Personal tools

MCL coexpression mm9:2346: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=0.197708786816505,-0.240345197050245,-0.244898680030874,-0.225710124108631,-0.124732223807188,-0.182729044855865,-0.206531830679381,-0.238540654736889,-0.153399533242829,-0.0918761391459857,-0.303198418232895,-0.284121029738081,-0.268333019909414,-0.259404170686672,-0.058217768201063,-0.0804077948614746,-0.119124135067869,-0.308736333249517,-0.279594435380192,-0.184757888328015,-0.0332523317625182,-0.375216201237774,-0.340699896676282,-0.235546584920519,-0.245083380513381,-0.215300575830457,-0.272918706463528,-0.301667481253836,-0.350144087043031,-0.335830589335521,-0.284654970715247,0.157247411956645,0.152972753132847,-0.411528032786342,-0.165181720264333,-0.136518053335913,-0.0462824885772757,-0.186446691207871,-0.257663059565553,-0.244322889752308,-0.193189941366015,-0.234672262918563,-0.26339884723772,-0.0235701166748792,-0.0522815046783118,0.179774791006122,-0.0166529214476922,-0.13054269018306,-0.253279840775037,-0.166472476329017,0.0450346069907469,-0.107463141348333,-0.174354113303906,-0.123146830504769,-0.291649940206233,-0.120488080853964,-0.0801486896587602,-0.182804384097912,0.942062936900026,0.846393120407075,0.933536781971282,-0.179180987941136,0.0173344316129218,-0.26948643028352,-0.201294629273018,-0.217473345807083,-0.0188467609190511,-0.0935998980401005,0.0504717591731003,0.0878117301631997,-0.0115958228852101,0.512094358020771,0.347840151488977,0.633689040596611,0.592239731648855,0.658375680016294,0.174777731789681,0.153354369278997,0.232695407262434,0.627197912529789,0.522586598596443,0.61775960492707,0.355453298619776,0.0939263778826533,0.248792747194823,0.472586254709539,0.433248138622993,0.799750154051323,-0.181724554063448,-0.187101249647892,-0.044099884587461,-0.273018717169903,-0.20931043235453,-0.222661906052305,-0.182068535242248,-0.195893497116098,-0.212282961707489,-0.061710048411459,-0.0729781308340813,-0.0560047456070432,-0.0813158628650294,-0.214608745422076,0.0289385091879525,-0.0742961226700235,-0.153166529616924,-0.159967264226017,-0.100841804337098,-0.0924604472456588,-0.0768735991484185,0.83562344299776,0.278246733369951,0.311515351591864,0.358209179549395,0.370138075527172,0.421173206486102,0.704473772061699,-0.152792001969809,-0.196168214305431,-0.0475924637201998,-0.0398828172768249,-0.0275815617780735,-0.133004255017961,-0.206777804099273,0.0680730907178574,0.0385592442406875,-0.05112639484818,-0.252157750635074,-0.261026236817208,-0.253064358995883,0.197657803059213,0.315728967948535,0.67274397935845,-0.0723093700777374,-0.0601579941514062,0.0933540358192976,0.178071556109682,-0.00446026377739195,-0.129575259904162,-0.178735694755766,0.447717720654785,0.229402762571987,0.202977409464073,0.261095945310467,0.243407446783566,0.318159689469627,0.14278318160933,0.187278005663654,0.35521647336729,0.09427073863945,0.128949440858232,0.182057845289325,0.0579189770660174,0.0944299853000591,0.083298000541552,-0.0132163090194656,0.12406014406462,-0.316275161990238,-0.28137010778354,-0.243639358838797,0.233381126864638,0.151637792028371,0.127200377717271,0.201942412841135,0.101867102420196,0.122997033354334,0.0153913783470312,0.0758481395012828,0.0456299238465642,0.0581147043361912,-0.0457723547232677,-0.0690921170146279,-0.093144203865393,-0.144835774502098,-0.0976072511604766,-0.141111359057629,-0.0432950703705856,-0.261727377145202,-0.0550235515617099,0.214942751208937,0.20714502324193,0.200144265668995,0.117976254266813,0.0537473282712087,0.0711972427140571,-0.124460272058476,-0.0325111560785409,0.107109033913187,0.0980914079810446,-0.0102478730905884,-0.0920353740422221,-0.0765572431309748,-0.075800985899531,0.154584963522515,0.195048667293342,0.233837353709957,0.105983013701352,0.0979855841276326,0.134324409394139,-0.0229595105945785,-0.236851774695636,-0.135021695750592,-0.157641724643236,-0.104145904508673,0.0998378918378405,0.0809776410476188,0.0831811348034452,0.148801683194717,0.014239720549557,-0.0874532603869582,0.0647516012898947,-0.0138553442869374,-0.090015460887488,0.0812417219912223,-0.155576300417985,-0.105447976052391,-0.0707636901852993,-0.22710123510323,-0.186857691602597,0.0207897766684721,0.355927783772583,0.245578698453072,0.155192575795529,0.229727651425349,0.14559504296498,0.067497525475003,0.102707805540797,0.134793727816252,0.123043672913833,0.130699496237987,0.0917521873180562,0.0314217508962455,-0.0167011339431069,-0.178669105854234,-0.241051827910148,-0.175065796917068,-0.198427562892078,0.162029625047574,0.147218224806413,-0.0844887751029573,-0.150453761666757,0.0309759076743838,0.0421670354840713,0.109947612691097,-0.00590374808337812,0.0758051087151209,0.056013633610554,0.140366494441444,0.0561682