FFCP PHASE1:Hg19::chr13:32838801..32838818,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10129 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20367 | |||
|TSSclassifier=strong | |||
|UniProt=F5H4D2 | |||
|association_with_transcript=0bp_to_ENST00000542859,uc010tdx.1_5end | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_9_at_FRY_5end | |||
|id=chr13:32838801..32838818,+ | |||
|ontology_enrichment_celltype=CL:0000115!8.60e-35!35;CL:0002139!1.57e-32!24;CL:0002078!4.23e-25!44;CL:0000071!5.58e-25!18;CL:0002546!5.58e-25!18;CL:0000213!1.11e-16!57;CL:0000215!1.11e-16!57;CL:0000222!1.14e-14!119;CL:1000413!3.09e-13!9;CL:0002543!1.32e-09!6;CL:0002544!1.76e-09!6;CL:0005020!4.44e-09!6;CL:0002138!4.44e-09!6;CL:0005022!4.44e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.41e-89;24!CL:0000115;1.13e-85;36!CL:0000071;2.13e-67;18!CL:0002078;7.68e-51;45!CL:0000213;8.31e-37;58!CL:0000215;8.31e-37;58!CL:1000413;3.07e-34;9!CL:0002543;4.59e-24;6!CL:0002544;1.14e-23;6!CL:0002138;1.39e-22;6!CL:0002618;8.45e-13;3!CL:0002188;2.49e-12;5!CL:0002144;3.17e-12;3!CL:0000708;4.90e-11;3!CL:0000076;2.90e-10;63!CL:0002545;6.94e-09;2!CL:1000746;8.09e-09;7!CL:1000612;8.09e-09;7!CL:0002262;1.19e-08;2!CL:1000398;1.19e-08;2!CL:0002367;8.36e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.89e-103,36;CL:0002139,6.98e-89,24;CL:0002078,1.41e-80,45;CL:0000071,1.80e-67,18;CL:0002546,1.80e-67,18;CL:0000213,1.13e-60,58;CL:0000215,1.13e-60,58;CL:1000413,2.85e-34,9;CL:0000222,1.24e-26,121;CL:0002543,4.60e-24,6;CL:0002544,1.04e-23,6;CL:0005020,1.37e-22,6;CL:0002138,1.37e-22,6;CL:0005022,1.37e-22,6;CL:0000076,6.44e-16,63;CL:0002618,8.13e-13,3;CL:0002188,2.57e-12,5;CL:0002144,2.88e-12,3;CL:0000708,3.96e-11,3;CL:0002321,5.09e-11,250;CL:0000066,2.50e-09,253;CL:0002545,6.68e-09,2;CL:1000746,8.26e-09,7;CL:1000612,8.26e-09,7;CL:0002262,1.23e-08,2;CL:1000398,1.23e-08,2;CL:0002367,8.37e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002546;2.13e-67;18!CL:0005022;1.39e-22;6!CL:0000222;2.77e-11;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.58e-25!18;UBERON:0004638!5.58e-25!18;UBERON:0004852!5.58e-25!18;UBERON:0000477!1.77e-23!286;UBERON:0002049!4.18e-23!79;UBERON:0007798!4.18e-23!79;UBERON:0004111!1.04e-22!241;UBERON:0000055!1.00e-21!69;UBERON:0000119!1.18e-21!312;UBERON:0000487!3.07e-21!22;UBERON:0001009!5.34e-21!113;UBERON:0000025!5.36e-21!194;UBERON:0004872!3.89e-20!84;UBERON:0004535!6.31e-20!110;UBERON:0000483!7.85e-20!309;UBERON:0003914!3.42e-18!118;UBERON:0007023!7.41e-18!115;UBERON:0006914!8.29e-18!25;UBERON:0001981!1.32e-17!60;UBERON:0007500!1.32e-17!60;UBERON:0004537!1.32e-17!60;UBERON:0006965!1.32e-17!60;UBERON:0003915!3.09e-13!9;UBERON:0004700!3.09e-13!9;UBERON:0001917!3.09e-13!9;UBERON:0000490!6.64e-12!138;UBERON:0000468!3.07e-11!659;UBERON:0000481!1.79e-10!347;UBERON:0000467!1.94e-09!625;UBERON:0000480!2.34e-09!626;UBERON:0000922!1.27e-08!612;UBERON:0002050!2.70e-08!605;UBERON:0005423!2.70e-08!605;UBERON:0000923!6.42e-08!604;UBERON:0005291!6.42e-08!604;UBERON:0006598!6.42e-08!604;UBERON:0002532!6.42e-08!604;UBERON:0002465!8.68e-08!10;UBERON:0001638!1.38e-07!9;UBERON:0003920!1.38e-07!9;UBERON:0004582!1.38e-07!9;UBERON:0001637!6.18e-07!42;UBERON:0003509!6.18e-07!42;UBERON:0004572!6.18e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.13e-67;18!UBERON:0001986;2.13e-67;18!UBERON:0004852;2.13e-67;18!UBERON:0000487;2.85e-54;22!UBERON:0006914;3.48e-47;25!UBERON:0003915;3.07e-34;9!UBERON:0004700;3.07e-34;9!UBERON:0001917;3.07e-34;9!UBERON:0000490;9.05e-32;33!UBERON:0000055;2.43e-19;65