FFCP PHASE1:Hg19::chr12:47610261..47610303,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91523 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28255 | |||
|TSSclassifier=weak | |||
|UniProt=F8VRF7 | |||
|association_with_transcript=-66bp_to_ENST00000548348_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_FAM113B_5end | |||
|id=chr12:47610261..47610303,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.98e-53!140;CL:0002087!1.45e-50!119;CL:0000037!1.72e-45!172;CL:0000566!1.72e-45!172;CL:0002031!7.88e-44!124;CL:0002032!1.37e-41!165;CL:0000837!1.37e-41!165;CL:0000988!1.71e-40!182;CL:0000542!6.16e-38!53;CL:0000051!6.16e-38!53;CL:0000838!2.71e-37!52;CL:0000084!6.75e-18!25;CL:0000827!6.75e-18!25;CL:0000791!6.87e-18!18;CL:0000789!6.87e-18!18;CL:0002420!6.87e-18!18;CL:0002419!6.87e-18!18;CL:0000790!6.87e-18!18;CL:0000945!7.88e-18!24;CL:0000826!7.88e-18!24;CL:0000766!9.21e-15!76;CL:0002194!2.85e-13!63;CL:0000576!2.85e-13!63;CL:0000040!2.85e-13!63;CL:0000559!2.85e-13!63;CL:0002009!1.98e-12!65;CL:0000839!2.56e-12!70;CL:0000625!7.66e-12!11;CL:0000763!1.67e-11!112;CL:0000049!1.67e-11!112;CL:0000557!2.49e-11!71;CL:0000236!5.78e-11!14;CL:0002057!1.86e-09!42;CL:0000860!3.22e-08!45;CL:0000624!6.11e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.52e-31;53!CL:0000791;2.91e-30;18!CL:0000789;2.91e-30;18!CL:0002419;2.91e-30;18!CL:0000945;5.28e-26;24!CL:0000084;8.13e-25;25!CL:0000625;1.31e-19;11!CL:0000236;4.25e-15;13!CL:0002087;7.69e-13;104!CL:0000624;5.18e-11;6!CL:0000738;1.30e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.22e-55,53;CL:0000051,1.22e-55,53;CL:0000838,1.66e-54,52;CL:0000738,2.55e-52,136;CL:0002087,6.99e-51,115;CL:0002031,5.14e-41,120;CL:0000037,1.90e-40,168;CL:0000988,3.19e-37,177;CL:0002032,7.56e-36,161;CL:0000837,7.56e-36,161;CL:0000791,2.76e-30,18;CL:0000789,2.76e-30,18;CL:0002420,2.76e-30,18;CL:0002419,2.76e-30,18;CL:0000790,2.76e-30,18;CL:0000945,5.89e-26,24;CL:0000826,5.89e-26,24;CL:0000084,8.28e-25,25;CL:0000827,8.28e-25,25;CL:0000625,1.27e-19,11;CL:0000236,3.17e-16,14;CL:0000624,5.06e-11,6;CL:0000134,1.47e-08,354;CL:0002320,4.89e-08,361;CL:0000766,1.07e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000051;4.52e-31;53!CL:0000790;2.91e-30;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.44e-18!102;UBERON:0003061!7.44e-18!102;UBERON:0007023!4.48e-17!115;UBERON:0002193!4.37e-16!112;UBERON:0002371!2.86e-09!80;UBERON:0000178!1.12e-08!15;UBERON:0000179!1.12e-08!15;UBERON:0000463!1.12e-08!15;UBERON:0001474!4.02e-08!86;UBERON:0002405!3.60e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.86e-15;15!UBERON:0000179;2.86e-15;15!UBERON:0000463;2.86e-15;15!UBERON:0002390;2.11e-10;32!UBERON:0002193;4.35e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.87e-15,15;UBERON:0000179,2.87e-15,15;UBERON:0000463,2.87e-15,15;UBERON:0002390,1.51e-14,98;UBERON:0003061,1.51e-14,98;UBERON:0002193,4.39e-14,108;UBERON:0004177,1.04e-07,7;UBERON:0005057,1.04e-07,7;UBERON:0002384,2.46e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,8.48188803802259,7.55325422939501,8.65818594450472,3.14691421479123,16.1208347200829,2.47705797305722,0,0,0.369754010166788,3.25362242437267,1.13735385989937,0,2.76997704265939,4.8130667392834,6.07630438004385,0.671746422719773,3.56283032620878,1.80302897343931,0.436194716338694,0.755751887377619,0.242584061187816,0.697287110717054,0,0.309706370895104,1.43846196161075,0.512321413058201,0.47296445977717,0.689491361473237,1.93645405075148,0,0.564727018627814,0,0,0.612167784741805,0.962787081228281,0,1.64925650093358,0.398927315243264,2.98357325372886,1.45104619314292,1.70215567407342,0.622822248995575,0.502497330513487,1.0429658368404,0.65156653411535,0.605399502633369,1.10483290796269,0.632924774881769,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0,10.5597746676794,10.3766336139805,10.6741110463627,3.41384178053206,8.40831572775626,6.8970292794538,9.25462821898807,13.3567525634951,6.83055562931338,4.69789751496751,1.91136614062614,0,2.80254281490768,0.526768169550154,35.2110488503761,20.0435489002074,25.9057888739382,132.578890844808,55.732707594344,52.5527064365554,60.3962858064525,55.7052284425868,45.3693097511249,40.9837704979699,60.9308693471285,53.1578976861552,46.3011277313167,37.4918422496382,30.1221519386575,79.6958485771394,141.910240946092,165.072690931353,120.215852375723,44.5305716801