FFCP PHASE1:Hg19::chr12:58329793..58329806,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=35bp_to_ENST00000547492_5end | |||
|coexpression_cluster_id=C2227 | |||
|description=CAGE_peak_2_at_ENST00000547492_5end | |||
|id=chr12:58329793..58329806,- | |||
|ontology_enrichment_celltype=CL:0000037!4.29e-23!172;CL:0000566!4.29e-23!172;CL:0000988!5.01e-23!182;CL:0002032!1.55e-20!165;CL:0000837!1.55e-20!165;CL:0000542!4.42e-11!53;CL:0000051!4.42e-11!53;CL:0000838!2.15e-10!52;CL:0000763!3.40e-10!112;CL:0000049!3.40e-10!112;CL:0000134!1.57e-08!358;CL:0000219!2.98e-08!390;CL:0000084!4.03e-08!25;CL:0000827!4.03e-08!25;CL:0002320!6.91e-08!365;CL:0002274!8.80e-07!5;CL:0000457!8.80e-07!5;CL:0002191!8.80e-07!5;CL:0000097!8.80e-07!5;CL:0000831!8.80e-07!5;CL:0002028!8.80e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.29e-14;5!CL:0000763;9.85e-13;100!CL:0000163;5.33e-08;9!CL:0000764;3.06e-07;2!CL:0000558;3.06e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.14e-33,168;CL:0000763,2.66e-32,108;CL:0000049,2.66e-32,108;CL:0002032,6.88e-32,161;CL:0000837,6.88e-32,161;CL:0000988,2.30e-31,177;CL:0000097,1.11e-14,5;CL:0002028,1.11e-14,5;CL:0000134,1.29e-10,354;CL:0002320,3.46e-10,361;CL:0000219,1.09e-08,386;CL:0000034,3.83e-08,441;CL:0000163,4.93e-08,9;CL:0000764,3.26e-07,2;CL:0000765,3.26e-07,2;CL:0000050,3.26e-07,2;CL:0000038,3.26e-07,2;CL:0000558,3.26e-07,2;CL:0000547,3.26e-07,2;CL:0000549,3.26e-07,2;CL:0000550,3.26e-07,2;CL:0000552,3.26e-07,2;CL:0000048,7.08e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000049;2.25e-10;108 | |||
|ontology_enrichment_disease=DOID:2531!2.18e-41!51;DOID:0060083!2.18e-41!51;DOID:1240!1.24e-40!39;DOID:8692!6.30e-32!31;DOID:0050686!1.74e-13!137;DOID:1036!1.67e-10!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.90e-77;31!DOID:1240;1.31e-72;39!DOID:2531;7.24e-55;51!DOID:0060083;7.24e-55;51!DOID:1036;6.96e-24;8!DOID:0050686;1.38e-08;137 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.68e-92,39;DOID:2531,3.61e-86,51;DOID:0060083,3.61e-86,51;DOID:8692,5.76e-80,31;DOID:0050686,6.17e-27,137;DOID:1036,5.19e-24,8;DOID:162,1.60e-12,235;DOID:14566,4.66e-12,239 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.61e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.26e-08;2!UBERON:0005058;5.26e-08;2!UBERON:0009113;5.26e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.53e-10,371;UBERON:0002370,3.57e-08,4;UBERON:0005058,3.57e-08,4;UBERON:0009113,3.57e-08,4;UBERON:0003295,3.57e-08,4;UBERON:0005562,3.57e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0,0,0,0.0787107813136792,2.36018566109342,0.767658796194425,0.154816123316076,0,0,0,8.67632646499378,2.13253848731132,49.0312733689195,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0.569212969109448,0,0.382273228125229,67.4073775753032,14.5732226375199,37.9273082076111,0.196709770113833,0,0.616804496998528,0,0.32592226663359,0,0,0.668462741311041,0,0.443067789167242,0.270803863765016,0.25618263945135,0.130059347559878,0.328875809207352,1.10540007114339,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0.766440987203842,0,0,0.637130828648193,0,0,0.150575119077773,0,0,0.236777252044017,0,0.604820229674197,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0,1.37528029272598,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.612975591598039,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0,0.504867548488229,0,0,0.355009592516614,0.403008392910561,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.7316789473185,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,4.43396914106349,3.78608266256872,1.86595303986695,1.15295962733569,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,4.03506518376698,0.591092280605782,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0.535286966391485,0,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34444334449382,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06963827304308,5.22870902049801,