FFCP PHASE1:Hg19::chr1:44956567..44956571,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:44956567..44956571,+ | |||
|id=chr1:44956567..44956571,+ | |||
|ontology_enrichment_celltype=CL:0001024!7.39e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.86e-63!57;UBERON:0005068!5.86e-63!57;UBERON:0006241!5.86e-63!57;UBERON:0007135!5.86e-63!57;UBERON:0002616!2.09e-51!59;UBERON:0002020!2.48e-46!34;UBERON:0003528!2.48e-46!34;UBERON:0000955!1.28e-42!69;UBERON:0006238!1.28e-42!69;UBERON:0002791!2.69e-42!33;UBERON:0001017!9.70e-42!82;UBERON:0001893!5.54e-41!34;UBERON:0003075!4.17e-40!86;UBERON:0007284!4.17e-40!86;UBERON:0005743!1.38e-39!86;UBERON:0002346!4.27e-38!90;UBERON:0002780!6.96e-38!41;UBERON:0001890!6.96e-38!41;UBERON:0006240!6.96e-38!41;UBERON:0003080!6.53e-37!42;UBERON:0000073!2.17e-35!94;UBERON:0001016!2.17e-35!94;UBERON:0001869!2.09e-33!32;UBERON:0007023!2.04e-31!115;UBERON:0002308!4.72e-29!9;UBERON:0000125!4.72e-29!9;UBERON:0003076!2.38e-28!15;UBERON:0003057!2.38e-28!15;UBERON:0002619!2.21e-26!22;UBERON:0002298!1.09e-24!8;UBERON:0003056!2.16e-24!61;UBERON:0000033!6.12e-24!123;UBERON:0000956!4.27e-23!25;UBERON:0000203!4.27e-23!25;UBERON:0000153!1.37e-22!129;UBERON:0007811!1.37e-22!129;UBERON:0004733!1.09e-21!12;UBERON:0002028!1.09e-21!12;UBERON:0007277!1.09e-21!12;UBERON:0004732!5.92e-20!13;UBERON:0001950!2.51e-19!20;UBERON:0009663!3.58e-19!7;UBERON:0006331!5.52e-18!3;UBERON:0000988!7.32e-18!3;UBERON:0004121!1.74e-17!169;UBERON:0000924!5.86e-17!173;UBERON:0006601!5.86e-17!173;UBERON:0002680!1.70e-15!9;UBERON:0001895!1.70e-15!9;UBERON:0010092!1.70e-15!9;UBERON:0002420!7.12e-15!9;UBERON:0007245!7.12e-15!9;UBERON:0010009!7.12e-15!9;UBERON:0010011!7.12e-15!9;UBERON:0000454!7.12e-15!9;UBERON:0000025!9.42e-15!194;UBERON:0002148!1.81e-12!2;UBERON:0009662!1.81e-12!2;UBERON:0000369!2.64e-12!4;UBERON:0002435!2.64e-12!4;UBERON:0000204!2.64e-12!4;UBERON:0010082!2.64e-12!4;UBERON:0001954!4.43e-12!2;UBERON:0003022!4.43e-12!2;UBERON:0002421!4.43e-12!2;UBERON:0002600!4.43e-12!2;UBERON:0004111!8.71e-11!241;UBERON:0001872!1.47e-10!5;UBERON:0002021!2.32e-10!5;UBERON:0000349!2.72e-10!5;UBERON:0000477!4.28e-09!286;UBERON:0000200!1.71e-08!6;UBERON:0002240!2.04e-08!3;UBERON:0000064!4.10e-08!219;UBERON:0002771!4.23e-08!3;UBERON:0001896!5.85e-08!3;UBERON:0005290!5.85e-08!3;UBERON:0010096!5.85e-08!3;UBERON:0005383!6.06e-08!3;UBERON:0005382!6.06e-08!3;UBERON:0002038!3.13e-07!1;UBERON:0009661!3.13e-07!1;UBERON:0000483!3.44e-07!309;UBERON:0000119!4.56e-07!312;UBERON:0002336!5.26e-07!1;UBERON:0001018!5.26e-07!1;UBERON:0002473!5.26e-07!1;UBERON:0005340!5.26e-07!1;UBERON:0002316!5.26e-07!1;UBERON:0003544!5.26e-07!1;UBERON:0001020!5.26e-07!1;UBERON:0005970!5.26e-07!1;UBERON:0002437!5.26e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;3.34e-66;1!UBERON:0009661;3.34e-66;1!UBERON:0002950;3.34e-66;1!UBERON:0001891;3.34e-66;1!UBERON:0001872;1.40e-14;5!UBERON:0009663;9.43e-11;7!UBERON:0002420;1.16e-08;9!UBERON:0000125;1.16e-08;9!UBERON:0007245;1.16e-08;9!UBERON:0002308;1.16e-08;9!UBERON:0010009;1.16e-08;9!UBERON:0010011;1.16e-08;9!UBERON:0000454;1.16e-08;9!UBERON:0003528;2.46e-07;34!UBERON:0002020;2.46e-07;34!UBERON:0001893;2.46e-07;34!UBERON:0002791;2.47e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,2.39e-66,1;UBERON:0009661,2.39e-66,1;UBERON:0002950,2.39e-66,1;UBERON:0001891,2.39e-66,1;UBERON:0009616,2.39e-66,1;UBERON:0010286,2.39e-66,1;UBERON:0001872,1.40e-14,5;UBERON:0009663,8.99e-11,7;UBERON:0002791,3.79e-09,32;UBERON:0003528,1.09e-08,34;UBERON:0002020,1.09e-08,34;UBERON:0001893,1.09e-08,34;UBERON:0002420,1.12e-08,9;UBERON:0000125,1.12e-08,9;UBERON:0007245,1.12e-08,9;UBERON:0002308,1.12e-08,9;UBERON:0010009,1.12e-08,9;UBERON:0010011,1.12e-08,9;UBERON:0000454,1.12e-08,9;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.383010740264733,0.423347165447766,0,1.12318871245384,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34323429584154,0.413373593002368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543757863814654,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,1.57673541466596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:44956567..44956571,+ | |||
}} |
Revision as of 18:16, 10 January 2014
Short description: | p@chr1:44956567..44956571, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:44956567..44956571, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
substantia nigra | 2.39e-66 | 1 |
midbrain nucleus | 2.39e-66 | 1 |
regional part of midbrain | 2.39e-66 | 1 |
midbrain | 2.39e-66 | 1 |
presumptive midbrain | 2.39e-66 | 1 |
midbrain neural tube | 2.39e-66 | 1 |
parietal lobe | 1.40e-14 | 5 |
telencephalic nucleus | 8.99e-11 | 7 |
regional part of telencephalon | 3.79e-09 | 32 |
brain grey matter | 1.09e-08 | 34 |
gray matter | 1.09e-08 | 34 |
telencephalon | 1.09e-08 | 34 |
basal ganglion | 1.12e-08 | 9 |
neural nucleus | 1.12e-08 | 9 |
nuclear complex of neuraxis | 1.12e-08 | 9 |
nucleus of brain | 1.12e-08 | 9 |
aggregate regional part of brain | 1.12e-08 | 9 |
collection of basal ganglia | 1.12e-08 | 9 |
cerebral subcortex | 1.12e-08 | 9 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |