FFCP PHASE1:Hg19::chr11:35250796..35250807,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:35250796..35250807,+ | |||
|id=chr11:35250796..35250807,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.07e-13!76;CL:0002057!2.26e-13!42;CL:0000860!6.70e-13!45;CL:0000839!8.53e-12!70;CL:0000557!9.56e-12!71;CL:0002194!3.51e-11!63;CL:0000576!3.51e-11!63;CL:0000040!3.51e-11!63;CL:0000559!3.51e-11!63;CL:0002009!1.23e-10!65;CL:0002371!1.65e-10!591;CL:0000548!1.86e-09!679;CL:0000004!1.86e-09!679;CL:0000255!1.86e-09!679;CL:0000144!1.86e-09!625;CL:0000012!6.30e-09!682;CL:0000063!3.94e-08!578;CL:0000003!4.77e-08!722;CL:0000219!7.31e-08!390;CL:0002320!2.07e-07!365;CL:0000134!3.31e-07!358;CL:0000738!3.75e-07!140;CL:0002087!6.65e-07!119;CL:0002031!8.44e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.83e-22;33!CL:0002057;3.83e-22;33!CL:0000473;2.98e-17;39!CL:0000234;2.98e-17;39!CL:0000576;3.51e-10;48!CL:0000766;7.89e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.74e-19,42;CL:0002057,5.74e-19,42;CL:0000473,1.91e-17,48;CL:0000234,1.91e-17,48;CL:0000766,1.63e-15,72;CL:0002194,1.30e-13,59;CL:0000576,1.30e-13,59;CL:0000040,1.30e-13,59;CL:0000559,1.30e-13,59;CL:0000839,1.37e-13,66;CL:0000557,2.85e-13,67;CL:0002009,6.23e-13,61;CL:0000763,2.72e-08,108;CL:0000049,2.72e-08,108;CL:0000219,8.30e-08,386;CL:0000738,5.02e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;5.07e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.59e-07,3;DOID:127,6.59e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.33e-12!80;UBERON:0001474!5.04e-10!86;UBERON:0002390!1.71e-09!102;UBERON:0003061!1.71e-09!102;UBERON:0004765!8.98e-09!101;UBERON:0001434!8.98e-09!101;UBERON:0002204!9.78e-08!167;UBERON:0002193!2.56e-07!112;UBERON:0002384!5.08e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.21e-13,76;UBERON:0001474,2.16e-11,82;UBERON:0004765,1.94e-10,90;UBERON:0001434,1.74e-09,100;UBERON:0002405,4.07e-09,93;UBERON:0002390,4.80e-09,98;UBERON:0003061,4.80e-09,98;UBERON:0002204,1.21e-08,167;UBERON:0002193,1.69e-07,108 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,1.30592814099919,0.245733936501509,0,0,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0.730310090387373,2.92759679274304,0.369363174230364,0.408001382488506,0.626909442956176,0.286235987131057,1.77936752594749,0.87879847716362,0.0764134057479513,0.164201178899891,0,0,0.383829398097213,0.464448369948228,0.919421224478927,0,0.739508020333575,0,0,0.293600439334847,0,0.200544447470142,0.434021741431704,0.223915474239924,0.32389366601898,0,2.61716829803216,0.377875943688809,0.727752183563449,1.39457422143411,0.822335776043652,1.54853185447552,3.16461631554365,1.2808035326455,0.47296445977717,1.37898272294647,1.29096936716765,1.35426486594342,2.25890807451126,2.45615535052061,1.79778787556068,2.14258724659632,0.320929027076094,1.27867425159808,2.63881040149373,1.59570926097305,1.27867425159808,3.19230162491442,1.70215567407342,2.4912889959823,2.26123798731069,1.5644487552606,1.52032191293582,0.605399502633369,1.47311054395026,1.89877432464531,0.845021145247767,0.425208599930087,0,0.336985893439485,0.600707571366025,0.32145117339416,0,0.39783335439818,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0,0.983548850569165,0.786021525498329,1.02800749499755,0.501559486172034,0.32592226663359,0,0,0.111410456885174,0.589211814949674,0.221533894583621,0.270803863765016,0.640456598628376,0.390178042679635,0.164437904603676,0.829050053357545,0.289803085735052,0.14828656316206,0,0,0,0.383220493601921,0.68725489096526,0.759059076058509,0.637130828648193,0,0,0,0.383959833463255,0,0.236777252044017,0,1.00803371612366,0.267440195783507,0.434473211648397,0,0,0,1.0843174571537,0.50133791063589,3.0417768981773,0,0,0.189069634328136,0.886917589850256,0.351339142772504,0.130979075497713,0,0.370784442784429,0.324547393654683,0.522389211897802,1.19662164466979,0,0,0,0,0,0,0,0,0,0.626984899610432,0,0,0,0,0,0,0.367663080345869,1.62028389576352,0,0,0,0,0,0,1.31780417436063,0,1.3082821564276,0,1.13967460498122,0.132409180813219,1.14734648299525,0.709336764396714,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0.70296429550