723898084,-0.0162511421497165,0.849105639435543,0.0844906244507407,0.0247816493828975,0.0680132063212672,-0.0327551880133042,0.273634530300085,0.172349229767155,0.146772602462925,0.137903429591834,0.124233734199664,0.0585265572104432,0.0993579242067608,0.261355944654487,0.140227674703239,0.211737544718432,0.286025305280133,0.267792924923926,0.00182145557711345,0.158259623109404,0.0278238462765805,0.0771975135774748,0.081216289696293,0.0185002825948025,-0.00232425481298447,-0.0963604249395728,-0.195161187582058,-0.261949464972522,-0.291166425023274,-0.111807036841713,0.0733886852043428,-0.0406196537680884,-0.146116645789906,-0.132402854493243,0.0309190706603217,0.132323169285694,0.041669662308578,0.238177191187798,0.35499146729587,0.169237183875278,0.00566989708086513,-0.0243987813408494,-0.242362444080269,-0.270546879240056,-0.294633418753221,0.0170945875803553,0.271219030944821,0.163875318820652,0.150331911956691,0.132396922611205,0.139925848720189,0.0716702295607141,0.142986610037084,-0.0175099861151209,-0.182939934495677,-0.0640677600545345,0.119181880361082,0.0391564011675094,0.096521586892054,0.226293760887513,0.246633569326187,0.162577766578713,0.0708434430244755,-0.039466208498535,0.0666340273232513,0.0814405273087068,0.00126545979926885,-0.227944996153174,0.036549601495731,-0.0456973832918064,-0.155182573139323,-0.132255209256826,-0.185782697707119,-0.219513606742991,-0.254452016409797,-0.237083981195683,-0.246371838549534,-0.274195894524701,-0.290250297731479,-0.314539272205332,-0.222059149780474,-0.190983983580303,0.187066840813508,0.320691675621762,0.102907105992131,-0.028790448231238,-0.196669377726011,-0.107398943293284,-0.11875930992421,-0.0804536457556085,-0.140213331443442,-0.243906223718366,-0.10619118780552,-0.0915967641072697,-0.197712730641235,-0.180646269930268,-0.153974824368712,-0.145641873158841,-0.228348693009295,-0.130521856052824,0.369346253306475,0.464010062318732,0.349922796440837,0.240244121930943,0.231501443245987,0.154394228151713,0.183112900210814,0.135048478033423,0.0680419854865517,0.159100568256304,0.181734224843683,0.199966749235156,0.120628603926978,0.164096131402715,0.199454432153893,0.129921801802344,0.180746212791125,0.168153797437509,0.106498030065171,0.0524306201921277,0.0742530847209282,0.102088129890706,0.0643423105690741,0.0917844710677762,0.128362321766761,0.133283443937496,0.137435612256489,0.0411091448641727,0.13281522760486,0.139390505518351,0.181956952277343,0.171451583802259,0.0690555481420216,0.136789962894815,0.169788959289992,0.298453377755505,0.0731585628952185,0.0636961715467781,0.11217962694231,-0.0229032887764737,-0.0876571198946818|coexpression_dpi_cluster_scores_median=0.190861982475838,-0.233691394818359,-0.233691394818359,-0.233691394818359,-0.166482468854374,-0.199992419599863,-0.233691394818359,-0.207320705625049,-0.135973389655722,-0.0334429999515636,-0.233691394818359,-0.233691394818359,-0.233691394818359,-0.233691394818359,-0.059959567363852,-0.0905878509113892,-0.11852290425691,-0.233691394818359,-0.181067674994459,-0.156876989887926,-0.0173794156125463,-0.233691394818359,-0.183299450085454,-0.20146381863152,-0.188843151129924,-0.135157031660495,-0.233691394818359,-0.148946710235155,-0.233691394818359,-0.233691394818359,-0.233691394818359,0.122346199056928,0.198511160227993,-0.233691394818359,-0.0795772753459727,-0.0660986412540357,-0.0411867670993954,-0.157771882700488,-0.233691394818359,-0.233691394818359,-0.215554205902092,-0.233691394818359,-0.233691394818359,-0.0242495376352403,-0.062865717988422,0.185765615773232,-0.0453241445913699,-0.0922408488783115,-0.233691394818359,-0.195111061743007,0.0501633926117107,-0.170825676829937,-0.177882549777876,-0.115251262571563,-0.233691394818359,-0.119862936773116,-0.13531780116587,-0.143388767758085,0.963966391707769,0.894342042393492,0.957702321059303,-0.121335658002849,-0.0326758126558424,-0.233691394818359,-0.2317635817161,-0.233691394818359,-0.00610749444806015,-0.119995608903708,0.0578437072086905,0.100684143111638,-0.0648132421814472,0.511420464300621,0.349501472233988,0.744620034080032,0.611211498619218,0.713420340866702,0.176596702916313,0.131937526447135,0.259646177477967,0.575648196556287,0.561979296759186,0.639843092110681,0.349496570060151,0.102666578776315,0.228740549146948,0.457257893697131,0.480927983808587,0.79602730511467,-0.133344387994929,-0.189319613524811,-0.071534384528166,-0.233691394818359,-0.233691394818359,-0.170825676829937,-0.170825676829937,-0.170825676829937,-0.205154332483863,-0.086641601352477,-0.062865717988422,-0.0138900929829209,-0.0743100322844545,-0.233691394818359,0.0165734007952529,-0.062865717988422,-0.128271219396567,-0.149108851622098,-0.056836119601827,-0.0421756550926942,-0.0793290093960899,0.870155