FFCP PHASE1:Hg19::chr11:57194919..57194936,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17466 | |||
|TSSclassifier=strong | |||
|UniProt=E9PLW1 | |||
|association_with_transcript=0bp_to_ENST00000532795_5end | |||
|description=CAGE_peak_3_at_SLC43A3_5end | |||
|id=chr11:57194919..57194936,- | |||
|ontology_enrichment_celltype=CL:0000055!5.74e-23!180;CL:0000680!3.37e-13!57;CL:0000056!3.37e-13!57;CL:0000355!3.37e-13!57;CL:0000187!4.67e-12!54;CL:0000183!4.29e-10!59;CL:0000393!1.67e-09!60;CL:0000211!1.67e-09!60;CL:0000192!3.75e-09!42;CL:0000514!3.75e-09!42;CL:0000057!8.66e-09!75;CL:0000359!1.93e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000723;5.16e-12;61!CL:0000134;8.63e-12;55!CL:0000048;5.95e-11;58!CL:0000034;2.31e-08;69!CL:0002540;1.87e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.03e-09,58;CL:0000056,3.03e-09,58;CL:0000355,3.03e-09,58;CL:0000187,2.00e-08,55;CL:0002540,1.15e-07,6;CL:0000048,4.83e-07,427;CL:0000359,6.29e-07,32;CL:0000393,7.02e-07,61;CL:0000211,7.02e-07,61;CL:0000192,7.11e-07,43;CL:0000514,7.11e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.92e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.33e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!1.03e-14!70;UBERON:0000914!1.73e-13!83;UBERON:0002329!1.73e-13!83;UBERON:0003077!1.73e-13!83;UBERON:0003059!1.73e-13!83;UBERON:0007282!1.73e-13!83;UBERON:0009618!1.73e-13!83;UBERON:0007285!1.73e-13!83;UBERON:0001134!9.92e-13!61;UBERON:0002036!9.92e-13!61;UBERON:0003082!9.92e-13!61;UBERON:0002385!1.38e-12!63;UBERON:0001015!1.38e-12!63;UBERON:0000383!1.38e-12!63;UBERON:0000486!1.39e-12!82;UBERON:0005256!1.96e-12!143;UBERON:0003104!8.76e-10!238;UBERON:0009142!8.76e-10!238;UBERON:0002100!2.25e-08!216;UBERON:0000926!2.00e-07!448;UBERON:0004120!2.00e-07!448;UBERON:0006603!2.00e-07!448;UBERON:0000490!6.89e-07!138;UBERON:0000475!9.82e-07!365 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,6.52e-09,71;UBERON:0003059,6.52e-09,71;UBERON:0007282,6.52e-09,71;UBERON:0004290,6.52e-09,71;UBERON:0009618,6.52e-09,71;UBERON:0001134,6.64e-09,62;UBERON:0002036,6.64e-09,62;UBERON:0003082,6.64e-09,62;UBERON:0003077,1.16e-08,72;UBERON:0007285,1.16e-08,72;UBERON:0007524,2.02e-08,73;UBERON:0002385,2.29e-08,64;UBERON:0001015,2.29e-08,64;UBERON:0000383,2.29e-08,64;UBERON:0000486,8.44e-08,83;UBERON:0007503,2.55e-07,78;UBERON:0003104,3.05e-07,160;UBERON:0009142,3.05e-07,160;UBERON:0005256,4.35e-07,122 | |||
|phase1_expression=2.90685406832891,2.14100523890983,2.39622486963151,1.0007329835313,0.446961094427288,0.872338524100369,0,1.89515962028049,1.56711376919903,0.737201809504527,0.697801167972428,0,0,0.37129905888014,0,0.672325146451775,3.01347264011988,0.730310090387373,6.8310591830671,0.984968464614303,0.612002073732759,0.313454721478088,0,0.136874425072884,0.125542639594803,0.152826811495903,0.0821005894499457,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0.580418477257168,0,0,0,1.0429658368404,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,2.53007406669196,0,2.17269778441236,0.795285947051099,1.94653948121054,0.283604451492204,0.221729397462564,0.087834785693126,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0.805658634218294,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.633152558322899,10.4603252842443,0.860509862246441,0.354668382198357,0,0,0.49333509683432,0.933633106199299,0.134710672069688,0.326923806226917,0,0,1.17160715916898,0.936480230490962,0.570471821544449,0.896692083310806,0.939475989150119,1.13311061057692,0.842704840213491,0.204154171254893,0.368502951935304,0.516628905878827,1.18800285728205,0.247266929278557,5.46096817162816,2.15585442544872,0,0.250237039743928,0.554128230968366,0,0.612975591598039,1.65261864797256,0.340296549480063,1.61450672119976,1.06778694409284,0,0.900273288253207,1.13357782162283,0.772921620136887,1.11670113798954,1.5189869901714,0.487185025805993,0.757301322732344,1.01254888506529,0,2.13005755509969,0.604512589365842,0.508681776931463,0.193260853163297,0,0,0,0,0,0,0,0,7.8224766164908,0,2.76269842704961,4.17931135228781,3.60939740834793,2.01121560067735,0.842923450390509,1.20505514941741,1.32352767278873,1.74303555273925,1.42362371466658,1.07865046528132,2.15843611637881,1.53898862778556,0,0,1.2347220339942,0,36.7589600983309,16.7080626835196,20.6776467338491,0,0,0.343135