!UBERON:0001473;8.99e-17;8!UBERON:0004536;8.99e-17;8!UBERON:0006558;8.99e-17;8!UBERON:0001638;8.47e-16;9!UBERON:0003920;8.47e-16;9!UBERON:0004582;8.47e-16;9!UBERON:0007500;1.22e-14;56!UBERON:0001981;1.22e-14;56!UBERON:0004537;1.22e-14;56!UBERON:0002049;1.44e-13;75!UBERON:0007798;1.44e-13;75!UBERON:0002465;2.78e-13;10!UBERON:0010523;3.17e-12;3!UBERON:0001915;3.17e-12;3!UBERON:0001982;3.17e-12;3!UBERON:0003914;1.28e-11;74!UBERON:0003210;4.90e-11;3!UBERON:0000025;1.40e-10;93!UBERON:0004535;3.76e-10;109!UBERON:0001009;5.31e-09;112!UBERON:0005800;6.94e-09;2!UBERON:0001515;6.94e-09;2!UBERON:0000074;8.09e-09;7!UBERON:0001229;8.09e-09;7!UBERON:0001281;1.19e-08;2!UBERON:0003497;1.19e-08;2!UBERON:0003909;1.19e-08;2!UBERON:0003835;1.19e-08;2!UBERON:0000353;1.60e-08;15!UBERON:0002066;7.89e-08;5!UBERON:0005969;8.36e-08;2!UBERON:0003956;8.36e-08;2!UBERON:0004111;1.03e-07;130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.80e-67,18;UBERON:0001986,1.80e-67,18;UBERON:0004852,1.80e-67,18;UBERON:0000487,2.48e-54,22;UBERON:0006914,3.09e-47,25;UBERON:0003915,2.85e-34,9;UBERON:0004700,2.85e-34,9;UBERON:0001917,2.85e-34,9;UBERON:0000055,1.89e-32,68;UBERON:0002049,4.94e-32,78;UBERON:0007798,4.94e-32,78;UBERON:0001009,3.66e-29,112;UBERON:0004535,3.17e-28,109;UBERON:0007500,9.39e-22,59;UBERON:0001981,9.39e-22,59;UBERON:0004537,9.39e-22,59;UBERON:0006965,9.39e-22,59;UBERON:0004872,7.31e-21,83;UBERON:0003914,2.19e-20,117;UBERON:0001473,8.88e-17,8;UBERON:0004536,8.88e-17,8;UBERON:0006558,8.88e-17,8;UBERON:0001638,8.47e-16,9;UBERON:0003920,8.47e-16,9;UBERON:0004582,8.47e-16,9;UBERON:0004111,5.57e-15,240;UBERON:0000025,1.70e-13,192;UBERON:0002465,2.76e-13,10;UBERON:0010523,2.88e-12,3;UBERON:0001915,2.88e-12,3;UBERON:0001982,2.88e-12,3;UBERON:0003210,3.96e-11,3;UBERON:0000119,3.91e-10,309;UBERON:0005800,6.68e-09,2;UBERON:0001515,6.68e-09,2;UBERON:0010532,8.26e-09,7;UBERON:0000074,8.26e-09,7;UBERON:0001229,8.26e-09,7;UBERON:0001230,8.26e-09,7;UBERON:0003220,8.26e-09,7;UBERON:0005749,8.26e-09,7;UBERON:0004199,8.26e-09,7;UBERON:0004209,8.26e-09,7;UBERON:0004198,8.26e-09,7;UBERON:0001281,1.23e-08,2;UBERON:0003497,1.23e-08,2;UBERON:0003909,1.23e-08,2;UBERON:0003835,1.23e-08,2;UBERON:0000353,1.64e-08,15;UBERON:0000490,3.90e-08,148;UBERON:0000483,3.95e-08,306;UBERON:0003081,6.23e-08,203;UBERON:0002066,7.72e-08,5;UBERON:0005969,8.37e-08,2;UBERON:0003956,8.37e-08,2;UBERON:0005103,1.04e-07,8;UBERON:0000083,1.04e-07,8;UBERON:0009201,1.04e-07,8;UBERON:0006553,1.04e-07,8;UBERON:0003074,1.04e-07,8;UBERON:0003060,1.04e-07,8;UBERON:0000080,7.47e-07,9;UBERON:0002120,7.47e-07,9;UBERON:0004875,7.47e-07,9;UBERON:0005721,7.47e-07,9;UBERON:0005754,7.47e-07,9;UBERON:0007297,7.47e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.767175371061182,0,0,0,0,0,0,0,0.263504357079378,0.982343066232845,0,0,0,0,0,0,0,0,10.3356451830687,8.60234595106124,11.4556365530506,13.5673906061762,6.71199097935849,5.50236083880135,8.15080369493561,8.0109195342492,8.18262404179434,5.69025041699939,6.44526907374635,9.88353737434066,3.66093086322254,12.8682078121054,4.86085168729056,20.3603380487702,7.4094692966636,10.5854791654323,15.3316637465883,16.1375162126582,10.0760959161724,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,2.48968828319813,2.02066008104532,2.7788523529288,0.756787138224657,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0.408308342509787,0,0,0,0,0,0,0,0.375355559615893,0,0,0,0,0.907457465280168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,6.64339909162183,4.20725321410337,0.4115740113314,0,0,0,1.18157