Personal tools

FFCP PHASE1:Mm9::chrX:20508589..20508607,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=18636|HGNC=|MCL_coexpression_id=38|UniProt=A2AE15,P11680|association_with_transcript=42bp_to_NM_008823,uc009sub.1_5end|description=CAGE_peak_2_at_Cfp_5end|id=chrX:20508589..20508607,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,4.17e-08,19;CL:0000763,9.39e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.92e-15!70;UBERON:0000926!1.09e-12!193;UBERON:0004120!1.09e-12!193;UBERON:0006603!1.09e-12!193;UBERON:0002371!2.46e-10!16;UBERON:0002193!1.01e-09!48;UBERON:0001474!1.03e-09!22;UBERON:0004765!1.03e-09!22;UBERON:0001434!1.03e-09!22;UBERON:0002204!7.54e-09!32;UBERON:0000077!8.38e-09!97;UBERON:0001041!1.78e-08!92;UBERON:0003104!1.90e-08!131;UBERON:0009142!1.90e-08!131;UBERON:0002390!2.30e-08!45;UBERON:0003061!2.30e-08!45;UBERON:0002365!3.91e-07!25;UBERON:0002330!3.91e-07!25;UBERON:0000466!5.99e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.65e-12,16;UBERON:0002193,4.98e-12,48;UBERON:0002405,4.98e-12,48;UBERON:0001474,1.05e-11,22;UBERON:0004765,1.05e-11,22;UBERON:0001434,1.05e-11,22;UBERON:0002204,3.06e-11,32;UBERON:0002390,2.34e-10,45;UBERON:0003061,2.34e-10,45;UBERON:0001041,7.94e-09,80;UBERON:0002365,8.03e-08,25;UBERON:0002330,8.03e-08,25;UBERON:0002107,8.80e-07,22;UBERON:0007499,8.80e-07,22;UBERON:0006925,8.80e-07,22;UBERON:0009497,8.80e-07,22;UBERON:0000015,8.80e-07,22;UBERON:0002423,8.80e-07,22;UBERON:0006235,8.80e-07,22;UBERON:0008835,8.80e-07,22;UBERON:0003894,8.80e-07,22;UBERON:0004161,8.80e-07,22;UBERON:0008836,8.80e-07,22|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.174840804837995,12.9912807108108,11.5410902412201,24.4846657344851,11.5143690355757,10.0093536532189,17.3999757237192,0.935476191661768,7.14894848646374,3.6567970479451,10.0795226359846,11.0116454912242,0,0,0,0.190023419456374,0,1.33038306393183,0,0,0,0,0,0,66.1279976564314,50.786797394047,43.4524707498253,65.2936951714426,51.2284113718834,46.1234835379596,0,0,0,0,0,0,0,0.139986421625363,0,3.6912173332702,0,1.00828139742739,0.257259436035947,1.43266719969378,2.06268836910977,0,0,0,0,0,323.963898221304,292.704443319824,333.925654024667,16.7776061890307,23.4373166246148,0.103689612308478,0.135005938331691,0.210324961351382,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0,0.289864488701678,7.74381489283248,0,0,1.94932925234301,0.448026887097336,5.61777680527007,0,0,0,0,0,0,0,0,0,0,5.82337786567206,25.63485048107,0.890652834388949,0.346970653532272,0.304465478312141,0.922461989024234,0.904335843315735,1.99900802130698,2.13633205260448,0,5.92857363371638,5.30766331169925,3.558870698843,10.1587098491781,5.33362778448744,0,0,0,0.255457055208591,15.096705687746,1.79970819298022,20.2041661046173,0.149790639404823,0,0,0.173824320192276,0,0,0,0.509196819251581,7.96204611904595,0.505445516867349,0.841767423545896,0,0.229902104433473,0.360124259610698,0.452114453507145,0.748401490664606,0.640568601424249,0.655912071918102,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,1.64625709126355,0.199034266818493,3.51106593656617,4.88961023517959,18.1864639613179,0,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0.467061369468678,0.987359099480883,1.80584210487005,1.54030738137126,2.92399974850665,6.36695334344047,2.01309628140558,0.210289948564127,0.102904612379284,0.330418782983798,1.32225283331772,0,0.232236671860439,0.902072229254653,0.201683524623343,0.22237804384487,1.33157938278791,2.37264530772256,1.81168850196412,2.76468729680296,2.38747766449381,2.14460495831032,1.79763881730844,2.37751854862164,0.796565093017469,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.49095073923223,0.69560190836683,0.590440591918409,1.41298855057237,0,14.2297261001831,0.83422552858047,2.55526693647164,5.62155280962134,9.12870546248263,11.0941493486112,17.0599320693551,12.9463261852865,17.1863340381537,17.8464918572253,8.62609239164127,33.8648262378338,24.3389385029357,15.4073115547738,7.71408878144222,19.7801843758981,2.58654466233247,0.568474235311454,0.162964976442026,0.169745085775188,1.64283173801951,1.00503754465089,1.90434912708811,3.51240566144038,2.04925687338048,2.21464689648775,3.02964060449226,2.62181303545181,7.25276923836761,3.32692834737477,73.8877291