FFCP PHASE1:Hg19::chr1:155959162..155959216,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9181 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=682 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z977 | |||
|association_with_transcript=73bp_to_ENST00000435736,uc010pgu.1_5end | |||
|description=CAGE_peak_10_at_ARHGEF2_5end | |||
|id=chr1:155959162..155959216,- | |||
|ontology_enrichment_celltype=CL:0002057!1.62e-20!42;CL:0000860!1.64e-18!45;CL:0002194!1.13e-14!63;CL:0000576!1.13e-14!63;CL:0000040!1.13e-14!63;CL:0000559!1.13e-14!63;CL:0002009!1.34e-13!65;CL:0000557!1.37e-11!71;CL:0000839!3.08e-11!70;CL:0000766!4.52e-11!76;CL:0002393!3.12e-07!9;CL:0002397!3.12e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.80e-16;33!CL:0002057;9.80e-16;33!CL:0000473;1.63e-14;39!CL:0000234;1.63e-14;39!CL:0000576;1.25e-12;48!CL:0000153;3.19e-10;9!CL:0000447;3.19e-10;9!CL:0000138;1.42e-09;6!CL:0000766;2.69e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.14e-25,48;CL:0000234,1.14e-25,48;CL:0000860,1.04e-24,42;CL:0002057,1.04e-24,42;CL:0002194,2.04e-19,59;CL:0000576,2.04e-19,59;CL:0000040,2.04e-19,59;CL:0000559,2.04e-19,59;CL:0002009,2.07e-18,61;CL:0000766,7.84e-17,72;CL:0000557,8.84e-17,67;CL:0000839,3.57e-16,66;CL:0000153,2.99e-10,9;CL:0000447,2.99e-10,9;CL:0002393,4.57e-10,9;CL:0002397,4.57e-10,9;CL:0000058,1.76e-09,6;CL:0000138,1.76e-09,6;CL:0000763,3.61e-08,108;CL:0000049,3.61e-08,108;CL:0002087,4.09e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.48e-23!115;UBERON:0000467!5.33e-12!625;UBERON:0000480!7.82e-12!626;UBERON:0000468!1.11e-11!659;UBERON:0000479!1.79e-10!787;UBERON:0002390!3.07e-10!102;UBERON:0003061!3.07e-10!102;UBERON:0003081!5.04e-10!216;UBERON:0002193!8.41e-10!112;UBERON:0004765!1.95e-08!101;UBERON:0001434!1.95e-08!101;UBERON:0002371!3.02e-08!80;UBERON:0001474!4.03e-08!86;UBERON:0000923!9.35e-08!604;UBERON:0005291!9.35e-08!604;UBERON:0006598!9.35e-08!604;UBERON:0002532!9.35e-08!604;UBERON:0002050!1.27e-07!605;UBERON:0005423!1.27e-07!605;UBERON:0000062!1.30e-07!511;UBERON:0000922!2.12e-07!612;UBERON:0000926!6.37e-07!448;UBERON:0004120!6.37e-07!448;UBERON:0006603!6.37e-07!448;UBERON:0002204!6.63e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.98e-14,98;UBERON:0003061,3.98e-14,98;UBERON:0001474,1.04e-13,82;UBERON:0002371,1.76e-13,76;UBERON:0002193,3.03e-13,108;UBERON:0007023,7.16e-13,114;UBERON:0002405,1.77e-12,93;UBERON:0001434,2.67e-12,100;UBERON:0003081,1.35e-11,203;UBERON:0004765,1.71e-11,90;UBERON:0002204,3.76e-07,167;UBERON:0004797,8.42e-07,7 | |||
|phase1_expression=0.908391896352783,0,1.12763523276777,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,1.18009283054671,1.53531759238885,0,0,0,0.739508020333575,0,0,0,2.21598163412751,2.20598892217156,0.651032612147555,0,0,0,3.63495596948912,4.91238726795452,3.63876091781724,3.25400651667958,5.34518254428373,5.88442104700697,0.863077176966451,1.2808035326455,1.18241114944293,1.72372840368309,5.80936215225443,0,8.28266293987461,7.36846605156184,2.47195832889593,5.50951006267625,8.98601275813062,3.19668562899521,0,0.598390972864896,0.426224750532694,2.32167390902867,1.13477044938228,0.622822248995575,1.25624332628372,4.69334626578181,0.65156653411535,0.605399502633369,0.736555271975129,0.632924774881769,6.5489138756702,6.37812899895131,4.40283155567589,2.47122988522289,1.20141514273205,1.92870704036496,3.99017841237748,2.98375015798635,3.83594722905731,0,0,1.77901850772711,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0.670700859703636,0.255725123687061,7.59022220007589,2.00535164254356,3.76600949298142,6.36228757640879,4.86634870302636,0,0,0,2.48860243445654,0,0,0.324547393654683,0.348259474598534,0.531831842075461,0,0,0,0.39752481473341,1.72046919021225,1.38856200643038,1.13061588384802,1.67799774483962,1.6507082516404,0.417989933073621,0,0,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,1.10298924103761,0.81014194788176,0.446498641420399,0.44905874525234,0,0,0,0.366403487860815,1.31780417436063,0,0,0.993943903390637,1.77282716330412,1.05927344650575,4.01571269048339,2.12801029319014,0,0,0.24666754841716,0.311211035399766,0.404132016209064,0.326923806226917,0,0,1.64025002283658,0.624320153660641,0.570471821544449,0.597794722207204,0.352303495931295,0,0,1.22492502752936,0.368502951935304,2.06651562351531,0,0.989067717114227,0,1.43723