914252692,0.251657191851348,0.273517533340117,0.385905265195455,0.38448806135596,0.395023391661329,0.705688091439765,-0.084398036973529,-0.204364646033839,-0.0332148676262832,-0.0235263164250765,-0.0288174579950655,-0.147846410130023,-0.233691394818359,0.0712861909758305,0.054402536550927,-0.013464787183951,-0.233691394818359,-0.233691394818359,-0.233691394818359,0.221368098372152,0.26582208394617,0.702017699449137,-0.11655457382547,0.008985865422548,0.0880675002527509,0.205692277764626,-0.00763388172500185,-0.145989436293729,-0.184763911118912,0.485608808055983,0.218819243829792,0.198217933797482,0.209942515779818,0.207462455256082,0.31595888737021,0.122951764339825,0.176369199940861,0.353659699244529,0.105745883881618,0.079726232649788,0.158899508648072,0.049122057339544,0.0875586947607101,0.100061272231913,-0.0266500095163996,0.0914940319572777,-0.233691394818359,-0.233691394818359,-0.233691394818359,0.241781911175723,0.216358167284636,0.107731307619421,0.198342703516581,0.102207776011299,0.117586137062129,-0.00333057663514258,0.0820136208534547,0.049141212362899,0.0674078557637899,-0.0231568196586384,-0.0778686466219727,-0.0249520609885403,-0.161945697970706,-0.094852948937464,-0.0597009402919545,-0.0507079982739446,-0.233691394818359,-0.0439929424261636,0.196060491928023,0.235935551680075,0.182575499199499,0.126344226718883,0.0351127628827075,0.0809993259867902,-0.149364726569757,-0.0215963270780511,0.107836605317852,0.126483749757555,0.0160668125854264,-0.0944495637280103,-0.0559126833590795,-0.0235540301775174,0.170121424412349,0.180146178468811,0.26799121996151,0.124708209670269,0.0934402545643867,0.113093984731468,-0.0072169043669197,-0.147622384280953,-0.0762066176778255,-0.146575891648584,-0.120934742722264,0.0554735382387335,0.0594664609288667,0.0850238551403945,0.187570495624612,0.00573915300492085,-0.062865717988422,0.0387678683054427,0.0170707904498383,-0.085968085022399,0.130622813066772,-0.146160568426972,-0.0990434279283829,-0.0331567409634251,-0.162031223805257,-0.148202316591937,0.00541631196668155,0.360317550983814,0.270345791327191,0.157952697069505,0.292811695522998,0.142887936592323,0.077804556472895,0.115289967736787,0.179472619028208,0.132122573137363,0.14837604820529,0.0795437332294649,0.0277780275205662,-0.0189530484464344,-0.186512534878532,-0.233691394818359,-0.146841293911974,-0.138263237291861,0.173775629471277,0.158085114461623,-0.062865717988422,-0.13592374115832,0.0424882944302191,0.112007886996279,0.136125662374947,-0.0163355333426264,0.05964888298096,0.0206672947163023,0.17096752224102,0.0618367811996349,0.0659914975125385,0.84953765514008,0.0820300678865919,0.047702639484905,0.0848818454478942,-0.033831438617557,0.361331929367665,0.167491196496312,0.155133045974287,0.0971643273826423,0.14346186665431,0.0725527032817627,0.118078803663846,0.276755582834619,0.146457058852937,0.171606045898915,0.325236166177369,0.278103486845906,0.0214757195566333,0.190433848603603,0.0232417921452215,0.0621992810240301,0.0972149878005916,0.0196152055687711,-0.00108720901308782,-0.0927890947686115,-0.21949669833418,-0.233691394818359,-0.154350845857914,-0.146420369082019,0.0740871018858825,-0.0267097720155529,-0.124441925088187,-0.12408733780748,0.0706372465302585,0.139083200173165,0.0342545026818701,0.198560655516742,0.327212574771659,0.207517023930398,-0.035043890689815,-0.0297285094967998,-0.199602467287584,-0.205248216710164,-0.233691394818359,-0.0256386550596594,0.229470675167586,0.163809503152617,0.153782305733011,0.111762335566192,0.13074968267616,0.0948702099616913,0.0824973181082533,-0.0273975591060419,-0.142989732090036,-0.062865717988422,0.160016209285934,0.0706186668154308,0.106182380142196,0.268956184363084,0.233274230919611,0.151613543840272,0.0412847781546929,-0.070748463082013,0.121024215759104,0.10248573104008,0.0196072309723792,-0.233691394818359,-0.0135703721341641,-0.0204040279950575,-0.142814850486359,-0.140343146677755,-0.121684945123887,-0.186912109276296,-0.233691394818359,-0.176235961135323,-0.202887204867306,-0.212832019072321,-0.177997348788183,-0.233691394818359,-0.188077142390304,-0.189316833819489,0.142709795208316,0.231788353640996,0.1034753528135,0.0327180327692796,-0.196341220620061,-0.0757362107689915,-0.0992300796450409,-0.062865717988422,-0.136468658997767,-0.233691394818359,-0.13534145799619,-0.0975493957634924,-0.224599784452533,-0.111504102717092,-0.12168107221823,-0.15295929668725,-0.152537306043275,-0.117953913375777,0.366453718135094,0.404871090798306,0.356696159505811,0.170675328251701,0.235403669485477,0.12482419159272,0.201510001180046,0.124362146138488,0.0370445117966949,0.175549408881241,0.158791043126953,0.193862310860127,0.111643017066327,0.172207212614884,0.205132169469608,0.106463830509946