FFCP PHASE1:Hg19::chr12:80084137..80084165,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5074 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8614 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-277bp_to_ENST00000551712_5end | |||
|coexpression_cluster_id=C3336 | |||
|description=CAGE_peak_10_at_PAWR_5end | |||
|id=chr12:80084137..80084165,- | |||
|ontology_enrichment_celltype=CL:0000066!6.00e-31!254;CL:0000076!6.98e-20!62;CL:0000213!7.78e-18!57;CL:0000215!7.78e-18!57;CL:0002321!1.26e-16!248;CL:0000220!5.64e-16!246;CL:0002139!1.43e-13!24;CL:0000077!4.50e-11!19;CL:0000222!1.73e-10!119;CL:0000115!3.02e-10!35;CL:0002078!5.78e-10!44;CL:0000071!1.50e-09!18;CL:0002546!1.50e-09!18;CL:0000548!8.94e-08!679;CL:0000004!8.94e-08!679;CL:0000255!8.94e-08!679;CL:0000012!3.05e-07!682;CL:1000449!8.70e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.08e-17;24!CL:0000077;5.21e-15;19!CL:0000213;2.86e-14;58!CL:0000215;2.86e-14;58!CL:0000115;4.47e-12;36!CL:0000071;2.63e-11;18!CL:0002078;7.33e-09;45!CL:1000449;1.30e-08;15!CL:0000076;1.73e-08;63!CL:0002138;1.86e-08;6!CL:1000497;3.46e-07;17!CL:0002518;3.46e-07;17!CL:0002681;5.00e-07;12!CL:0002584;5.00e-07;12!CL:0002543;6.24e-07;6!CL:1000746;6.88e-07;7!CL:1000612;6.88e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.02e-25,58;CL:0000215,1.02e-25,58;CL:0000066,1.85e-23,253;CL:0002139,9.17e-18,24;CL:0000076,5.44e-16,63;CL:0000115,7.12e-15,36;CL:0000077,7.56e-15,19;CL:0002321,2.35e-13,250;CL:0002078,2.15e-12,45;CL:0000222,4.46e-12,121;CL:0000071,2.36e-11,18;CL:0002546,2.36e-11,18;CL:1000449,6.70e-09,15;CL:0005020,1.75e-08,6;CL:0002138,1.75e-08,6;CL:0005022,1.75e-08,6;CL:1000497,1.96e-07,17;CL:0002518,1.96e-07,17;CL:0002543,4.52e-07,6;CL:0002681,4.63e-07,12;CL:0002584,4.63e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;2.63e-11;18!CL:0005022;1.86e-08;6 | |||
|ontology_enrichment_disease=DOID:305!2.05e-08!106;DOID:0050687!3.64e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000487!1.88e-10!22;UBERON:0002049!3.71e-10!79;UBERON:0007798!3.71e-10!79;UBERON:0003914!1.30e-09!118;UBERON:0001986!1.50e-09!18;UBERON:0004638!1.50e-09!18;UBERON:0004852!1.50e-09!18;UBERON:0006914!1.33e-08!25;UBERON:0009569!1.40e-08!113;UBERON:0000055!2.69e-08!69;UBERON:0003886!1.02e-07!63;UBERON:0000058!2.93e-07!26;UBERON:0000477!7.40e-07!286;UBERON:0004211!8.70e-07!16;UBERON:0001285!8.70e-07!16;UBERON:0007684!8.70e-07!16;UBERON:0003220!8.70e-07!16;UBERON:0004208!8.70e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.63e-11;22!UBERON:0004638;2.63e-11;18!UBERON:0001986;2.63e-11;18!UBERON:0004852;2.63e-11;18!UBERON:0000490;5.47e-10;33!UBERON:0006914;1.84e-09;25!UBERON:0006555;1.30e-08;15!UBERON:0004819;1.30e-08;15!UBERON:0001285;1.30e-08;15!UBERON:0007684;1.30e-08;15!UBERON:0001225;5.00e-07;12!UBERON:0008987;5.00e-07;12!UBERON:0000074;6.88e-07;7!UBERON:0001229;6.88e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,1.37e-11,22;UBERON:0002049,2.00e-11,78;UBERON:0007798,2.00e-11,78;UBERON:0004638,2.36e-11,18;UBERON:0001986,2.36e-11,18;UBERON:0004852,2.36e-11,18;UBERON:0006914,1.58e-09,25;UBERON:0003914,3.34e-09,117;UBERON:0000055,6.02e-09,68;UBERON:0004211,6.70e-09,15;UBERON:0009773,6.70e-09,15;UBERON:0001231,6.70e-09,15;UBERON:0001285,6.70e-09,15;UBERON:0007684,6.70e-09,15;UBERON:0004208,6.70e-09,15;UBERON:0006555,4.05e-08,16;UBERON:0004819,4.05e-08,16;UBERON:0001225,4.63e-07,12;UBERON:0008987,4.63e-07,12 | |||
|phase1_expression=1.09007027562334,1.49870366723688,4.51054093107108,2.00146596706261,1.34088328328186,1.74467704820074,0,0,0,3.68600904752263,1.39560233594486,0.218441372130172,0.527533956456907,0.123766352960047,1.32558950291166,0,0.602694528023977,0,0,0.61560529038394,1.42800483870977,0.313454721478088,1.14494394852423,1.09499540058307,3.38965126905968,0.534893840235659,0.492603536699674,0.393553906568396,0,0,0,0,0.6024118375565,1.47901604066715,1.00707360754392,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0.426730222566507,0.400395987036012,0,1.32208974556972,0.954053754535364,1.70763890732835,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,3.06870148424473,0,0.50133791063589,1.73815822752988,0,0,1.32348744029695,3.54767035940102,4.74307842742881,0.458426764241994,0.728590576585084,0.370784442784429,0,0,0,0,0,0,1.78886166630035,0.860234595106124,1.04142150482278,1.13061588384802,0.838998872419812,2.47606237746061,0.835979866147242,6.46041897923322,6.75955899104749,15.7318687999395,6.44526907374635,13.6848979029332,6.34561349625241,2.94130464276695,5.67099363517232,3.12549048994279,2.91888184414021,2.92789849256638,3.06633274931766,2.84779697870439,2.38162267109529,0,0,0,0.993943903390637,2.91250176828533,1.45650098894541,2.29469296599051,1.41867352879343,4.48542080113846,0,2.71334303258876,0.622422070799533,0.538842688278752,0.163461903113459,1.81628913173918,1.72852777344,0.234321431833797,0,0,0,0.23486899728753,0,0,0.204154171254893,0.245668634623536,0,0,0.741800787835671,0,0.718618141816238,0,0,0.277064115484183,1.75591048352335,1.83892677479412,0.600952235626387,1.47461838108027,0.717558542755448,1.70845911054854,2.11931901159562,0.900273288253207,1.23663035086127,0.515281080091258,0.744467425326359,0.337552664482532,1.07180705677318,0.252433774244115,1.01254888506529,0.969876340912871,1.42003837006646,0.302256294682921,0.847802961552438,0.386521706326594,0.272746120590835,0.573609190778008,2.6834215348511,1.45782745153634,2.44007280025989,1.86589899027667,3.02785021050754,2.18986415445498,0,0.643240938192885,0,0.928735856063958,0,1.0647612003586,1.01150814046861,0.482022059766964,0.992645754591546,1.52515610864684,0.237270619111097,0.943819157121151,0.98110732562673,0,0.738155454624648,0,1.6462960453256,0,0,0,0,0,0.368965315629341,0.171567810298526,0.878002283269004,1.1240175325762,1.00528972411631,0.555530670951178,0,0,1.44331342025273,0.463721619900307,10.3319650927523,7.07395594029262,3.70388410061289,7.41991193714933,0.790204397959275,0,0,0,0,1.87467667973554,1.6798212819886,0.992425680696705,1.52249488594842,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.784917590417525,3.48768055066624,1.24675085895615,3.10252117818667,0,0,2.6593811658487,3.12022310734098,0.514414748524284,1.41849132023278,0.266422179016099,1.14382394926518,0,0.823240336780769,0,1.42156779497018,0,0.904318131178758,2.61460037580088,2.29937879718731,0,0,0,1.91699884393266,0,0,0.723906533337896,1.02738161275192,0.716243852959582,0,0,0,0,0,1.30139853857622,2.31986643833309,0.167516265334349,0,0,0,0.414415513436035,0.12269149171914,0,0,2.28767947683888,3.56857977594324,2.36553622550902,2.6942525448324,1.50473049863859,0,0,3.98535359121262,3.50301420229236,0,0.391602314925481,1.02943027143257,0,0.215714200818617,0,0.909382714338778,0,0.604780586659361,0.992431231275107,4.75732117192994,1.68396056659844,2.56278298511402,6.65219423786715,1.60853921143608,1.48418066444991,0,0.177561725313127,0,0,0.116210378459959,0.483437798366489,1.00253235151642,0.276242966807689,0.114814448164607,0.546273504020151,0.262248829918848,4.06079651616671,1.84836809050595,1.56869953835371,1.46139224653261,1.79437769117889,1.13733384070897,1.02056223165909,1.51141141271498,7.71136263451447,4.87703587578935,5.01689773854853,0.509752546090077,1.66215201785745,0.671624264166535,0,0,0,3.28014645699706,2.60302715731442,0.721287081534056,0.366277859273374,0.165018999841176,0.574265537996172,0.650060246036521,4.82051789532479,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0.255679882248303,0.0890320356467374,1.4875642382488,1.15314040419064,1.14851441245126,1.31505115112215,0.464845549297286,0.31481234683064,1.3940745403212,0,0.532306030317022,0.869932992075073,1.66791