302434,71.7955502640697,2.95058563811422,10.2096596132751,0.160550589987792,0,0,3.53459298086122,0,0,0,0,0,0,0,0,0,0,2.41298144854057,0.712262414669021,0.488660878060728,3.13443233647817,6.63725691699814,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,1.53717573971964,2.32585463851399,0.727067458955011,1.78248689192361,5.05658812697306,12.6502330289999,8.25084345985495,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0,0.658196082408484,0.913394847343798,0.938686832254841,0.63549621259146,1.7642271844397,2.80306630000516,2.09903754704677,2.17126529741361,1.67121281604391,1.64140899745061,1.45740418314925,0,30.7567585436135,5.98521917093345,10.7412825874433,20.3437933565066,15.9932246433599,40.0361803111415,1.18984900995699,2.6590775941495,2.07299960706636,1.90934123603023,0,0.203319467126849,1.18805874903981,1.25452977608681,1.09181281873089,1.21377911746339,4.05001933054146,2.87931536182433,1.94422459937689,2.4853572523477,0,0,0,0.583353565032143,0,0.168956125490778,0,1.17183946359555,0.209718688851422,0.241584120826006,1.44015003128933,4.4241556887945,0.608175645870493,0.513554785824136,1.29920822977795,0.537080087002444,1.58945083825012,4.20684073319891,3.39685912501528,3.43285929823702,4.41999478598999,3.42809029465258,4.0932309910696,6.25376970662141,6.31135271780472,1.13365191807606,0,0,0,6.18206700903009,7.3196165425961,1.64836461840539,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0.972426868273176,1.04806581313991,1.2869045591501,0.666740183404846,0.824140228955577,1.92551525755089,0.252697211763798,0.25347929989024,0.377252682772152,0.936415074698824,0.89635213366817,0.631790158511746,1.42888107384922,1.0429589335037,1.35036454324594,0,0.735994600671987,0.685738504770831,1.06485483695602,0.476872379894642,1.0174249164263,0.846984423737976,0.761531471025089,1.09756783723664,1.05227884575137,0.679020569229309,1.68342681497322,1.06771516311757,1.18205378850676,0.409231043169689,1.23949472948773,1.35034627686799,0.749431733813838,3.50897412668113,4.29742108096597,1.3390183244819,3.08827986767322,5.79669589051054|short_description=p2@Cfp}}
|EntrezGene=18636
|HGNC=
|MCL_coexpression_id=38
|UniProt=A2AE15,P11680
|association_with_transcript=42bp_to_NM_008823,uc009sub.1_5end
|description=CAGE_peak_2_at_Cfp_5end
|id=chrX:20508589..20508607,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000049,4.17e-08,19;CL:0000763,9.39e-07,16
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!1.92e-15!70;UBERON:0000926!1.09e-12!193;UBERON:0004120!1.09e-12!193;UBERON:0006603!1.09e-12!193;UBERON:0002371!2.46e-10!16;UBERON:0002193!1.01e-09!48;UBERON:0001474!1.03e-09!22;UBERON:0004765!1.03e-09!22;UBERON:0001434!1.03e-09!22;UBERON:0002204!7.54e-09!32;UBERON:0000077!8.38e-09!97;UBERON:0001041!1.78e-08!92;UBERON:0003104!1.90e-08!131;UBERON:0009142!1.90e-08!131;UBERON:0002390!2.30e-08!45;UBERON:0003061!2.30e-08!45;UBERON:0002365!3.91e-07!25;UBERON:0002330!3.91e-07!25;UBERON:0000466!5.99e-07!79
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.65e-12,16;UBERON:0002193,4.98e-12,48;UBERON:0002405,4.98e-12,48;UBERON:0001474,1.05e-11,22;UBERON:0004765,1.05e-11,22;UBERON:0001434,1.05e-11,22;UBERON:0002204,3.06e-11,32;UBERON:0002390,2.34e-10,45;UBERON:0003061,2.34e-10,45;UBERON:0001041,7.94e-09,80;UBERON:0002365,8.03e-08,25;UBERON:0002330,8.03e-08,25;UBERON:0002107,8.80e-07,22;UBERON:0007499,8.80e-07,22;UBERON:0006925,8.80e-07,22;UBERON:0009497,8.80e-07,22;UBERON:0000015,8.80e-07,22;UBERON:0002423,8.80e-07,22;UBERON:0006235,8.80e-07,22;UBERON:0008835,8.80e-07,22;UBERON:0003894,8.80e-07,22;UBERON:0004161,8.80e-07,22;UBERON:0008836,8.80e-07,22
