FFCP PHASE1:Hg19::chr10:120810195..120810209,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_BC014625_5end | |||
|description=CAGE_peak_4_at_BC014625_5end | |||
|id=chr10:120810195..120810209,- | |||
|ontology_enrichment_celltype=CL:0000037!8.60e-12!172;CL:0000566!8.60e-12!172;CL:0002087!2.32e-11!119;CL:0002032!5.84e-11!165;CL:0000837!5.84e-11!165;CL:0000988!2.63e-10!182;CL:0000738!1.30e-09!140;CL:0002031!1.69e-09!124;CL:0000542!6.91e-09!53;CL:0000051!6.91e-09!53;CL:0000838!1.91e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000624;9.59e-19;6!CL:0000791;8.30e-16;18!CL:0000789;8.30e-16;18!CL:0002419;8.30e-16;18!CL:0000084;5.02e-13;25!CL:0000623;6.03e-11;3!CL:0000542;7.74e-10;53!CL:0000898;1.69e-09;3!CL:0000815;7.06e-07;2!CL:0000792;7.06e-07;2!CL:0002677;7.06e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.75e-19,6;CL:0000542,1.07e-16,53;CL:0000051,1.07e-16,53;CL:0000791,5.62e-16,18;CL:0000789,5.62e-16,18;CL:0002420,5.62e-16,18;CL:0002419,5.62e-16,18;CL:0000790,5.62e-16,18;CL:0000838,2.67e-15,52;CL:0002087,3.62e-15,115;CL:0000084,4.89e-13,25;CL:0000827,4.89e-13,25;CL:0000738,7.92e-13,136;CL:0000037,1.30e-12,168;CL:0002031,4.64e-12,120;CL:0000988,1.50e-11,177;CL:0002032,1.51e-11,161;CL:0000837,1.51e-11,161;CL:0000623,7.30e-11,3;CL:0000825,7.30e-11,3;CL:0000898,1.04e-09,3;CL:0000815,8.27e-07,2;CL:0000792,8.27e-07,2;CL:0002677,8.27e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;8.30e-16;18!CL:0000051;7.74e-10;53 | |||
|ontology_enrichment_disease=DOID:14566!1.27e-17!239;DOID:162!1.40e-17!235;DOID:0050687!2.51e-09!143;DOID:0050686!2.16e-08!137;DOID:2531!3.94e-08!51;DOID:0060083!3.94e-08!51;DOID:305!1.55e-07!106;DOID:1240!6.82e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.376627918784408,0.916960868975415,1.06730766284929,0.944529375764151,0,0.383829398097213,0,0,0,0,0.309868802321207,0.995184627411951,0,2.21598163412751,3.00816671205213,4.55722828503289,0.223915474239924,0,0.257575567634187,0.872389432677388,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0.768482119587302,0.236482229888585,0,0,0,0.188242339542605,0.818718450173537,0.224723484445085,0,0,0,0.329851300186716,0.598390972864896,0,1.45104619314292,0,0,1.7587406567972,1.0429658368404,0.65156653411535,0.605399502633369,0.368277635987565,0,0.211255286311942,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0.570025487482497,0.79566670879636,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,2.34894875748376,2.29363936875137,0,0.560508562981536,0,2.9506465517075,4.71612915298998,5.55124047298675,0,1.30368906653436,2.36723902867367,0,0.445641827540694,1.17842362989935,1.10766947291811,2.97884250141517,1.15282187753108,0.650296737799391,0.328875809207352,0.552700035571697,0.869409257205157,0.593146252648242,0,0,0.566546713487831,1.91610246800961,0.34362744548263,1.51811815211702,0.318565414324097,0,0,0,0.127986611154418,1.24930726552346,0,0,1.41124720257313,6.68600489458768,4.05508330871837,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0,0.702678285545008,0.0654895377488563,0,0,0.649094787309367,0.174129737299267,0.398873881556595,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0,0,1.72101972449288,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0,0.150238058906597,0,1.25572744982203,0.427114777637135,0.423863802319124,0.300091096084402,0.103052529238439,0.515281080091258,0,0.843881661206331,0.194874010322397,0.757301322732344,0,0,0,0.201504196455281,0.169560592310488,0,0,0,0.365921118388786,0,0.232387885739037,0.310983165046111,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0.882926198829301,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0.16798212819886,0.141775097242386,0.358234090811393,0,0,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,4.21667878966063,0.239624855491583,0,0,0,0.205476322550383,0,0.560425719967636,2.1673383622212,4.09692392233083,4.36366323351144,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.415941723061614,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0.173767228936166,0,0,1.24060815673732,0.215714200818617,1.28073069364133,0,1.66435439510497,0,0,0.306923946576125,0,0,0.511707249066704,0.160853921143607,0,0.462629081407967,0,0,0,0,0.362578348774867,0,1.10497186723076,0,0.364182336013434,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0.54941678891006,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.214840489736547,0,0,0,0,0,0.510450849978337,0.2023155617111,0,0.62962469366128,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.320472213382419,0,1.22520107990516,1.11481905075431,0.144269212976445,0.995985806877798,0.956557636372934,1.1974762285969,0.383010740264733,1.2700414963433,0.973865820823666,0.842391534340376,0.456469358066384,0.783399478865116,0,0.677167111206413,0.963528450622197,1.81619736471943,1.27753871307098,0,1.22896305723383,0.223676107892416,0.166849141711909,0.390776190804081,0,0,0,0.33307196799782,0,0.18714054040822,0.293016358543788,0.121360521749513,0.557216921387392,0.284136146806413,0,0,0.307160702099232,0.994147647766298,0.140669416410513,0,0,0.844501632511974,0.19924798825107,0.276283915531148,1.25966373927138,0,0.246169610922139,0,0.539210106883961,1.25314822272926,0,0,0,0,0,0.0927680981618513,0,0,0.349839999984783,0,1.365521379426,0.508507300585533,0.709163045303809,0,0,1.56262495439963,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0.10893846351899,0,0.0769502585037971,0,0.69169171316418,0.359030577639089,0.108647371922008,0.957003479195758,0.0915975934018623,0.533034776018635,1.02193298195737,0.470940769185074,0.332423363800313,0.451191321234361,0.588187602953219,0.167821586975843,0.189753732724185,0.158936578980379,0.210998064528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| |||
|short_description=p4@BC014625 | |||
}} |
Revision as of 05:15, 11 January 2014
Short description: | p4@BC014625 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_4_at_BC014625_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_BC014625_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.75e-19 | 6 |
lymphocyte | 1.07e-16 | 53 |
common lymphoid progenitor | 1.07e-16 | 53 |
mature alpha-beta T cell | 5.62e-16 | 18 |
alpha-beta T cell | 5.62e-16 | 18 |
immature T cell | 5.62e-16 | 18 |
mature T cell | 5.62e-16 | 18 |
immature alpha-beta T cell | 5.62e-16 | 18 |
lymphoid lineage restricted progenitor cell | 2.67e-15 | 52 |
nongranular leukocyte | 3.62e-15 | 115 |
T cell | 4.89e-13 | 25 |
pro-T cell | 4.89e-13 | 25 |
leukocyte | 7.92e-13 | 136 |
hematopoietic stem cell | 1.30e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 4.64e-12 | 120 |
hematopoietic cell | 1.50e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.51e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-11 | 161 |
natural killer cell | 7.30e-11 | 3 |
pro-NK cell | 7.30e-11 | 3 |
naive T cell | 1.04e-09 | 3 |
regulatory T cell | 8.27e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.27e-07 | 2 |
naive regulatory T cell | 8.27e-07 | 2 |