,0.195110055858722,0.135441500458126,0.174426972071281,0.0555169725527869,0.0965363329353839,0.129112414954603,0.0641587151286066,0.135812732996219,0.145320367238345,0.143304811299127,0.137781728184059,-0.0121520575732715,0.11872828534032,0.192388088205808,0.229169574497983,0.170757610607397,0.0700884132731382,0.168468554801179,0.172935396806692,0.364705938178202,0.0661226204767377,0.055417661966551,0.0985339440497958,0.0122501955680295,-0.088094348470852|gostat_on_MCL_coexpression=|ontology_enrichment_celltype=CL:0000117!1.17e-10!23;CL:0000337!1.17e-10!23;CL:0000540!5.28e-10!33;CL:0000047!5.28e-10!33;CL:0000031!5.28e-10!33;CL:0000404!5.28e-10!33;CL:0000393!5.58e-08!39;CL:0000211!5.58e-08!39|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0000468!3.96e-08!333;UBERON:0010314!8.97e-07!92|tfbs_overrepresentation_for_novel_motifs=0.641384,0.801438,0.612053,0.688265,0.483253,0.704257,0.803568,0.370124,0.381467,0.162942,1.78549,0.790506,0.96877,0.81685,0.502646,0,1.02248,0.473993,0.352304,0.24402,0.570433,0.197567,0.815872,1.20979,0.620553,0.846564,0.342316,0.727368,1.32554,0.290745,0.711848,1.12823,0.471365,0.854272,0.503207,0.30022,0.460474,0.786577,0.434783,1.82692,0.478558,0.717547,0.544696,0.504971,1.63233,0.675898,0.938241,0.744678,0.162985,0.539131,1.0041,0.875451,0.771943,1.2746,1.29252,0.82458,0.549352,0.776619,0.331485,0.822375,1.10737,0.885556,0.39557,0.992216,0.8366,1.03484,1.43193,1.78579,1.1025,1.63712,1.44172,0.377213,1.12016,1.32691,3.2665,0.310084,0.318792,0.926147,1.08947,1.40903,0.37865,2.36887,0.884013,0.362446,1.20828,0.758875,0.129654,0.290918,0.943446,1.94914,1.50286,1.21342,1.14153,0.490141,0.430015,0.409166,0.367176,1.14445,0.938512,2.07187,0.460566,1.12793,1.25667,1.00472,1.00361,0.717061,1.06633,1.75347,0.580757,0.57247,0.633483,1.25851,0.576517,1.79716,1.51002,0.476467,2.70806,0.692434,1.02384,0.456123,1.33244,0.970073,0.848526,0.925183,1.56496,1.09333,0.812403,1.13449,1.43038,1.2358,1.23918,0.680176,1.40022,0.839311,1.53196,0.569254,0.650785,0.719099,1.482,2.31884,1.91709,1.43673,0.861473,1.1391,0.996781,0.718046,0.941555,2.27909,0.653418,0.485304,3.07746,1.63788,1.27621,0.416214,0.838313,1.35996,0.87653,0.516549,0.63863,0.650472,1.49167,1.20739,1.09379,2.58747,0.993294,0.830321,0.459159,0.788782,1.47798|tfbs_overrepresentation_jaspar=MA0003.1;2.33202,MA0004.1;0.6888,MA0006.1;0.497533,MA0007.1;0.672186,MA0009.1;1.15569,MA0014.1;1.46333,MA0017.1;1.30949,MA0019.1;0.964875,MA0024.1;1.11019,MA0025.1;1.39562,MA0027.1;2.81824,MA0028.1;0.509589,MA0029.1;1.08753,MA0030.1;1.09438,MA0031.1;1.05719,MA0038.1;0.846479,MA0040.1;1.16866,MA0041.1;0.604221,MA0042.1;0.589368,MA0043.1;1.25564,MA0046.1;1.1929,MA0048.1;0.735223,MA0050.1;0.731539,MA0051.1;0.856094,MA0052.1;1.17701,MA0055.1;1.28762,MA0056.1;0,MA0057.1;4.61304,MA0058.1;0.581673,MA0059.1;0.59559,MA0060.1;0.403071,MA0061.1;0.438628,MA0063.1;0,MA0066.1;0.834648,MA0067.1;1.50873,MA0068.1;0.256913,MA0069.1;1.17737,MA0070.1;1.16732,MA0071.1;0.73062,MA0072.1;1.15853,MA0073.1;0.0471131,MA0074.1;0.795862,MA0076.1;1.35592,MA0077.1;1.13603,MA0078.1;0.891476,MA0081.1;0.621611,MA0083.1;1.25482,MA0084.1;1.84013,MA0087.1;1.21037,MA0088.1;1.73268,MA0089.1;0,MA0090.1;0.650768,MA0091.1;0.703314,MA0092.1;0.651119,MA0093.1;0.519148,MA0095.1;0,MA0098.1;0,MA0100.1;0.783305,MA0101.1;0.605676,MA0103.1;0.540576,MA0105.1;4.16446,MA0106.1;0.899777,MA0107.1;0.533522,MA0108.2;0.989014,MA0109.1;0,MA0111.1;0.666525,MA0113.1;0.869608,MA0114.1;1.9466,MA0115.1;1.25852,MA0116.1;1.24367,MA0117.1;1.22527,MA0119.1;3.66271,MA0122.1;1.24573,MA0124.1;1.45461,MA0125.1;1.37907,MA0130.1;0,MA0131.1;0.960068,MA0132.1;0,MA0133.1;0,MA0135.1;1.29308,MA0136.1;0.817395,MA0139.1;0.957842,MA0140.1;0.78318,MA0141.1;0.563066,MA0142.1;1.04199,MA0143.1;0.887119,MA0144.1;0.439506,MA0145.1;0.608454,MA0146.1;1.07887,MA0147.1;1.15069,MA0148.1;0.706718,MA0149.1;0.611881,MA0062.2;0.856416,MA0035.2;0.788288,MA0039.2;3.52735,MA0138.2;0.951653,MA0002.2;0.368961,MA0137.2;0.559766,MA0104.2;1.0034,MA0047.2;0.845655,MA0112.2;4.21304,MA0065.2;2.53106,MA0150.1;0.67206,MA0151.1;0,MA0152.1;0.84577,MA0153.1;1.31015,MA0154.1;0.263609,MA0155.1;0.230016,MA0156.1;0.549102,MA0157.1;1.0083,MA0158.1;0,MA0159.1;2.0472,MA0160.1;0.71003,MA0161.1;0,MA0162.1;6.19111,MA0163.1;4.37465,MA0164.1;0.817786,MA0080.2;0.534538,MA0018.2;0.828253,MA0099.2;0.944966,MA0079.2;14.3219,MA0102.2;1.8929,MA0258.1;1.07695,MA0259.1;0.441366,MA0442.1;0}}