139,0.312160076830321,0,0.448346041655403,0,0.323745888736263,0,0.408308342509787,0.491337269247072,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0.340296549480063,1.4351170855109,0.213557388818567,0.423863802319124,0.600182192168805,0.515262646192195,1.03056216018252,0.930584281657949,1.68776332241266,0.487185025805993,0.504867548488229,0.828449087780694,1.45481451136931,2.4850671476163,0.906768884048762,0.339121184620975,0.193260853163297,0.818238361772504,0.573609190778008,0,0,0,0,0,0,0,0,0,0.928735856063958,2.16563844500876,0.236613600079688,0.505754070234305,0.482022059766964,0.110293972732394,0.217879444092406,0,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0.686271241194102,0.878002283269004,0,1.00528972411631,0.833296006426766,0.651616610620649,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0.246217006087397,0.702012795417713,0.594524649154913,0,0.839910640994298,0.425325291727159,0.895585227028483,0.290633938513962,0.383382679165211,0.492663237895943,0.792435906119034,1.4512968087854,1.15295962733569,0.75745460055828,0.825472625798197,0,1.17217447210047,1.71072446022705,1.54241239054985,1.20137223137567,1.14330573052231,0.224262168690721,0,0.2933531432838,0.129271715757778,0,0,1.32969058292435,2.08014873822732,0,1.41849132023278,0.266422179016099,0.285955987316295,0,0,1.30294473717494,0.355391948742546,0,0.301439377059586,0,0.699810938274399,0,0.502257091432126,10.5416969741516,0.479249710983165,0,0,0.723906533337896,0.821905290201534,0,0.448340575974109,0.788123040807709,1.07813787429759,0.128343036279748,1.01637849688985,0,0,0,0.637938751653163,2.99602809578873,11.966458368161,0.414415513436035,0.49076596687656,1.00034104211935,0.271265023699736,0.623912584592421,1.24900292158013,1.26161932027148,0.35142424497814,0,0,0,0.664225598535437,0.368738337083406,1.56390506042549,0,0,0.206768026122887,1.50999940573032,0.426910231213777,0,0,0.30239029332968,0.248107807818777,0.767309866440312,0.841980283299221,0,0.511707249066704,0.804269605718038,0,1.07946785661859,1.24293207719189,0.98552587216571,1.03850885836724,0.929683027679674,0.120859449591622,2.6065841139427,0.368323955743585,2.64073230778596,0.728364672026868,1.04899531967539,0,0.462092022626489,0.784349769176855,1.46139224653261,0.422206515571503,0,0,0,0,0.270946437543853,0,0.254876273045038,0,1.11937377361089,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.773365746336976,0,0.307007349452259,0.275673144969061,0,0.290033387828457,0.170453254832202,0,1.81813406897076,0.384380134730212,0.255225424989168,0.4046311234222,0,1.5740617341532,0,0,0.532306030317022,0,0.37064843820784,0.572499546967965,0,0,0,0,0.42793898803392,0.318203247925937,1.56989728039846,0.359744915166629,0.274537029736055,0.235624804691373,0.606547444719948,1.58510321173008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| |||
|short_description=p@chr11:35250796..35250807,+ | |||
}} |
Revision as of 07:17, 11 January 2014
Short description: | p@chr11:35250796..35250807, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:35250796..35250807, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.74e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.74e-19 | 42 |
defensive cell | 1.91e-17 | 48 |
phagocyte | 1.91e-17 | 48 |
myeloid leukocyte | 1.63e-15 | 72 |
monopoietic cell | 1.30e-13 | 59 |
monocyte | 1.30e-13 | 59 |
monoblast | 1.30e-13 | 59 |
promonocyte | 1.30e-13 | 59 |
myeloid lineage restricted progenitor cell | 1.37e-13 | 66 |
granulocyte monocyte progenitor cell | 2.85e-13 | 67 |
macrophage dendritic cell progenitor | 6.23e-13 | 61 |
myeloid cell | 2.72e-08 | 108 |
common myeloid progenitor | 2.72e-08 | 108 |
motile cell | 8.30e-08 | 386 |
leukocyte | 5.02e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.21e-13 | 76 |
bone element | 2.16e-11 | 82 |
skeletal element | 1.94e-10 | 90 |
skeletal system | 1.74e-09 | 100 |
immune system | 4.07e-09 | 93 |
hematopoietic system | 4.80e-09 | 98 |
blood island | 4.80e-09 | 98 |
musculoskeletal system | 1.21e-08 | 167 |
hemolymphoid system | 1.69e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.59e-07 | 3 |
leiomyoma | 6.59e-07 | 3 |