FFCP PHASE1:Hg19::chr10:21854898..21854902,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:21854898..21854902,+ | |||
|id=chr10:21854898..21854902,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.78e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;2.13e-07;1!DOID:10165;2.13e-07;1!DOID:1798;2.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.62e-07,1;DOID:10165,3.62e-07,1;DOID:1798,3.62e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.47e-16!115;UBERON:0001049!9.40e-15!57;UBERON:0005068!9.40e-15!57;UBERON:0006241!9.40e-15!57;UBERON:0007135!9.40e-15!57;UBERON:0001017!5.97e-13!82;UBERON:0000073!1.21e-12!94;UBERON:0001016!1.21e-12!94;UBERON:0005743!3.53e-12!86;UBERON:0002346!7.07e-12!90;UBERON:0000955!7.71e-12!69;UBERON:0006238!7.71e-12!69;UBERON:0002616!2.00e-11!59;UBERON:0003080!3.63e-11!42;UBERON:0002780!1.30e-10!41;UBERON:0001890!1.30e-10!41;UBERON:0006240!1.30e-10!41;UBERON:0003075!2.67e-10!86;UBERON:0007284!2.67e-10!86;UBERON:0002020!1.12e-09!34;UBERON:0003528!1.12e-09!34;UBERON:0001893!1.90e-09!34;UBERON:0002791!4.54e-09!33;UBERON:0001869!1.59e-08!32;UBERON:0001950!1.41e-07!20;UBERON:0002619!1.77e-07!22;UBERON:0000956!2.51e-07!25;UBERON:0000203!2.51e-07!25;UBERON:0003056!6.60e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;4.85e-09;3!UBERON:0005382;4.85e-09;3!UBERON:0002791;4.94e-08;32!UBERON:0000941;6.78e-08;1!UBERON:0001785;6.78e-08;1!UBERON:0002464;6.78e-08;1!UBERON:0004904;6.78e-08;1!UBERON:0001021;6.78e-08;1!UBERON:0002134;7.97e-08;1!UBERON:0005208;7.97e-08;1!UBERON:0004145;7.97e-08;1!UBERON:0005946;7.97e-08;1!UBERON:0005965;7.97e-08;1!UBERON:0002078;7.97e-08;1!UBERON:0001869;1.44e-07;32!UBERON:0007029;2.13e-07;1!UBERON:0001874;2.13e-07;1!UBERON:0003112;2.13e-07;1!UBERON:0011158;2.13e-07;1!UBERON:0003128;2.13e-07;1!UBERON:0001703;2.13e-07;1!UBERON:0002241;2.13e-07;1!UBERON:0001950;3.91e-07;20!UBERON:0001893;4.18e-07;34!UBERON:0000369;5.53e-07;4!UBERON:0002435;5.53e-07;4!UBERON:0000204;5.53e-07;4!UBERON:0003528;6.14e-07;34!UBERON:0002020;6.14e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,3.52e-09,3;UBERON:0005382,3.52e-09,3;UBERON:0002791,2.32e-08,32;UBERON:0001869,2.32e-08,32;UBERON:0000941,6.59e-08,1;UBERON:0001785,6.59e-08,1;UBERON:0002464,6.59e-08,1;UBERON:0004904,6.59e-08,1;UBERON:0001021,6.59e-08,1;UBERON:0003902,6.59e-08,1;UBERON:0005425,6.59e-08,1;UBERON:0003528,7.84e-08,34;UBERON:0002020,7.84e-08,34;UBERON:0001893,7.84e-08,34;UBERON:0002134,8.54e-08,1;UBERON:0005208,8.54e-08,1;UBERON:0005946,8.54e-08,1;UBERON:0005965,8.54e-08,1;UBERON:0002078,8.54e-08,1;UBERON:0007029,9.71e-08,1;UBERON:0001874,1.83e-07,1;UBERON:0001016,2.33e-07,89;UBERON:0003112,2.83e-07,1;UBERON:0011158,2.83e-07,1;UBERON:0003128,2.83e-07,1;UBERON:0001703,2.83e-07,1;UBERON:0002241,2.83e-07,1;UBERON:0004761,2.83e-07,1;UBERON:0009617,2.83e-07,1;UBERON:0001950,3.18e-07,20;UBERON:0000369,4.35e-07,4;UBERON:0002435,4.35e-07,4;UBERON:0000204,4.35e-07,4;UBERON:0010082,4.35e-07,4;UBERON:0001017,6.21e-07,81 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.251085279189606,0.0764134057479513,0.410502947249729,0.472264687882075,0,0,0.154816123316076,0,0,0,0.387336002901508,0.142169232487422,0,0.553995408531877,0.401088894940283,0.434021741431704,0.447830948479849,0.647787332037959,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0,0,0.941211697713023,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0.764546456250458,1.32171328579026,0,0,0,0,0.616804496998528,0,0.32592226663359,0,0,0.222820913770347,0.589211814949674,0.664601683750863,0.270803863765016,0.512365278902701,0,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.339928028092699,0,0.68725489096526,0,0,0,0,0