|coexpression_dpi_cluster_scores_mean=0.197708786816505,-0.240345197050245,-0.244898680030874,-0.225710124108631,-0.124732223807188,-0.182729044855865,-0.206531830679381,-0.238540654736889,-0.153399533242829,-0.0918761391459857,-0.303198418232895,-0.284121029738081,-0.268333019909414,-0.259404170686672,-0.058217768201063,-0.0804077948614746,-0.119124135067869,-0.308736333249517,-0.279594435380192,-0.184757888328015,-0.0332523317625182,-0.375216201237774,-0.340699896676282,-0.235546584920519,-0.245083380513381,-0.215300575830457,-0.272918706463528,-0.301667481253836,-0.350144087043031,-0.335830589335521,-0.284654970715247,0.157247411956645,0.152972753132847,-0.411528032786342,-0.165181720264333,-0.136518053335913,-0.0462824885772757,-0.186446691207871,-0.257663059565553,-0.244322889752308,-0.193189941366015,-0.234672262918563,-0.26339884723772,-0.0235701166748792,-0.0522815046783118,0.179774791006122,-0.0166529214476922,-0.13054269018306,-0.253279840775037,-0.166472476329017,0.0450346069907469,-0.107463141348333,-0.174354113303906,-0.123146830504769,-0.291649940206233,-0.120488080853964,-0.0801486896587602,-0.182804384097912,0.942062936900026,0.846393120407075,0.933536781971282,-0.179180987941136,0.0173344316129218,-0.26948643028352,-0.201294629273018,-0.217473345807083,-0.0188467609190511,-0.0935998980401005,0.0504717591731003,0.0878117301631997,-0.0115958228852101,0.512094358020771,0.347840151488977,0.633689040596611,0.592239731648855,0.658375680016294,0.174777731789681,0.153354369278997,0.232695407262434,0.627197912529789,0.522586598596443,0.61775960492707,0.355453298619776,0.0939263778826533,0.248792747194823,0.472586254709539,0.433248138622993,0.799750154051323,-0.181724554063448,-0.187101249647892,-0.044099884587461,-0.273018717169903,-0.20931043235453,-0.222661906052305,-0.182068535242248,-0.195893497116098,-0.212282961707489,-0.061710048411459,-0.0729781308340813,-0.0560047456070432,-0.0813158628650294,-0.214608745422076,0.0289385091879525,-0.0742961226700235,-0.153166529616924,-0.159967264226017,-0.100841804337098,-0.0924604472456588,-0.0768735991484185,0.83562344299776,0.278246733369951,0.311515351591864,0.358209179549395,0.370138075527172,0.421173206486102,0.704473772061699,-0.152792001969809,-0.196168214305431,-0.0475924637201998,-0.0398828172768249,-0.0275815617780735,-0.133004255017961,-0.206777804099273,0.0680730907178574,0.0385592442406875,-0.05112639484818,-0.252157750635074,-0.261026236817208,-0.253064358995883,0.197657803059213,0.315728967948535,0.67274397935845,-0.0723093700777374,-0.0601579941514062,0.0933540358192976,0.178071556109682,-0.00446026377739195,-0.129575259904162,-0.178735694755766,0.447717720654785,0.229402762571987,0.202977409464073,0.261095945310467,0.243407446783566,0.318159689469627,0.14278318160933,0.187278005663654,0.35521647336729,0.09427073863945,0.128949440858232,0.182057845289325,0.0579189770660174,0.0944299853000591,0.083298000541552,-0.0132163090194656,0.12406014406462,-0.316275161990238,-0.28137010778354,-0.243639358838797,0.233381126864638,0.151637792028371,0.127200377717271,0.201942412841135,0.101867102420196,0.122997033354334,0.0153913783470312,0.0758481395012828,0.0456299238465642,0.0581147043361912,-0.0457723547232677,-0.0690921170146279,-0.093144203865393,-0.144835774502098,-0.0976072511604766,-0.141111359057629,-0.0432950703705856,-0.261727377145202,-0.0550235515617099,0.214942751208937,0.20714502324193,0.200144265668995,0.117976254266813,0.0537473282712087,0.0711972427140571,-0.124460272058476,-0.0325111560785409,0.107109033913187,0.0980914079810446,-0.0102478730905884,-0.0920353740422221,-0.0765572431309748,-0.075800985899531,0.154584963522515,0.195048667293342,0.233837353709957,0.105983013701352,0.0979855841276326,0.134324409394139,-0.0229595105945785,-0.236851774695636,-0.135021695750592,-0.157641724643236,-0.104145904508673,0.0998378918378405,0.0809776410476188,0.0831811348034452,0.148801683194717,0.014239720549557,-0.0874532603869582,0.0647516012898947,-0.0138553442869374,-0.090015460887488,0.0812417219912223,-0.155576300417985,-0.105447976052391,-0.0707636901852993,-0.22710123510323,-0.186857691602597,0.0207897766684721,0.355927783772583,0.245578698453072,0.155192575795529,0.229727651425349,0.14559504296498,0.067497525475003,0.102707805540797,0.134793727816252,0.123043672913833,0.130699496237987,0.0917521873180562,0.0314217508962455,-0.0167011339431069,-0.178669105854234,-0.241051827910148,-0.175065796917068,-0.198427562892078,0.162029625047574,0.147218224806413,-0.0844887751029573,-0.150453761666757,0.0309759076743838,0.0421670354840713,0.109947612691097,-0.00590374808337812,0.0758051087151209,0.056013633610554,0.140366494441444,0.0561682723898084,-0.0162511421497165,0.849105639435543,0.0844906244507407,0.0247816493828975,0.0680132063212672,-0.0327551880133042,0.273634530300085,0.172349229767155,0.146772602462925,0.137903429591834,0.124233734199664,0.0585265572104432,0.0993579242067608,0.261355944654487,0.140227674703239,0.211737544718432,0.286025305280133,0.267792924923926,0.00182145557711345,0.158259623109404,0.0278238462765805