628363248,0.505008341862199,0,0.554128230968366,1.31693286264251,0.919463387397059,1.35214253015937,0.113432183160021,0.717558542755448,0.640672166455702,0.423863802319124,0.300091096084402,0.412210116953756,1.8034837803194,0.930584281657949,1.35021065793013,1.46155507741798,2.27190396819703,0.552299391853796,1.77810662500693,1.42003837006646,0.503760491138201,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0.977424915930974,0,0,0,0,0.144366447761074,0,0,0,0,0.984868024349589,2.57404691653161,3.56714789492948,0,0,0,0.806026704325635,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,6.32501818449095,1.67737398844108,2.29723871668228,0,0,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0.542530047399471,0,0.713715955188647,0.473107245101804,0.937131319941706,2.10662269809403,2.27407504055985,6.2083842775503,0.664225598535437,0.368738337083406,0.347534457872331,0,0,1.03384013061444,1.2942852049117,1.49418580924822,0,0,0,2.48107807818777,0.920771839728375,0.280660094433074,1.66580894032411,0.511707249066704,0.804269605718038,2.96836132889982,0,0,0.246381468041427,0,0,0,0,0.184161977871793,0.918515585316854,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.515205058238611,0,0.082509499920588,0,0,0,0.290012154876366,0,0.15350367472613,0,0.537101224341368,0.290033387828457,0.170453254832202,0.356128142586949,0.165284915360978,0,0,0.10115778085555,3.71876439437829,0.62962469366128,0,0.308033580176089,0,0,0.55597265731176,1.00187420719394,0,0,0,0.255897791311334,0.855877976067841,0.636406495851874,1.56989728039846,0,0,0,0,0,0,0.48763373908959,0.974853958525138,2.11300293513511,0.136499911407986,0.565621727814851,0,1.65409603063837,1.32687795048244,0.876901770507525,0,0,0.405820753925408,0,0,0.143411352204052,0.196498082026242,0,0,2.74439925886963,2.63435914367922,0,2.44954304171488,0,0,0,0.847294206991012,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0.476463550915578,1.23408681925858,1.29694662238543,0.540031437238115,0.79312517629427,0,8.66231869737023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,2.19762268907841,0,0,0,0,0,0,0,0.703347082052564,0.111308705022906,0,0,8.96615947129814,0.828851746593443,0,0.102268682502155,0,0.622079175323615,0,0.179021174675609,0,0.591860433821602,0,0,0,1.66982576691332,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.241192877250816,1.52581736317083,2.76448149828062,5.91095237907095,1.31631238292384,0,0,3.30886111566327,0.341826167541004,0,0.0897576444097721,0,0,0,0,0,0,0.997270091400938,0,0,0,0,0,0,0,0,0,0,0.796118080530053,1.83309043480088,0,0,0,1.21322039365219,0,1.40558667435203,0.182454789215666,0,0.971121518136371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| |||
|short_description=p10@ARHGEF2 | |||
}} |
Revision as of 21:21, 10 January 2014
Short description: | p10@ARHGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ARHGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 73bp_to_ENST00000435736, uc010pgu.1_5end |
EntrezGene: | ARHGEF2 |
HGNC: | 682 |
UniProt: | B7Z977 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.14e-25 | 48 |
phagocyte | 1.14e-25 | 48 |
classical monocyte | 1.04e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-24 | 42 |
monopoietic cell | 2.04e-19 | 59 |
monocyte | 2.04e-19 | 59 |
monoblast | 2.04e-19 | 59 |
promonocyte | 2.04e-19 | 59 |
macrophage dendritic cell progenitor | 2.07e-18 | 61 |
myeloid leukocyte | 7.84e-17 | 72 |
granulocyte monocyte progenitor cell | 8.84e-17 | 67 |
myeloid lineage restricted progenitor cell | 3.57e-16 | 66 |
GAG secreting cell | 2.99e-10 | 9 |
carbohydrate secreting cell | 2.99e-10 | 9 |
intermediate monocyte | 4.57e-10 | 9 |
CD14-positive, CD16-positive monocyte | 4.57e-10 | 9 |
chondroblast | 1.76e-09 | 6 |
chondrocyte | 1.76e-09 | 6 |
myeloid cell | 3.61e-08 | 108 |
common myeloid progenitor | 3.61e-08 | 108 |
nongranular leukocyte | 4.09e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.98e-14 | 98 |
blood island | 3.98e-14 | 98 |
bone element | 1.04e-13 | 82 |
bone marrow | 1.76e-13 | 76 |
hemolymphoid system | 3.03e-13 | 108 |
adult organism | 7.16e-13 | 114 |
immune system | 1.77e-12 | 93 |
skeletal system | 2.67e-12 | 100 |
lateral plate mesoderm | 1.35e-11 | 203 |
skeletal element | 1.71e-11 | 90 |
musculoskeletal system | 3.76e-07 | 167 |
blood vessel layer | 8.42e-07 | 7 |