.301150238155546,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0.351339142772504,0.785874452986276,0,0,0,0.696518949197069,0.26591592103773,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0.760272105718513,0,0,0,0.17859945656816,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0.485618833104395,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0.358779271377724,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0.265059536642971,0,0.10366105501537,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0.288239906833923,0,0.126995788584338,0,0,0,0,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0.179060963239896,0.112085143993527,0,0,0.641715181398742,0.508189248444927,1.30139853857622,0,0,0.637938751653163,0,2.99161459204025,0.414415513436035,0,0.500170521059677,0,0,0.356857977594324,0.157702415033935,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0.426910231213777,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0.241718899183244,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0.27470839445503,0.577566499444116,0,0,0,0.096670718292122,0,0,0.413509717453592,0.429680979473094,0.580066775656914,0.255679882248303,0.0890320356467374,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,1.7887322147588,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0,0,0.79312517629427,0,0,0,0.185803175125719,0.28853842595289,0.284567373393656,0.159426272728822,0,0,0.211673582723883,0,0,0.684704037099577,0,0,0.50787533340481,0,0.201799707191048,0,0.343505344755765,0.307240764308458,0.223676107892416,0,0,0,1.23087398947712,0,0.33307196799782,0,0.18714054040822,0.293016358543788,0.121360521749513,0,0,0,0.296964680832639,0,0,0.422008249231538,0.111308705022906,0,2.74463030566391,0.796991953004279,0.828851746593443,1.0077309914171,0.102268682502155,0.492339221844278,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,1.02044907978036,1.99613798001194,0,0.262379999988587,0.724999575434793,0.1137934482855,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,1.32656082487949,0,0.995213339381022,0.886642856860642,0,0,0,0.384751292518985,0,0.69169171316418,0.359030577639089,0.325942115766024,0,0,0,0,0.470940769185074,0.166211681900156,0.676786981851542,0,0,0.569261198172555,0.635746315921515,0.421996129056054,0,0.282706142867882,0.432777279484182,0,0.265372693510018,0,0,0.247127877893006,0,0.404406797884062,0.802577647298789,0,0.364909578431332,0,0.242780379534093,0,1.20990716048664,0.61214552326098,0.442306057399416,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0.195984794828755,0,0.34945333648406,0,0.19351266257817,0.219267951258557,0,0.387956065953678,0.0882561266915003,0,0.274083849293502,0.397429223405979,0.189932387867636,0,0.0801588202515337,0.213452994739353,0,0,0.458146384663663,1.02956998717179,0,0.124252535565433,0,0,0.209205692624666,0.101998217636322,0,0,0.547621515567972,0,0.859530882839914,0,0,0.458320848023367,2.15361907373044,0,0,0.223171457441873,0.335917362433631,0,1.16495949527454,0.0787831823072236,0.329663433524666,0.26961417541674,0.0984274815147488,0,0,0.681017030557878,0.160753148465019,0,0,0,0,0.546746009922222,0.670869375198532,0.236417121897595,0.314727528809989,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0,0.226624183040251,0,0,0.646414781807753,0.52893040697076,0.342173675768659,0,0.213574825135389,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0.157054096250234,0,0.244052529803926,0.751145584238999,0.573409195690071,0.665574309221114,0.372578417648301,0.415045904808692,0,0,0.285465333544967,0.235265819698172,0.936669811613763,0,0,0,0,0,0,0,0,0.756154618816195,0,0,0.318593534327405,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