,0.0771975135774748,0.081216289696293,0.0185002825948025,-0.00232425481298447,-0.0963604249395728,-0.195161187582058,-0.261949464972522,-0.291166425023274,-0.111807036841713,0.0733886852043428,-0.0406196537680884,-0.146116645789906,-0.132402854493243,0.0309190706603217,0.132323169285694,0.041669662308578,0.238177191187798,0.35499146729587,0.169237183875278,0.00566989708086513,-0.0243987813408494,-0.242362444080269,-0.270546879240056,-0.294633418753221,0.0170945875803553,0.271219030944821,0.163875318820652,0.150331911956691,0.132396922611205,0.139925848720189,0.0716702295607141,0.142986610037084,-0.0175099861151209,-0.182939934495677,-0.0640677600545345,0.119181880361082,0.0391564011675094,0.096521586892054,0.226293760887513,0.246633569326187,0.162577766578713,0.0708434430244755,-0.039466208498535,0.0666340273232513,0.0814405273087068,0.00126545979926885,-0.227944996153174,0.036549601495731,-0.0456973832918064,-0.155182573139323,-0.132255209256826,-0.185782697707119,-0.219513606742991,-0.254452016409797,-0.237083981195683,-0.246371838549534,-0.274195894524701,-0.290250297731479,-0.314539272205332,-0.222059149780474,-0.190983983580303,0.187066840813508,0.320691675621762,0.102907105992131,-0.028790448231238,-0.196669377726011,-0.107398943293284,-0.11875930992421,-0.0804536457556085,-0.140213331443442,-0.243906223718366,-0.10619118780552,-0.0915967641072697,-0.197712730641235,-0.180646269930268,-0.153974824368712,-0.145641873158841,-0.228348693009295,-0.130521856052824,0.369346253306475,0.464010062318732,0.349922796440837,0.240244121930943,0.231501443245987,0.154394228151713,0.183112900210814,0.135048478033423,0.0680419854865517,0.159100568256304,0.181734224843683,0.199966749235156,0.120628603926978,0.164096131402715,0.199454432153893,0.129921801802344,0.180746212791125,0.168153797437509,0.106498030065171,0.0524306201921277,0.0742530847209282,0.102088129890706,0.0643423105690741,0.0917844710677762,0.128362321766761,0.133283443937496,0.137435612256489,0.0411091448641727,0.13281522760486,0.139390505518351,0.181956952277343,0.171451583802259,0.0690555481420216,0.136789962894815,0.169788959289992,0.298453377755505,0.0731585628952185,0.0636961715467781,0.11217962694231,-0.0229032887764737,-0.0876571198946818
|coexpression_dpi_cluster_scores_median=0.190861982475838,-0.233691394818359,-0.233691394818359,-0.233691394818359,-0.166482468854374,-0.199992419599863,-0.233691394818359,-0.207320705625049,-0.135973389655722,-0.0334429999515636,-0.233691394818359,-0.233691394818359,-0.233691394818359,-0.233691394818359,-0.059959567363852,-0.0905878509113892,-0.11852290425691,-0.233691394818359,-0.181067674994459,-0.156876989887926,-0.0173794156125463,-0.233691394818359,-0.183299450085454,-0.20146381863152,-0.188843151129924,-0.135157031660495,-0.233691394818359,-0.148946710235155,-0.233691394818359,-0.233691394818359,-0.233691394818359,0.122346199056928,0.198511160227993,-0.233691394818359,-0.0795772753459727,-0.0660986412540357,-0.0411867670993954,-0.157771882700488,-0.233691394818359,-0.233691394818359,-0.215554205902092,-0.233691394818359,-0.233691394818359,-0.0242495376352403,-0.062865717988422,0.185765615773232,-0.0453241445913699,-0.0922408488783115,-0.233691394818359,-0.195111061743007,0.0501633926117107,-0.170825676829937,-0.177882549777876,-0.115251262571563,-0.233691394818359,-0.119862936773116,-0.13531780116587,-0.143388767758085,0.963966391707769,0.894342042393492,0.957702321059303,-0.121335658002849,-0.0326758126558424,-0.233691394818359,-0.2317635817161,-0.233691394818359,-0.00610749444806015,-0.119995608903708,0.0578437072086905,0.100684143111638,-0.0648132421814472,0.511420464300621,0.349501472233988,0.744620034080032,0.611211498619218,0.713420340866702,0.176596702916313,0.131937526447135,0.259646177477967,0.575648196556287,0.561979296759186,0.639843092110681,0.349496570060151,0.102666578776315,0.228740549146948,0.457257893697131,0.480927983808587,0.79602730511467,-0.133344387994929,-0.189319613524811,-0.071534384528166,-0.233691394818359,-0.233691394818359,-0.170825676829937,-0.170825676829937,-0.170825676829937,-0.205154332483863,-0.086641601352477,-0.062865717988422,-0.0138900929829209,-0.0743100322844545,-0.233691394818359,0.0165734007952529,-0.062865717988422,-0.128271219396567,-0.149108851622098,-0.056836119601827,-0.0421756550926942,-0.0793290093960899,0.870155914252692,0.251657191851348,0.273517533340117,0.385905265195455,0.38448806135596,0.395023391661329,0.705688091439765,-0.084398036973529,-0.204364646033839,-0.0332148676262832,-0.0235263164250765,-0.0288174579950655,-0.147846410130023,-0.233691394818359,0.0712861909758305,0.054402536550927,-0.013464787183951,-0.233691394818359,-0.233691394818359,-0.233691394818359,0.221368098372152,0.26582208394617