FFCP PHASE1:Hg19::chr11:6637561..6637581,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2073 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-226bp_to_ENST00000524924_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_7_at_TPP1_5end | |||
|id=chr11:6637561..6637581,- | |||
|ontology_enrichment_celltype=CL:0002194!1.12e-19!63;CL:0000576!1.12e-19!63;CL:0000040!1.12e-19!63;CL:0000559!1.12e-19!63;CL:0002009!2.03e-19!65;CL:0000839!1.54e-18!70;CL:0000557!5.26e-18!71;CL:0000766!1.13e-17!76;CL:0000860!3.26e-16!45;CL:0002057!7.45e-16!42;CL:0000763!8.75e-13!112;CL:0000049!8.75e-13!112;CL:0002031!7.04e-08!124;CL:0002087!1.61e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.16e-30;39!CL:0000234;2.16e-30;39!CL:0000860;2.70e-29;33!CL:0002057;2.70e-29;33!CL:0002262;6.51e-19;2!CL:1000398;6.51e-19;2!CL:0000766;1.24e-14;69!CL:0000576;1.83e-14;48!CL:0000763;1.16e-08;100!CL:0000738;7.68e-08;136!CL:0000235;4.52e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.99e-30,48;CL:0000234,9.99e-30,48;CL:0000766,1.36e-25,72;CL:0000860,2.48e-24,42;CL:0002057,2.48e-24,42;CL:0000839,2.90e-24,66;CL:0000557,7.13e-24,67;CL:0002194,2.27e-23,59;CL:0000576,2.27e-23,59;CL:0000040,2.27e-23,59;CL:0000559,2.27e-23,59;CL:0002009,1.50e-22,61;CL:0002262,4.96e-19,2;CL:1000398,4.96e-19,2;CL:0002031,1.50e-16,120;CL:0000738,2.06e-16,136;CL:0000763,2.50e-16,108;CL:0000049,2.50e-16,108;CL:0002087,4.80e-15,115;CL:0000988,1.22e-13,177;CL:0002032,1.89e-13,161;CL:0000837,1.89e-13,161;CL:0000037,8.94e-13,168;CL:0000134,4.11e-07,354;CL:0000235,5.10e-07,6;CL:0002320,6.55e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-18;42!CL:0000049;1.04e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.12e-14!86;UBERON:0002371!8.51e-14!80;UBERON:0004765!1.63e-13!101;UBERON:0001434!1.63e-13!101;UBERON:0002405!5.05e-12!115;UBERON:0002390!6.52e-11!102;UBERON:0003061!6.52e-11!102;UBERON:0002193!1.53e-09!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;6.51e-19;2!UBERON:0003497;6.51e-19;2!UBERON:0003909;6.51e-19;2!UBERON:0003835;6.51e-19;2!UBERON:0001280;6.16e-13;3!UBERON:0004647;6.16e-13;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.11e-21,76;UBERON:0001474,3.79e-19,82;UBERON:0001281,4.96e-19,2;UBERON:0003497,4.96e-19,2;UBERON:0003909,4.96e-19,2;UBERON:0003835,4.96e-19,2;UBERON:0002390,3.23e-18,98;UBERON:0003061,3.23e-18,98;UBERON:0004765,2.91e-17,90;UBERON:0002405,1.23e-16,93;UBERON:0002193,2.56e-16,108;UBERON:0001434,2.53e-15,100;UBERON:0001280,5.15e-13,3;UBERON:0004647,5.15e-13,3;UBERON:0005171,5.15e-13,3;UBERON:0003081,1.53e-11,203;UBERON:0002204,2.82e-08,167;UBERON:0002394,6.11e-07,6;UBERON:0003928,6.11e-07,6 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0.671746422719773,0.647787332037959,0.77272670290256,0.726991193897824,0.377875943688809,0.970336244751265,0.929716147622738,2.05583944010913,0.619412741790207,0.863077176966451,0.512321413058201,0.47296445977717,0.689491361473237,1.93645405075148,2.70852973188684,1.31769637679823,1.36453075028923,0.674170453335254,1.22433556948361,0.962787081228281,1.27867425159808,0.329851300186716,0.797854630486527,0,1.7412554317715,0,0,2.00998932205395,0.521482918420201,1.08594422352558,1.81619850790011,0.736555271975129,0.316462387440884,0,0.425208599930087,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,1.70763890732835,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0.334231370655521,0,0,0.541607727530031,0.384273959177026,0.260118695119756,0.328875809207352,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0.163461903113459,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0,0,0,0.368502951935304,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0.89694817844431,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.757301322732344,0,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0.234004265139238,0.445893486866185,0,0.16798212819886,0,0,0,0,11.3312544716067,0.088048434013226,0,