0.337884881306145,0.256241518587947,0,0,0.829550616910385,0,0.132864840313363,0.163565394255844,0.327609848846413,0,0,0,0.320075189082423,0,0,0.184105950251841,0,0,0.639471856518258,0.107824811396682,0,0.436838552768056,0.33946505990805,0.425149840203366,1.11542187833102,0,0,0.552032215008773,0,0,0.3062454773532,0.256916900385838,4.25089728976755,1.43670473151436,0.41023272848151,0.252071696221718,0.345786262321089,1.13032951942296,4.28308260777463,0.0981477185010256,0,0,0,0,0.690359926060101,0.198916222116275,0.150420656698515,0.20170506870352,0.781514011233092,1.04762677792569,0,0.147856086217045,0.405225507710368,0,1.2401207790071,0.317079050969534,1.64092442705466,0.548257766857182,0.992422356778588,0.703484977438482,0.127762427639595,0.535701835878287,0.336283722218824,0,0.682986574053893,0.266107110487916,0,0.171488009437418,0.203909198930495,0.328863867814245,0,0,0.156986185701028,1.25692471932802,0,1.82631744101899,0,0.9555033757741,0.500335809236594,0.632054446930906,0.581207126840626,0.173858272302579,0,0.414432328326074,0,0,0.430227358820278,0.118332000730565,0.170426809518315,0.846774100381858,0,0,0,0.223710863595585,0.196300467230486,0,0,0,1.1598144313382,1.94284397223656,0.233939463462106,0.198950775161368,0.118920090777569,0.11294608203896,0.439762066981716,0.150962843566674,0.385870790539723,0,0.470317296361523,0.245148321753905,0.235676547101626,0.392616934229891,1.18818560130834,0.4226557275834,0,0.375935671919414,0.128915775947154,0.199882311849858,0.178553938605658,0,0.0802413666891683,0.730336388246517,0,0.716697915757256,0.315543124386369,0.271965960763659,1.74540276136151,0.5290268405154,0,0,0,0,0.655593431782173,1.0135880080915,0.61193297845189,0.534434810531121,0.551369397209069,0,0.530450887527676,1.07185652062471,0.829169439458779,0.413731983447581,0,0.476128862927481,0.193766729508018,0.434523000071005,0.112131862580613,0.0636471582781649,1.61693751166575,0,0,0.202056159043763,0.215166616178029,0.332660356546013,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:21854898..21854902,+ | |||
}} |
Revision as of 02:06, 11 January 2014
Short description: | p@chr10:21854898..21854902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:21854898..21854902, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 3.52e-09 | 3 |
dorsal striatum | 3.52e-09 | 3 |
regional part of telencephalon | 2.32e-08 | 32 |
cerebral hemisphere | 2.32e-08 | 32 |
cranial nerve II | 6.59e-08 | 1 |
cranial nerve | 6.59e-08 | 1 |
nerve trunk | 6.59e-08 | 1 |
nerve connecting eye with brain | 6.59e-08 | 1 |
nerve | 6.59e-08 | 1 |
retinal neural layer | 6.59e-08 | 1 |
presumptive neural retina | 6.59e-08 | 1 |
brain grey matter | 7.84e-08 | 34 |
gray matter | 7.84e-08 | 34 |
telencephalon | 7.84e-08 | 34 |
tricuspid valve | 8.54e-08 | 1 |
right atrium valve | 8.54e-08 | 1 |
outflow tract of atrium | 8.54e-08 | 1 |
outflow part of right atrium | 8.54e-08 | 1 |
right cardiac atrium | 8.54e-08 | 1 |
surface | 9.71e-08 | 1 |
putamen | 1.83e-07 | 1 |
nervous system | 2.33e-07 | 89 |
olfactory region | 2.83e-07 | 1 |
primary subdivision of skull | 2.83e-07 | 1 |
cranium | 2.83e-07 | 1 |
neurocranium | 2.83e-07 | 1 |
chondrocranium | 2.83e-07 | 1 |
cartilaginous neurocranium | 2.83e-07 | 1 |
head paraxial mesoderm | 2.83e-07 | 1 |
neocortex | 3.18e-07 | 20 |
corpus striatum | 4.35e-07 | 4 |
striatum | 4.35e-07 | 4 |
ventral part of telencephalon | 4.35e-07 | 4 |
future corpus striatum | 4.35e-07 | 4 |
central nervous system | 6.21e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.62e-07 | 1 |
endocrine pancreas cancer | 3.62e-07 | 1 |
pancreatic endocrine carcinoma | 3.62e-07 | 1 |