,0.702017699449137,-0.11655457382547,0.008985865422548,0.0880675002527509,0.205692277764626,-0.00763388172500185,-0.145989436293729,-0.184763911118912,0.485608808055983,0.218819243829792,0.198217933797482,0.209942515779818,0.207462455256082,0.31595888737021,0.122951764339825,0.176369199940861,0.353659699244529,0.105745883881618,0.079726232649788,0.158899508648072,0.049122057339544,0.0875586947607101,0.100061272231913,-0.0266500095163996,0.0914940319572777,-0.233691394818359,-0.233691394818359,-0.233691394818359,0.241781911175723,0.216358167284636,0.107731307619421,0.198342703516581,0.102207776011299,0.117586137062129,-0.00333057663514258,0.0820136208534547,0.049141212362899,0.0674078557637899,-0.0231568196586384,-0.0778686466219727,-0.0249520609885403,-0.161945697970706,-0.094852948937464,-0.0597009402919545,-0.0507079982739446,-0.233691394818359,-0.0439929424261636,0.196060491928023,0.235935551680075,0.182575499199499,0.126344226718883,0.0351127628827075,0.0809993259867902,-0.149364726569757,-0.0215963270780511,0.107836605317852,0.126483749757555,0.0160668125854264,-0.0944495637280103,-0.0559126833590795,-0.0235540301775174,0.170121424412349,0.180146178468811,0.26799121996151,0.124708209670269,0.0934402545643867,0.113093984731468,-0.0072169043669197,-0.147622384280953,-0.0762066176778255,-0.146575891648584,-0.120934742722264,0.0554735382387335,0.0594664609288667,0.0850238551403945,0.187570495624612,0.00573915300492085,-0.062865717988422,0.0387678683054427,0.0170707904498383,-0.085968085022399,0.130622813066772,-0.146160568426972,-0.0990434279283829,-0.0331567409634251,-0.162031223805257,-0.148202316591937,0.00541631196668155,0.360317550983814,0.270345791327191,0.157952697069505,0.292811695522998,0.142887936592323,0.077804556472895,0.115289967736787,0.179472619028208,0.132122573137363,0.14837604820529,0.0795437332294649,0.0277780275205662,-0.0189530484464344,-0.186512534878532,-0.233691394818359,-0.146841293911974,-0.138263237291861,0.173775629471277,0.158085114461623,-0.062865717988422,-0.13592374115832,0.0424882944302191,0.112007886996279,0.136125662374947,-0.0163355333426264,0.05964888298096,0.0206672947163023,0.17096752224102,0.0618367811996349,0.0659914975125385,0.84953765514008,0.0820300678865919,0.047702639484905,0.0848818454478942,-0.033831438617557,0.361331929367665,0.167491196496312,0.155133045974287,0.0971643273826423,0.14346186665431,0.0725527032817627,0.118078803663846,0.276755582834619,0.146457058852937,0.171606045898915,0.325236166177369,0.278103486845906,0.0214757195566333,0.190433848603603,0.0232417921452215,0.0621992810240301,0.0972149878005916,0.0196152055687711,-0.00108720901308782,-0.0927890947686115,-0.21949669833418,-0.233691394818359,-0.154350845857914,-0.146420369082019,0.0740871018858825,-0.0267097720155529,-0.124441925088187,-0.12408733780748,0.0706372465302585,0.139083200173165,0.0342545026818701,0.198560655516742,0.327212574771659,0.207517023930398,-0.035043890689815,-0.0297285094967998,-0.199602467287584,-0.205248216710164,-0.233691394818359,-0.0256386550596594,0.229470675167586,0.163809503152617,0.153782305733011,0.111762335566192,0.13074968267616,0.0948702099616913,0.0824973181082533,-0.0273975591060419,-0.142989732090036,-0.062865717988422,0.160016209285934,0.0706186668154308,0.106182380142196,0.268956184363084,0.233274230919611,0.151613543840272,0.0412847781546929,-0.070748463082013,0.121024215759104,0.10248573104008,0.0196072309723792,-0.233691394818359,-0.0135703721341641,-0.0204040279950575,-0.142814850486359,-0.140343146677755,-0.121684945123887,-0.186912109276296,-0.233691394818359,-0.176235961135323,-0.202887204867306,-0.212832019072321,-0.177997348788183,-0.233691394818359,-0.188077142390304,-0.189316833819489,0.142709795208316,0.231788353640996,0.1034753528135,0.0327180327692796,-0.196341220620061,-0.0757362107689915,-0.0992300796450409,-0.062865717988422,-0.136468658997767,-0.233691394818359,-0.13534145799619,-0.0975493957634924,-0.224599784452533,-0.111504102717092,-0.12168107221823,-0.15295929668725,-0.152537306043275,-0.117953913375777,0.366453718135094,0.404871090798306,0.356696159505811,0.170675328251701,0.235403669485477,0.12482419159272,0.201510001180046,0.124362146138488,0.0370445117966949,0.175549408881241,0.158791043126953,0.193862310860127,0.111643017066327,0.172207212614884,0.205132169469608,0.106463830509946,0.195110055858722,0.135441500458126,0.174426972071281,0.0555169725527869,0.0965363329353839,0.129112414954603,0.0641587151286066,0.135812732996219,0.145320367238345,0.143304811299127,0.137781728184059,-0.0121520575732715,0.11872828534032,0.192388088205808,0.229169574497983,0.170757610607397,0.0700884132731382,0.168468554801179,0.172935396806692,0.364705938178202,0.0661226204767377,0.055417661966551,0.0985339440497958,0.0122501955680295,-0.088094348470852
