FFCP PHASE1:Hg19::chr1:142537912..142537938,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C390 | |||
|description=CAGE_peak_at_chr1:142537912..142537938,- | |||
|id=chr1:142537912..142537938,- | |||
|ontology_enrichment_celltype=CL:0000047!3.50e-15!8;CL:0002583!5.55e-10!2;CL:0002334!4.21e-09!12;CL:0000540!6.35e-08!6;CL:0000031!6.35e-08!6;CL:0000404!6.35e-08!6;CL:0000214!1.82e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.01e-40;2!CL:0000540;1.52e-30;6!CL:0000404;1.52e-30;6!CL:0000214;1.82e-27;3!CL:0002591;6.31e-21;1!CL:0002319;1.40e-18;25!CL:0002195;3.70e-11;2!CL:0002571;3.70e-11;2!CL:0000153;7.74e-10;9!CL:0000447;7.74e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.40e-62,8;CL:0000540,1.25e-30,6;CL:0000031,1.25e-30,6;CL:0000404,1.25e-30,6;CL:0000214,1.82e-27,3;CL:0002591,7.72e-21,1;CL:0002319,1.26e-18,25;CL:0002195,4.52e-11,2;CL:0002571,4.52e-11,2;CL:0000153,7.74e-10,9;CL:0000447,7.74e-10,9;CL:0000133,2.57e-08,59;CL:0000221,7.33e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.52e-30;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006915!1.82e-07!3;UBERON:0002018!1.82e-07!3;UBERON:0002217!1.82e-07!3;UBERON:0007616!1.82e-07!3;UBERON:0003978!4.05e-07!3;UBERON:0009751!4.05e-07!3;UBERON:0000946!4.05e-07!3;UBERON:0002523!4.05e-07!3;UBERON:0005983!4.05e-07!3;UBERON:0002165!4.05e-07!3;UBERON:0002062!4.05e-07!3;UBERON:0007280!4.05e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.82e-27;3!UBERON:0007616;1.82e-27;3!UBERON:0002217;1.82e-27;3!UBERON:0002018;1.82e-27;3!UBERON:0000078;3.70e-11;2!UBERON:0002012;3.70e-11;2!UBERON:0008886;3.70e-11;2!UBERON:0004905;5.98e-11;8!UBERON:0000982;5.98e-11;8!UBERON:0004770;5.98e-11;8!UBERON:0004457;7.74e-10;9!UBERON:0000042;7.74e-10;9!UBERON:0006914;8.82e-08;25!UBERON:0000486;1.33e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.82e-27,3;UBERON:0007616,1.82e-27,3;UBERON:0002217,1.82e-27,3;UBERON:0002018,1.82e-27,3;UBERON:0000078,4.09e-11,2;UBERON:0007497,4.09e-11,2;UBERON:0003643,4.09e-11,2;UBERON:0003504,4.09e-11,2;UBERON:0003469,4.09e-11,2;UBERON:0003496,4.09e-11,2;UBERON:0002012,4.09e-11,2;UBERON:0008886,4.09e-11,2;UBERON:0007303,4.09e-11,2;UBERON:0002061,4.09e-11,2;UBERON:0005432,4.09e-11,2;UBERON:0004363,4.09e-11,2;UBERON:0004905,5.98e-11,8;UBERON:0000982,5.98e-11,8;UBERON:0004770,5.98e-11,8;UBERON:0004145,7.76e-08,3;UBERON:0006914,8.82e-08,25;UBERON:0004457,1.33e-07,12;UBERON:0000042,1.33e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00084595560703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77866236955724,7.8083912314573,9.27946575333234,1.84267891867784,26.7934275694329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0.355123450626254,0.246381468041427,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,2.11107635297664,4.61012850143863,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:142537912..142537938,- | |||
}} |
Revision as of 20:26, 10 January 2014
Short description: | p@chr1:142537912..142537938, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:142537912..142537938, - |
Coexpression cluster: | C390_Neurons_Synoviocyte_optic_Neural_heart_umbilical_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.40e-62 | 8 |
neuron | 1.25e-30 | 6 |
neuroblast | 1.25e-30 | 6 |
electrically signaling cell | 1.25e-30 | 6 |
synovial cell | 1.82e-27 | 3 |
smooth muscle cell of the pulmonary artery | 7.72e-21 | 1 |
neural cell | 1.26e-18 | 25 |
hepatic stem cell | 4.52e-11 | 2 |
hepatic mesenchymal stem cell | 4.52e-11 | 2 |
GAG secreting cell | 7.74e-10 | 9 |
carbohydrate secreting cell | 7.74e-10 | 9 |
neurectodermal cell | 2.57e-08 | 59 |
ectodermal cell | 7.33e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.82e-27 | 3 |
layer of synovial tissue | 1.82e-27 | 3 |
synovial joint | 1.82e-27 | 3 |
synovial membrane of synovial joint | 1.82e-27 | 3 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.09e-11 | 2 |
developing epithelial placode | 4.09e-11 | 2 |
respiratory system arterial blood vessel | 4.09e-11 | 2 |
respiratory system blood vessel | 4.09e-11 | 2 |
respiratory system artery | 4.09e-11 | 2 |
head blood vessel | 4.09e-11 | 2 |
pulmonary artery | 4.09e-11 | 2 |
pulmonary vascular system | 4.09e-11 | 2 |
pharyngeal vasculature | 4.09e-11 | 2 |
truncus arteriosus | 4.09e-11 | 2 |
aortic sac | 4.09e-11 | 2 |
pharyngeal arch artery | 4.09e-11 | 2 |
articulation | 5.98e-11 | 8 |
skeletal joint | 5.98e-11 | 8 |
articular system | 5.98e-11 | 8 |
outflow tract | 7.76e-08 | 3 |
squamous epithelium | 8.82e-08 | 25 |
cavity lining | 1.33e-07 | 12 |
serous membrane | 1.33e-07 | 12 |