797193528,5.43874569619567,1.116475108079,1.58189712359363,0.571890581771475,0,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0,1.2130948894399,0,0,0.48763373908959,0.487426979262569,1.05650146756755,0.409499734223957,0.424216295861138,0,1.10273068709225,1.99031692572366,1.31535265576129,0,0,0.608731130888112,0.92947049429925,0.281695602532241,0.143411352204052,0.196498082026242,0.7133421029625,0.354761064070598,0.633322905892992,0,0,0.349934720244983,0.384888450902048,0,0,0.376575203107117,0.86101074534246,0,0,1.37834040124176,0,0,0,0,0,0,0,0,1.70918513803957,0,0.245040215981032,0.371606350251437,0,0.497992903438899,0.159426272728822,0,0,0,0.649243880549111,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.970884173996107,0,0.852408440419239,0,1.18785872333055,0,0,0.140669416410513,0.222617410045812,0.494411622680279,0.211125408127993,0.597743964753209,0.276283915531148,0.503865495708552,0.409074730008619,0.246169610922139,0.311039587661807,3.14539229015644,0.358042349351218,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,2.3438498497671,0.787139999965761,0.724999575434793,0.910347586283997,0.254253650292766,1.18193840883968,0.689486746482929,0,0,0,0.241192877250816,0,0,0,0,0.653630781113941,0.41827123283581,0.692552326534174,3.07643550786903,0.23056390438806,0.987334088507493,0.651884231532048,0.638002319463839,2.47313502185028,1.06606955203727,1.02193298195737,0,0,0,0,0,0,0,0.421996129056054,3.26465616318295,0.848118428603645,0,0.995261931078505,0.442287822516696,0,0.593042257361244,0.123563938946503,0.313265848516366,0.134802265961354,0,0.234264445725339,0.547364367646998,0,0.485560759068186,0,0,0,0.63186579628488,0.901940516486955,0.207376382794494,0.664653872707185,0.992975867626496,0.627865836814451,0,0.853828638089378,0,0.347119476670262,0.979923974143776,1.56706571844725,0.17472666824203,1.37588825977293,0.19351266257817,0.730893170861856,0.656923656425674,0.581934098930517,12.6206261168845,0,2.46675464364152,0.596143835108969,0,0.195551382734803,3.52698809106748,0.640358984218058,1.39866726707491,0.432271251462318,0.343609788497747,0.343189995723929,0.14405479798815,0.372757606696298,0.707082103850386,0.67952103036807,1.569042694685,0.407992870545287,0.577901179803038,0.600420288709789,0,0,0.429765441419957,0,0.558564802544508,0,0,0,0,0.446342914883745,0.134366944973453,0,0,0.551482276150566,0.988990300573997,0.404421263125109,0.393709926058995,0.169346664131569,0,0,0.964518890790115,0.962776056180637,2.07720169014593,0,0,0.121499113316049,0.670869375198532,0.472834243795189,1.41627387964495,2.11200673038813,0.179287339332845,3.45447355175002,0,0,0.76280561296425,0.542999601753713,0.864221491201268,0,3.59190574687462,0,0.851940108927109,0.113312091520126,0.293104467356165,0,0.129282956361551,0,0.684347351537318,0,0.640724475406168,0.943225830597996,0.414239055347196,0,0.197611631897944,0,0.638341257770182,0.544017803369474,0,0,0.655745261419609,1.09937867375164,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.18628920882415,1.52183498429854,0.874862855734746,0.151649117541648,0,1.6468607378872,0,0.28984205722165,0.149254802886874,0,0,0.378806010550178,0.50313580350515,0,0.686520205190771,0.302461847526478,0,0.147855149989634,0.318593534327405,0,0.621051827505038,0,1.06336685823198,0,1.20206087197775,0.761610424337591,0,0,0.859284456339908,0,1.59238355479446,0.400027764663154,0,0.336749488765919,0,0.770479321629213,6.6476893326227,15.6596575179127,8.61482516946635,4.16740453782901,2.44736704506468,2.68633261622231,5.5584260488975,2.19284049578707,1.76689145945881,6.94490537775293,2.19625172848994,4.35610581599509,1.0362910251936,3.03859956177382,0,0,0,0,0.982829546539238,0.491545817507439,0.633936370075881,0.79994958341972,0.106691729694141,0,2.27006381426734,0,0.559518030877778,0.622077260032973,0,0,0.629063767423