620597051,0.98775256867763,0,0.402115889646523,0,2.93227474779292,1.03993478527958,1.44331342025273,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0.468008530278475,0,0,0.671928512795438,1.27597587518148,0.53735113621709,0,1.15014803749563,0.492663237895943,0,0.207328115540772,0.288239906833923,0.12624243342638,3.6828778689458,16.8074907245642,8.20522130470329,5.13217338068116,5.2442021278695,9.31063479316144,2.5724378936752,0.224262168690721,0,0.07333828582095,6.85140093516222,7.15312891703765,1.690605505112,0,0,2.31486636835928,1.41849132023278,1.8649552531127,0.428933980974443,1.08524321078289,1.64648067356154,1.62868092146868,0,2.37585561880029,1.80863626235752,2.61460037580088,0.599837947092342,0,0,0,0,0,1.42636905040718,1.59259437334337,0.821905290201534,2.86497541183833,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.613457458595699,1.00034104211935,0.813795071099207,0.207970861530807,0.356857977594324,0.315404830067869,0.35142424497814,3.61135319673263,2.27407504055985,2.0694614258501,0,0.184369168541703,0.173767228936166,0.391602314925481,0,0,0,0.106727557803444,0,1.66435439510497,0.604780586659361,0.992431231275107,1.38115775959256,0.280660094433074,1.02511319404561,1.02341449813341,0.160853921143607,0,0.925258162815933,0.887808626565635,3.44934055257998,1.55776328755086,1.39452454151951,0,0.200506470303285,0.460404944679482,0.229628896329213,0,0.131124414959424,0.902399225814824,0,0,1.46139224653261,0,0,0,0.215915916102139,0,0,0,1.52925763827023,2.49322802678617,0.447749509444357,0,0,0.256450125116389,0.656029291399411,0.650756789328606,4.84292754744295,0.0915694648183434,0.165018999841176,1.14853107599234,0,0,2.41676795730305,0.924291702687866,0.921022048356777,2.20538515975249,3.97454906012612,2.0302337147992,1.70453254832202,0.445160178233687,0.330569830721956,0.192190067365106,0,0.10115778085555,0.464845549297286,1.88887408098384,0,1.23213432070436,2.66153015158511,0,0.18532421910392,1.43124886741991,0.372158369359667,0.949138274156178,0.38126038784765,3.83846686967001,0.855877976067841,12.4099266691115,1.56989728039846,0.899362287916574,0.274537029736055,1.06031162111118,1.61745985258653,0,1.68503382495592,0.975267478179181,8.77368562672624,0,0,0.141405431953713,1.13008116620243,1.65409603063837,0.66343897524122,2.63070531152258,4.6302042741335,0.655894752046633,1.21746226177622,0.6196469961995,0,2.00775893085672,1.27723753317057,1.78335525740625,1.41904425628239,5.69990615303693,7.90307743103764,0.379473173765715,0,0.192444225451024,0,0,6.11934705049064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,2.4906390476222,0,0,0,0.23874448473769,0,0,0,0,1.00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| |||
|short_description=p3@SLC43A3 | |||
}} |
Revision as of 07:44, 11 January 2014
Short description: | p3@SLC43A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC43A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000532795_5end |
EntrezGene: | SLC43A3 |
HGNC: | 17466 |
UniProt: | E9PLW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.03e-09 | 58 |
myoblast | 3.03e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.03e-09 | 58 |
muscle cell | 2.00e-08 | 55 |
mesenchymal stem cell of the bone marrow | 1.15e-07 | 6 |
multi fate stem cell | 4.83e-07 | 427 |
vascular associated smooth muscle cell | 6.29e-07 | 32 |
electrically responsive cell | 7.02e-07 | 61 |
electrically active cell | 7.02e-07 | 61 |
smooth muscle cell | 7.11e-07 | 43 |
smooth muscle myoblast | 7.11e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
somite | 6.52e-09 | 71 |
presomitic mesoderm | 6.52e-09 | 71 |
presumptive segmental plate | 6.52e-09 | 71 |
dermomyotome | 6.52e-09 | 71 |
trunk paraxial mesoderm | 6.52e-09 | 71 |
skeletal muscle tissue | 6.64e-09 | 62 |
striated muscle tissue | 6.64e-09 | 62 |
myotome | 6.64e-09 | 62 |
paraxial mesoderm | 1.16e-08 | 72 |
presumptive paraxial mesoderm | 1.16e-08 | 72 |
dense mesenchyme tissue | 2.02e-08 | 73 |
muscle tissue | 2.29e-08 | 64 |
musculature | 2.29e-08 | 64 |
musculature of body | 2.29e-08 | 64 |
multilaminar epithelium | 8.44e-08 | 83 |
epithelial vesicle | 2.55e-07 | 78 |
mesenchyme | 3.05e-07 | 160 |
entire embryonic mesenchyme | 3.05e-07 | 160 |
trunk mesenchyme | 4.35e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.33e-09 | 14 |