435,46.7529002194344,48.4514698130508,57.6884897804466,87.2869235248025,82.0365151859087,47.5226022224187,76.6427356105863,72.3124353022464,101.1938885074,66.2976305723247,53.373319799868,23.5879889572937,16.848732334361,22.0133093901854,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0.741568885568859,1.29818957461873,1.56716763569341,1.72845348674525,10.9705687180457,20.0198218773045,14.8583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,1.47730203652438,0.234004265139238,1.18904929830983,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,5.71634234366989,24.0377527446351,15.0939302401662,13.6043618456533,0,0,0,0,0,1.49801404789436,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,45.0754296947894,24.3757046925037,20.5984186560648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.412164046590889,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,2.16876448669825,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,32.4766469908588,35.9379487356916,34.7484784176239,43.3581831333176,40.313502762447,42.1507652275266,45.3626407280016,34.8975077569479,0,0,0,1.85803175125719,0.28853842595289,0.995985806877798,0,0.399158742865633,0,0,0,0,0.228234679033192,0,0,0,0.802940375518498,0.80719882876419,0,1.03051603426729,0.921722292925374,2.01308497103174,1.66849141711908,0,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0.334330152832435,0,0,0,0,0,0.422008249231538,0,0,0,0.796991953004279,10.4987887901836,0,0.102268682502155,0.984678443688556,0,0,0.179021174675609,0,0.887790650732402,19.1586473877552,0,0,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0,1.06606955203727,3.06579894587209,0.156980256395025,0,0.451191321234361,0,0.503464760927528,0,0.317873157960757,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0.67401132980677,0,0,1.27718352450966,0,0,0,2.41981432097328,0,2.21153028699708,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.451961481561065,0,0.397429223405979,0.0633107959558787,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0.410716136675979,0,0,0.788662062837943,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,3.64095327882873,1.59045937961861,0,0,0,0,0,0,0.242998226632099,0,0.630445658393585,0.157363764404994,0,0,0,0,0,0,0,0,0,0,1.8881279772348,0,0.113312091520126,0.146552233678082,0,0,0.13223260174269,0.342173675768659,0,1.9221734262185,1.41483874589699,2.48543433208317,14.8849806543585,0,19.3650231425624,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.974301544196942,0.664324201566815,0,0.655219697692825,0,0,6.19960927150283,0.106691729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| |||
|short_description=p3@FAM113B | |||
}} |
Revision as of 13:10, 11 January 2014
Short description: | p3@FAM113B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM113B_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -66bp_to_ENST00000548348_5end |
EntrezGene: | FAM113B |
HGNC: | 28255 |
UniProt: | F8VRF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.22e-55 | 53 |
common lymphoid progenitor | 1.22e-55 | 53 |
lymphoid lineage restricted progenitor cell | 1.66e-54 | 52 |
leukocyte | 2.55e-52 | 136 |
nongranular leukocyte | 6.99e-51 | 115 |
hematopoietic lineage restricted progenitor cell | 5.14e-41 | 120 |
hematopoietic stem cell | 1.90e-40 | 168 |
hematopoietic cell | 3.19e-37 | 177 |
hematopoietic oligopotent progenitor cell | 7.56e-36 | 161 |
hematopoietic multipotent progenitor cell | 7.56e-36 | 161 |
mature alpha-beta T cell | 2.76e-30 | 18 |
alpha-beta T cell | 2.76e-30 | 18 |
immature T cell | 2.76e-30 | 18 |
mature T cell | 2.76e-30 | 18 |
immature alpha-beta T cell | 2.76e-30 | 18 |
lymphocyte of B lineage | 5.89e-26 | 24 |
pro-B cell | 5.89e-26 | 24 |
T cell | 8.28e-25 | 25 |
pro-T cell | 8.28e-25 | 25 |
CD8-positive, alpha-beta T cell | 1.27e-19 | 11 |
B cell | 3.17e-16 | 14 |
CD4-positive, alpha-beta T cell | 5.06e-11 | 6 |
mesenchymal cell | 1.47e-08 | 354 |
connective tissue cell | 4.89e-08 | 361 |
myeloid leukocyte | 1.07e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 2.87e-15 | 15 |
haemolymphatic fluid | 2.87e-15 | 15 |
organism substance | 2.87e-15 | 15 |
hematopoietic system | 1.51e-14 | 98 |
blood island | 1.51e-14 | 98 |
hemolymphoid system | 4.39e-14 | 108 |
hemopoietic organ | 1.04e-07 | 7 |
immune organ | 1.04e-07 | 7 |
connective tissue | 2.46e-07 | 371 |