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.573645408816206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,1.48642540100575,1.15415370381156,13.9438012962892,11.4786916364752,1.39705560002972,6.70268795463284,5.29183956809707,10.3879020887858,21.9021798928498,7.53174440809534,4.7003968731907,15.038068625404,0,5.13881840331838,5.65039180134933,0,2.06103206853459,13.8258343938806,12.5258620419753,14.0153279038003,6.05703095746325,2.78406173895242,2.46174797895425,8.11367035427949,6.99451132795422,9.86909035614947,0,0,0,0.445773537109913,1.13654458722565,0,0.296964680832639,0,0,0,0,0.494411622680279,0,0,0.552567831062295,0,0,0,0,0,0,15.3471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,40.8773192782946,1.41282230755522,15.6238980986147,2.93274358802335,6.66612616680314,3.69207491346854,3.41556718903533,4.92703394839174,0.210998064528027,0,0,0,0,0,0,0.593042257361244,0.617819694732514,0.626531697032732,0,0,0,1.27718352450966,0,0.728341138602278,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.51595809741485,0.0967563312890851,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0.509991088181609,0,0,0,7.66479528401834,0.429765441419957,0.525774708558629,0,0,0,0,0,0,0.470284307407084,0,0,0,0,0,0,0.508039992394707,0,0.272406812223151,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,4.92555124496034,6.81552087141687,0.113312091520126,0,2.65013777824443,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.310874401165561,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0.358177682162975,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,10.7758646991082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630893960010027,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0,0.80682027481408,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0.236387681767936,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,2.95536923051134,3.48353369203032,0,0,0.639701945702943,1.1903221573187,20.4746844180139,14.5875578595266,0.112131862580613,0,0,0,0.342233301085281,0,0,0,0,0.213454691755431,0,0,0,0,0,0,3.01910690386539,0 | |||
|short_description=p2@ENST00000547492 | |||
}} |
Revision as of 14:17, 11 January 2014
Short description: | p2@ENST00000547492 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000547492_5end |
Coexpression cluster: | C2227_chronic_Hodgkin_CD34_CD133_acute_thymus_liposarcoma |
Association with transcript: | 35bp_to_ENST00000547492_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.14e-33 | 168 |
myeloid cell | 2.66e-32 | 108 |
common myeloid progenitor | 2.66e-32 | 108 |
hematopoietic oligopotent progenitor cell | 6.88e-32 | 161 |
hematopoietic multipotent progenitor cell | 6.88e-32 | 161 |
hematopoietic cell | 2.30e-31 | 177 |
mast cell | 1.11e-14 | 5 |
basophil mast progenitor cell | 1.11e-14 | 5 |
mesenchymal cell | 1.29e-10 | 354 |
connective tissue cell | 3.46e-10 | 361 |
motile cell | 1.09e-08 | 386 |
stem cell | 3.83e-08 | 441 |
endocrine cell | 4.93e-08 | 9 |
erythroid lineage cell | 3.26e-07 | 2 |
erythroblast | 3.26e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 3.26e-07 | 2 |
erythroid progenitor cell | 3.26e-07 | 2 |
reticulocyte | 3.26e-07 | 2 |
proerythroblast | 3.26e-07 | 2 |
basophilic erythroblast | 3.26e-07 | 2 |
polychromatophilic erythroblast | 3.26e-07 | 2 |
orthochromatic erythroblast | 3.26e-07 | 2 |
multi fate stem cell | 7.08e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.53e-10 | 371 |
thymus | 3.57e-08 | 4 |
hemolymphoid system gland | 3.57e-08 | 4 |
thymic region | 3.57e-08 | 4 |
pharyngeal gland | 3.57e-08 | 4 |
thymus primordium | 3.57e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.68e-92 | 39 |
hematologic cancer | 3.61e-86 | 51 |
immune system cancer | 3.61e-86 | 51 |
myeloid leukemia | 5.76e-80 | 31 |
organ system cancer | 6.17e-27 | 137 |
chronic leukemia | 5.19e-24 | 8 |
cancer | 1.60e-12 | 235 |
disease of cellular proliferation | 4.66e-12 | 239 |