586,0,0.169732529954025,0,0,1.11728983594649,2.22603045457393,1.57723490002507,0,0.352675943690684,3.9811912055916,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.138314504928436,0,0,1.27592034051333,0.471878893390961,0.733714394086716,1.96393632455575,0.762764190934334,1.3807198521202,0.198916222116275,0.526472298444801,2.82387096184928,0,2.88097363929565,2.62035068016155,2.06998520703863,0.135075169236789,0,0,0.19024743058172,0,0,0,0.351742488719241,2.17196126987312,0,1.00885116665647,0,0.227662191351298,0.532214220975833,0.115233987555779,0.685952037749674,0.0679697329768317,0.131545547125698,1.30013224972365,0.111231401892069,0.235479278551542,0.157115589916002,1.40136081656895,0.913158720509496,0.215927591218621,0,0.142953088353313,0.316027223465453,0.813689977576877,0,0,0.414432328326074,0.6828739083758,0,0,0.354996002191696,0.170426809518315,0.423387050190929,1.8328549483524,0.31020638566432,0,1.11855431797792,0.196300467230486,0.487671699929078,0,0.205325613712494,0,0.485710993059139,0,0.198950775161368,0,3.16249029709088,0.329821550236287,0.452888530700021,0.231522474323834,0,0,0.490296643507811,0.471353094203252,0,0,0,2.54890672031725,0.187967835959707,0.193373663920732,0.399764623699716,0.535661815816973,1.41157948686277,0.722172300202514,0,0,0.430018749454354,0,0,0.436350690340377,0.5290268405154,0.371995018166751,0.924351257262837,0,3.15416062087697,1.52971800749174,0.126698501011437,8.56706169832647,7.48208734743569,18.4708748065038,2.25636785363138,0.378893491091197,0.535928260312357,0,0.310298987585686,0.213233981900981,0.23806443146374,0.452122368852043,0.620747142958579,3.70035146516024,0.636471582781649,0.202117188958219,0.217716747896961,0,0.336760265072938,0.358611026963382,0.665320713092027,0.651226148887796,1.81436487992116,0,1.79650404213174,0,1.34465588601153,0.813792356631477,0,0.603821380773079,0 | |||
|short_description=p10@PAWR | |||
}} |
Revision as of 14:53, 11 January 2014
Short description: | p10@PAWR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PAWR_5end |
Coexpression cluster: | C3336_mesothelioma_testicular_extraskeletal_Endothelial_Lens_pancreatic_Renal |
Association with transcript: | -277bp_to_ENST00000551712_5end |
EntrezGene: | PAWR |
HGNC: | 8614 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.02e-25 | 58 |
barrier cell | 1.02e-25 | 58 |
epithelial cell | 1.85e-23 | 253 |
endothelial cell of vascular tree | 9.17e-18 | 24 |
squamous epithelial cell | 5.44e-16 | 63 |
endothelial cell | 7.12e-15 | 36 |
mesothelial cell | 7.56e-15 | 19 |
embryonic cell | 2.35e-13 | 250 |
meso-epithelial cell | 2.15e-12 | 45 |
mesodermal cell | 4.46e-12 | 121 |
blood vessel endothelial cell | 2.36e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.36e-11 | 18 |
epithelial cell of nephron | 6.70e-09 | 15 |
lymphangioblast | 1.75e-08 | 6 |
endothelial cell of lymphatic vessel | 1.75e-08 | 6 |
vascular lymphangioblast | 1.75e-08 | 6 |
kidney cell | 1.96e-07 | 17 |
kidney epithelial cell | 1.96e-07 | 17 |
vein endothelial cell | 4.52e-07 | 6 |
kidney cortical cell | 4.63e-07 | 12 |
renal cortical epithelial cell | 4.63e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 1.37e-11 | 22 |
vasculature | 2.00e-11 | 78 |
vascular system | 2.00e-11 | 78 |
blood vessel endothelium | 2.36e-11 | 18 |
endothelium | 2.36e-11 | 18 |
cardiovascular system endothelium | 2.36e-11 | 18 |
squamous epithelium | 1.58e-09 | 25 |
epithelial tube | 3.34e-09 | 117 |
vessel | 6.02e-09 | 68 |
nephron epithelium | 6.70e-09 | 15 |
renal tubule | 6.70e-09 | 15 |
nephron tubule | 6.70e-09 | 15 |
nephron | 6.70e-09 | 15 |
uriniferous tubule | 6.70e-09 | 15 |
nephrogenic mesenchyme | 6.70e-09 | 15 |
excretory tube | 4.05e-08 | 16 |
kidney epithelium | 4.05e-08 | 16 |
cortex of kidney | 4.63e-07 | 12 |
renal parenchyma | 4.63e-07 | 12 |