|gostat_on_MCL_coexpression=
|ontology_enrichment_celltype=CL:0000117!1.17e-10!23;CL:0000337!1.17e-10!23;CL:0000540!5.28e-10!33;CL:0000047!5.28e-10!33;CL:0000031!5.28e-10!33;CL:0000404!5.28e-10!33;CL:0000393!5.58e-08!39;CL:0000211!5.58e-08!39
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000468!3.96e-08!333;UBERON:0010314!8.97e-07!92
|tfbs_overrepresentation_for_novel_motifs=0.641384,0.801438,0.612053,0.688265,0.483253,0.704257,0.803568,0.370124,0.381467,0.162942,1.78549,0.790506,0.96877,0.81685,0.502646,0,1.02248,0.473993,0.352304,0.24402,0.570433,0.197567,0.815872,1.20979,0.620553,0.846564,0.342316,0.727368,1.32554,0.290745,0.711848,1.12823,0.471365,0.854272,0.503207,0.30022,0.460474,0.786577,0.434783,1.82692,0.478558,0.717547,0.544696,0.504971,1.63233,0.675898,0.938241,0.744678,0.162985,0.539131,1.0041,0.875451,0.771943,1.2746,1.29252,0.82458,0.549352,0.776619,0.331485,0.822375,1.10737,0.885556,0.39557,0.992216,0.8366,1.03484,1.43193,1.78579,1.1025,1.63712,1.44172,0.377213,1.12016,1.32691,3.2665,0.310084,0.318792,0.926147,1.08947,1.40903,0.37865,2.36887,0.884013,0.362446,1.20828,0.758875,0.129654,0.290918,0.943446,1.94914,1.50286,1.21342,1.14153,0.490141,0.430015,0.409166,0.367176,1.14445,0.938512,2.07187,0.460566,1.12793,1.25667,1.00472,1.00361,0.717061,1.06633,1.75347,0.580757,0.57247,0.633483,1.25851,0.576517,1.79716,1.51002,0.476467,2.70806,0.692434,1.02384,0.456123,1.33244,0.970073,0.848526,0.925183,1.56496,1.09333,0.812403,1.13449,1.43038,1.2358,1.23918,0.680176,1.40022,0.839311,1.53196,0.569254,0.650785,0.719099,1.482,2.31884,1.91709,1.43673,0.861473,1.1391,0.996781,0.718046,0.941555,2.27909,0.653418,0.485304,3.07746,1.63788,1.27621,0.416214,0.838313,1.35996,0.87653,0.516549,0.63863,0.650472,1.49167,1.20739,1.09379,2.58747,0.993294,0.830321,0.459159,0.788782,1.47798
}}

Latest revision as of 18:23, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr2:34227446..34227511,-p1@Pbx3
Mm9::chr2:34228111..34228118,-p@chr2:34228111..34228118
-
Mm9::chr2:34228160..34228171,-p@chr2:34228160..34228171
-
Mm9::chr2:34228183..34228280,-p@chr2:34228183..34228280
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Cell Type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.17e-1023
neuroblast (sensu Vertebrata)1.17e-1023
neuron5.28e-1033
neuronal stem cell5.28e-1033
neuroblast5.28e-1033
electrically signaling cell5.28e-1033
electrically responsive cell5.58e-0839
electrically active cell5.58e-0839

Uber Anatomy
Ontology termp-valuen
multi-cellular organism3.96e-08333
structure with developmental contribution from neural crest8.97e-0792


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.12.33202
MA0004.10.6888
MA0006.10.497533
MA0007.10.672186
MA0009.11.15569
MA0014.11.46333
MA0017.11.30949
MA0019.10.964875
MA0024.11.11019
MA0025.11.39562
MA0027.12.81824
MA0028.10.509589
MA0029.11.08753
MA0030.11.09438
MA0031.11.05719
MA0038.10.846479
MA0040.11.16866
MA0041.10.604221
MA0042.10.589368
MA0043.11.25564
MA0046.11.1929
MA0048.10.735223
MA0050.10.731539
MA0051.10.856094
MA0052.11.17701
MA0055.11.28762
MA0056.10
MA0057.14.61304
MA0058.10.581673
MA0059.10.59559
MA0060.10.403071
MA0061.10.438628
MA0063.10
MA0066.10.834648
MA0067.11.50873
MA0068.10.256913
MA0069.11.17737
MA0070.11.16732
MA0071.10.73062
MA0072.11.15853
MA0073.10.0471131
MA0074.10.795862
MA0076.11.35592
MA0077.11.13603
MA0078.10.891476
MA0081.10.621611
MA0083.11.25482
MA0084.11.84013
MA0087.11.21037
MA0088.11.73268
MA0089.10
MA0090.10.650768
MA0091.10.703314
MA0092.10.651119
MA0093.10.519148
MA0095.10
MA0098.10
MA0100.10.783305
MA0101.10.605676
MA0103.10.540576
MA0105.14.16446
MA0106.10.899777
MA0107.10.533522
MA0108.20.989014
MA0109.10
MA0111.10.666525
MA0113.10.869608
MA0114.11.9466
MA0115.11.25852
MA0116.11.24367
MA0117.11.22527
MA0119.13.66271
MA0122.11.24573
MA0124.11.45461
MA0125.11.37907
MA0130.10
MA0131.10.960068
MA0132.10
MA0133.10
MA0135.11.29308
MA0136.10.817395
MA0139.10.957842
MA0140.10.78318
MA0141.10.563066
MA0142.11.04199
MA0143.10.887119
MA0144.10.439506
MA0145.10.608454
MA0146.11.07887
MA0147.11.15069
MA0148.10.706718
MA0149.10.611881
MA0062.20.856416
MA0035.20.788288
MA0039.23.52735
MA0138.20.951653
MA0002.20.368961
MA0137.20.559766
MA0104.21.0034
MA0047.20.845655
MA0112.24.21304
MA0065.22.53106
MA0150.10.67206
MA0151.10
MA0152.10.84577
MA0153.11.31015
MA0154.10.263609
MA0155.10.230016
MA0156.10.549102
MA0157.11.0083
MA0158.10
MA0159.12.0472
MA0160.10.71003
MA0161.10
MA0162.16.19111
MA0163.14.37465
MA0164.10.817786
MA0080.20.534538
MA0018.20.828253
MA0099.20.944966
MA0079.214.3219
MA0102.21.8929
MA0258.11.07695
MA0259.10.441366
MA0442.10
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:2346&oldid=3074345"