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.174840804837995,12.9912807108108,11.5410902412201,24.4846657344851,11.5143690355757,10.0093536532189,17.3999757237192,0.935476191661768,7.14894848646374,3.6567970479451,10.0795226359846,11.0116454912242,0,0,0,0.190023419456374,0,1.33038306393183,0,0,0,0,0,0,66.1279976564314,50.786797394047,43.4524707498253,65.2936951714426,51.2284113718834,46.1234835379596,0,0,0,0,0,0,0,0.139986421625363,0,3.6912173332702,0,1.00828139742739,0.257259436035947,1.43266719969378,2.06268836910977,0,0,0,0,0,323.963898221304,292.704443319824,333.925654024667,16.7776061890307,23.4373166246148,0.103689612308478,0.135005938331691,0.210324961351382,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0,0.289864488701678,7.74381489283248,0,0,1.94932925234301,0.448026887097336,5.61777680527007,0,0,0,0,0,0,0,0,0,0,5.82337786567206,25.63485048107,0.890652834388949,0.346970653532272,0.304465478312141,0.922461989024234,0.904335843315735,1.99900802130698,2.13633205260448,0,5.92857363371638,5.30766331169925,3.558870698843,10.1587098491781,5.33362778448744,0,0,0,0.255457055208591,15.096705687746,1.79970819298022,20.2041661046173,0.149790639404823,0,0,0.173824320192276,0,0,0,0.509196819251581,7.96204611904595,0.505445516867349,0.841767423545896,0,0.229902104433473,0.360124259610698,0.452114453507145,0.748401490664606,0.640568601424249,0.655912071918102,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,1.64625709126355,0.199034266818493,3.51106593656617,4.88961023517959,18.1864639613179,0,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0.467061369468678,0.987359099480883,1.80584210487005,1.54030738137126,2.92399974850665,6.36695334344047,2.01309628140558,0.210289948564127,0.102904612379284,0.330418782983798,1.32225283331772,0,0.232236671860439,0.902072229254653,0.201683524623343,0.22237804384487,1.33157938278791,2.37264530772256,1.81168850196412,2.76468729680296,2.38747766449381,2.14460495831032,1.79763881730844,2.37751854862164,0.796565093017469,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.49095073923223,0.69560190836683,0.590440591918409,1.41298855057237,0,14.2297261001831,0.83422552858047,2.55526693647164,5.62155280962134,9.12870546248263,11.0941493486112,17.0599320693551,12.9463261852865,17.1863340381537,17.8464918572253,8.62609239164127,33.8648262378338,24.3389385029357,15.4073115547738,7.71408878144222,19.7801843758981,2.58654466233247,0.568474235311454,0.162964976442026,0.169745085775188,1.64283173801951,1.00503754465089,1.90434912708811,3.51240566144038,2.04925687338048,2.21464689648775,3.02964060449226,2.62181303545181,7.25276923836761,3.32692834737477,73.8877291302434,71.7955502640697,2.95058563811422,10.2096596132751,0.160550589987792,0,0,3.53459298086122,0,0,0,0,0,0,0,0,0,0,2.41298144854057,0.712262414669021,0.488660878060728,3.13443233647817,6.63725691699814,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,1.53717573971964,2.32585463851399,0.727067458955011,1.78248689192361,5.05658812697306,12.6502330289999,8.25084345985495,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0,0.658196082408484,0.913394847343798,0.938686832254841,0.63549621259146,1.7642271844397,2.80306630000516,2.09903754704677,2.17126529741361,1.67121281604391,1.64140899745061,1.45740418314925,0,30.7567585436135,5.98521917093345,10.7412825874433,20.3437933565066,15.9932246433599,40.0361803111415,1.18984900995699,2.6590775941495,2.07299960706636,1.90934123603023,0,0.203319467126849,1.18805874903981,1.25452977608681,1.09181281873089,1.21377911746339,4.05001933054146,2.87931536182433,1.94422459937689,2.4853572523477,0,0,0,0.583353565032143,0,0.168956125490778,0,1.17183946359555,0.209718688851422,0.241584120826006,1.44015003128933,4.4241556887945,0.608175645870493,0.513554785824136,1.29920822977795,0.537080087002444,1.58945083825012,4.20684073319891,3.39685912501528,3.43285929823702,4.41999478598999,3.42809029465258,4.0932309910696,6.25376970662141,6.31135271780472,1.13365191807606,0,0,0,6.18206700903009,7.3196165425961,1.64836461840539,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0.972426868273176,1.04806581313991,1.2869045591501,0.666740183404846,0.824140228955577,1.92551525755089,0.252697211763798,0.25347929989024,0.377252682772152,0.936415074698824,0.89635213366817,0.631790158511746,1.42888107384922,1.0429589335037,1.35036454324594,0,0.735994600671987,0.685738504770831,1.06485483695602,0.476872379894642,1.0174249164263,0.846984423737976,0.761531471025089,1.09756783723664,1.05227884575137,0.679020569229309,1.68342681497322,1.06771516311757,1.18205378850676,0.409231043169689,1.23949472948773,1.35034627686799,0.749431733813838,3.50897412668113,4.29742108096597,1.3390183244819,3.08827986767322,5.79669589051054
|short_description=p2@Cfp
}}

Revision as of 19:44, 14 September 2013

Short description:p2@Cfp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cfp_5end
