!23;UBERON:0006562!4.68e-11!24;UBERON:0003408!4.68e-11!24;UBERON:0001557!4.68e-11!24;UBERON:0001042!4.68e-11!24;UBERON:0008814!4.68e-11!24;UBERON:0009145!4.68e-11!24;UBERON:0004177!7.56e-11!29;UBERON:0000072!1.22e-09!27;UBERON:0002390!3.37e-09!45;UBERON:0003061!3.37e-09!45;UBERON:0002193!1.80e-08!48;UBERON:0000490!6.92e-08!66;UBERON:0002384!7.11e-08!46;UBERON:0000063!4.68e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.09e-13,9;UBERON:0002036,4.09e-13,9;UBERON:0002385,4.09e-13,9;UBERON:0000486,4.09e-13,9;UBERON:0007503,4.09e-13,9;UBERON:0001015,4.09e-13,9;UBERON:0002329,4.09e-13,9;UBERON:0003082,4.09e-13,9;UBERON:0003059,4.09e-13,9;UBERON:0007282,4.09e-13,9;UBERON:0004290,4.09e-13,9;UBERON:0009618,4.09e-13,9;UBERON:0000383,7.07e-12,10;UBERON:0007524,7.32e-11,11;UBERON:0003077,7.32e-11,11;UBERON:0007285,7.32e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.703943610758334,0,0.34243593645101,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,3.76678467663217,3.1253413780952,1.57057123192139,11.7646297606203,4.09827290975067,3.39857247121808,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:90140264..90140273,+ | |||
}} |
Revision as of 18:57, 14 September 2013
Short description: | p@chr9:90140264..90140273, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:90140264..90140273, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.06e-13 | 1 |
multi-potent skeletal muscle stem cell | 4.09e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.09e-13 | 9 |
striated muscle tissue | 4.09e-13 | 9 |
muscle tissue | 4.09e-13 | 9 |
multilaminar epithelium | 4.09e-13 | 9 |
epithelial vesicle | 4.09e-13 | 9 |
musculature | 4.09e-13 | 9 |
somite | 4.09e-13 | 9 |
myotome | 4.09e-13 | 9 |
presomitic mesoderm | 4.09e-13 | 9 |
presumptive segmental plate | 4.09e-13 | 9 |
dermomyotome | 4.09e-13 | 9 |
trunk paraxial mesoderm | 4.09e-13 | 9 |
musculature of body | 7.07e-12 | 10 |
dense mesenchyme tissue | 7.32e-11 | 11 |
paraxial mesoderm | 7.32e-11 | 11 |
presumptive paraxial mesoderm | 7.32e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.18e-37 | 3 |
muscle cancer | 1.18e-37 | 3 |
organ system cancer | 2.81e-19 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.