981336281,0,0,0.514703430895577,0,0,0,0,0,2.07986957055916,0,0,0,5.63029146268188,4.62985512576611,3.42457474022277,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,2.46688385559794,1.74384027533312,1.83345714552375,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0.823240336780769,0.65147236858747,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,9.09867072567173,9.18506008493184,3.23873874153209,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0.616067160352178,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0.424216295861138,0,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,1.89736586882858,1.04980416073495,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,3.22317994398167,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,3.62499787717397,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.442287822516696,0,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0,0,0.61214552326098,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.458320848023367,0.717873024576814,0.599037001496973,0,1.33902874465124,0.873385142327441,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.788057072991982,0.734364233889974,0,2.51002275065983,0,0,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0.58620893471233,0,0.129282956361551,0.13223260174269,0,0,3.20362237703084,3.93010762749165,3.31391244277756,0.496166021811951,0,0,0,0.544017803369474,1.2534494701135,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.82731361184183,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.709618961301111,0,0,0.135939465953663,0.0657727735628491,0,0,0.470958557103084,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0.0939839179798536,0.773494655682926,0,0,0,0,1.46067277649303,0,0.143339583151451,0,0,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,0,0.20686599172379,0.213233981900981,0.952257725854961,0,0.558672428662721,0,0.891060215894309,0.808468755832877,0,0,0.0673520530145875,0.430333232356058,0,0,0,0,0,0,0.977931553462932,0.813792356631477,0.665756774185513,0.402547587182052,0 | |||
|short_description=p9@FRY | |||
}} |
Revision as of 17:15, 11 January 2014
Short description: | p9@FRY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FRY_5end |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | 0bp_to_ENST00000542859, uc010tdx.1_5end |
EntrezGene: | FRY |
HGNC: | 20367 |
UniProt: | F5H4D2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.89e-103 | 36 |
endothelial cell of vascular tree | 6.98e-89 | 24 |
meso-epithelial cell | 1.41e-80 | 45 |
blood vessel endothelial cell | 1.80e-67 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.80e-67 | 18 |
lining cell | 1.13e-60 | 58 |
barrier cell | 1.13e-60 | 58 |
endothelial cell of artery | 2.85e-34 | 9 |
mesodermal cell | 1.24e-26 | 121 |
vein endothelial cell | 4.60e-24 | 6 |
aortic endothelial cell | 1.04e-23 | 6 |
lymphangioblast | 1.37e-22 | 6 |
endothelial cell of lymphatic vessel | 1.37e-22 | 6 |
vascular lymphangioblast | 1.37e-22 | 6 |
squamous epithelial cell | 6.44e-16 | 63 |
endothelial cell of umbilical vein | 8.13e-13 | 3 |
glomerular endothelial cell | 2.57e-12 | 5 |
capillary endothelial cell | 2.88e-12 | 3 |
leptomeningeal cell | 3.96e-11 | 3 |
embryonic cell | 5.09e-11 | 250 |
epithelial cell | 2.50e-09 | 253 |
thoracic aorta endothelial cell | 6.68e-09 | 2 |
glomerular cell | 8.26e-09 | 7 |
kidney corpuscule cell | 8.26e-09 | 7 |
endothelial cell of sinusoid | 1.23e-08 | 2 |
endothelial cell of hepatic sinusoid | 1.23e-08 | 2 |
trabecular meshwork cell | 8.37e-08 | 2 |