Coexpression cluster:MCL_coexpression_mm9:38
Association with transcript: 42bp_to_NM_008823, uc009sub.1_5end
EntrezGene:Cfp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cfp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.54
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A524.48
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.01
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A617.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.01
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G866.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H150.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H343.45
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G965.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H251.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H446.12
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.69
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7323.96
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7292.70
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2333.93
Mouse Microglia, donor1.CNhs12629.11718-123C816.78
Mouse Microglia, donor2.CNhs12634.11736-123E823.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.82
accessory axillary lymph node, adult.CNhs10475.1063-29H925.63
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H15.93
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A610.16
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.10
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.20
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.96
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D518.19
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D36.37
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B214.23
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D79.13
liver, embryo E16.CNhs10523.462-17F511.09
liver, embryo E17.CNhs10510.481-18A317.06
liver, embryo E18.CNhs10579.499-43G412.95
liver, neonate N00.CNhs11117.641-24F417.19
liver, neonate N03.CNhs11123.1345-25G217.85
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H233.86
liver, neonate N10.CNhs11115.751-24B924.34
liver, neonate N20.CNhs11220.823-25A315.41
liver, neonate N25.CNhs11198.1368-26H17.71
liver, neonate N30.CNhs11106.1382-42D119.78
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C77.25
lung, neonate N30.CNhs11133.1394-42H23.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A173.89
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A171.80
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H210.21
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G230.76
spleen, embryo E16.CNhs11035.461-43C15.99
spleen, embryo E18.CNhs11011.1271-21F210.74
spleen, neonate N10.CNhs11116.752-24D120.34
spleen, neonate N20.CNhs11112.824-19H115.99
spleen, neonate N25.CNhs11099.1354-25G340.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A94.05
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F84.21
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C43.43
thymus, neonate N07.CNhs11211.713-19D34.42
thymus, neonate N10.CNhs11194.748-24E43.43
thymus, neonate N20.CNhs11186.820-7A24.09
thymus, neonate N25.CNhs11125.1362-25G76.25
thymus, neonate N30.CNhs11132.1393-42G26.31
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E46.18
uterus, adult pregnant day19.CNhs10497.590-15F57.32
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
common myeloid progenitor4.17e-0819
myeloid cell9.39e-0716

Uber anatomy
Ontology termp-valuen
bone marrow3.65e-1216
hemolymphoid system4.98e-1248
immune system4.98e-1248
bone element1.05e-1122
skeletal element1.05e-1122
skeletal system1.05e-1122
musculoskeletal system3.06e-1132
hematopoietic system2.34e-1045
blood island2.34e-1045
foregut7.94e-0980
exocrine gland8.03e-0825
exocrine system8.03e-0825
liver8.80e-0722
epithelial sac8.80e-0722
digestive gland8.80e-0722
epithelium of foregut-midgut junction8.80e-0722
anatomical boundary8.80e-0722
hepatobiliary system8.80e-0722
foregut-midgut junction8.80e-0722
hepatic diverticulum8.80e-0722
liver primordium8.80e-0722
septum transversum8.80e-0722
liver bud8.80e-0722







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:20508589..20508607,-&oldid=3065469"