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,4.21667878966063,0.239624855491583,1.14861935834114,0,0,0.410952645100767,0,0.224170287987055,0,0,0.256686072559497,0,0,0,0,0.637938751653163,0.749007023947182,2.99161459204025,0,0,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0.213455115606889,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0,0.241718899183244,0,0.184161977871793,0,0.546273504020151,0.786746489756545,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0.206082023295445,0.27470839445503,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0.48763373908959,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0.648473311192717,0,2.37937552888281,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.169291777801603,0.321176150207399,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,1.9882952955326,0,0.222617410045812,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0,0,0.331737779793674,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0.31900115973192,0,0.533034776018635,1.02193298195737,0.156980256395025,0.332423363800313,0,0.19606253431774,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0.242780379534093,0.789168805698781,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0.0882561266915003,0.225980740780532,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0.471388069233591,0,0.209205692624666,0,0,0.600420288709789,0.547621515567972,0,0,0.262887354279314,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0,0.360299883542404,0,0.157566364614447,0.164831716762333,0.13480708770837,0.0984274815147488,0.0846733320657845,0.795229689809303,0.544813624446302,0.160753148465019,0.137539436597234,0.415440338029185,0.2249738915515,0,0.182248669974074,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.1572043050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| |||
|short_description=p7@TPP1 | |||
}} |
Revision as of 06:24, 11 January 2014
Short description: | p7@TPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TPP1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -226bp_to_ENST00000524924_5end |
EntrezGene: | TPP1 |
HGNC: | 2073 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.99e-30 | 48 |
phagocyte | 9.99e-30 | 48 |
myeloid leukocyte | 1.36e-25 | 72 |
classical monocyte | 2.48e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.48e-24 | 42 |
myeloid lineage restricted progenitor cell | 2.90e-24 | 66 |
granulocyte monocyte progenitor cell | 7.13e-24 | 67 |
monopoietic cell | 2.27e-23 | 59 |
monocyte | 2.27e-23 | 59 |
monoblast | 2.27e-23 | 59 |
promonocyte | 2.27e-23 | 59 |
macrophage dendritic cell progenitor | 1.50e-22 | 61 |
endothelial cell of sinusoid | 4.96e-19 | 2 |
endothelial cell of hepatic sinusoid | 4.96e-19 | 2 |
hematopoietic lineage restricted progenitor cell | 1.50e-16 | 120 |
leukocyte | 2.06e-16 | 136 |
myeloid cell | 2.50e-16 | 108 |
common myeloid progenitor | 2.50e-16 | 108 |
nongranular leukocyte | 4.80e-15 | 115 |
hematopoietic cell | 1.22e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.89e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.89e-13 | 161 |
hematopoietic stem cell | 8.94e-13 | 168 |
mesenchymal cell | 4.11e-07 | 354 |
macrophage | 5.10e-07 | 6 |
connective tissue cell | 6.55e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.11e-21 | 76 |
bone element | 3.79e-19 | 82 |
hepatic sinusoid | 4.96e-19 | 2 |
abdomen blood vessel | 4.96e-19 | 2 |
sinusoid | 4.96e-19 | 2 |
abdominal segment blood vessel | 4.96e-19 | 2 |
hematopoietic system | 3.23e-18 | 98 |
blood island | 3.23e-18 | 98 |
skeletal element | 2.91e-17 | 90 |
immune system | 1.23e-16 | 93 |
hemolymphoid system | 2.56e-16 | 108 |
skeletal system | 2.53e-15 | 100 |
liver parenchyma | 5.15e-13 | 3 |
liver lobule | 5.15e-13 | 3 |
hepatic duct | 5.15e-13 | 3 |
lateral plate mesoderm | 1.53e-11 | 203 |
musculoskeletal system | 2.82e-08 | 167 |
bile duct | 6.11e-07 | 6 |
digestive system duct | 6.11e-07 | 6 |