FFCP PHASE1:Hg19::chr13:38153184..38153228,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_at_chr13:38153184..38153228,- | |||
|id=chr13:38153184..38153228,- | |||
|ontology_enrichment_celltype=CL:0000055!4.33e-23!180;CL:0000057!6.97e-15!75;CL:0000680!2.23e-12!57;CL:0000056!2.23e-12!57;CL:0000355!2.23e-12!57;CL:0002334!5.04e-11!12;CL:0000187!1.03e-10!54;CL:0000393!2.08e-09!60;CL:0000211!2.08e-09!60;CL:0000183!4.83e-09!59;CL:0000222!2.41e-08!119;CL:0000048!4.38e-08!430;CL:0000723!6.61e-08!436;CL:0002494!2.93e-07!16;CL:0000034!3.09e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.40e-14;12!CL:0002580;1.21e-09;3!CL:0002579;1.59e-09;3!CL:1000306;7.05e-07;4!CL:0002547;7.05e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.41e-15,76;CL:0002334,1.99e-14,12;CL:0002580,1.16e-09,3;CL:0002579,1.34e-09,3;CL:1000306,6.18e-07,4;CL:0002547,6.18e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.23e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.32e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.67e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!5.51e-14!61;UBERON:0002036!5.51e-14!61;UBERON:0003082!5.51e-14!61;UBERON:0002385!3.56e-13!63;UBERON:0001015!3.56e-13!63;UBERON:0000383!3.56e-13!63;UBERON:0004290!9.59e-11!70;UBERON:0000914!3.64e-10!83;UBERON:0002329!3.64e-10!83;UBERON:0003077!3.64e-10!83;UBERON:0003059!3.64e-10!83;UBERON:0007282!3.64e-10!83;UBERON:0009618!3.64e-10!83;UBERON:0007285!3.64e-10!83;UBERON:0001637!1.70e-09!42;UBERON:0003509!1.70e-09!42;UBERON:0004572!1.70e-09!42;UBERON:0004872!6.87e-09!84;UBERON:0000486!1.13e-07!82;UBERON:0004573!2.75e-07!33;UBERON:0004571!2.75e-07!33;UBERON:0000490!4.52e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;7.05e-07;4!UBERON:0000415;7.05e-07;4!UBERON:0007240;7.05e-07;4!UBERON:0005742;7.05e-07;4!UBERON:0005734;7.05e-07;4!UBERON:0004664;7.05e-07;4!UBERON:0004663;7.05e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,6.18e-07,4;UBERON:0007240,6.18e-07,4;UBERON:0005742,6.18e-07,4;UBERON:0005734,6.18e-07,4;UBERON:0004664,6.18e-07,4;UBERON:0004663,6.18e-07,4 | |||
|phase1_expression=0.54503513781167,0,0.845726424575827,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,2.01697543935533,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.722878304769133,0.50133791063589,0.144846518960824,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,13.4182426957736,0.886413581652058,1.58891016975863,4.58938593198102,3.19201543978521,0,0,2.96001058100592,0.933633106199299,2.82892411346345,4.08654757783647,0,2.88087962239999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.919463387397059,0.150238058906597,3.06266894532057,0.717558542755448,1.49490172172997,1.05965950579781,0.600182192168805,0.412210116953756,1.54584324027377,0.930584281657949,0,0.0974370051611986,1.7670364197088,0.552299391853796,0,1.42003837006646,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0,0,0,0,0,0,0.352226082707465,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42198887333556,0,2.535908257668,1.06375246633948,2.08014873822732,0,0,0,0.428933980974443,0,0,0.65147236858747,0.710783897485092,0,7.23454504943007,8.71533458600294,17.2953274744959,0,0,0,1.91699884393266,2.29723871668228,0,0.868687840005475,0.205476322550383,1.07436577943937,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,5.61521326133179,6.42344359669782,0.788512075169673,0.468565659970853,0.300946099727719,0,1.03473071292505,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,5.95458738765064,2.455391572609,7.01650236082684,3.71603532841533,2.55853624533352,8.20354997832398,0,0.771048469013278,2.30830242907065,0.328508624055237,2.59627214591811,0.697262270759755,0,0,0,0.574072240823034,1.0925470080403,0.524497659837696,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.676695028044854,0.154048617114644,0.614014698904518,0.413509717453592,0.859361958946189,0.145016693914229,0.426133137080504,3.56128142586949,0.165284915360978,0.576570202095319,0,0,0.464845549297286,1.5740617341532,0,0.616067160352178,0.532306030317022,0,0.9266210955196,1.5743737541619,0,0.316379424718726,0,0,0.42793898803392,0,0.78494864019923,0.179872457583315,0.823611089208164,0.942499218765491,0.202182481573316,1.58510321173008,0.842516912477962,0,0.974853958525138,0,0.818999468447914,7.7772987574542,0,0,0,0.876901770507525,0,0,0.811641507850816,0.30982349809975,0,0,0,1.426684205925,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,4.01288823649394,0,0,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.523014231561666,0,0,0,0,0,0.429765441419957,0,0.837847203816763,0,0,0,0,0,0.201550417460179,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701139929541673,2.21922344601045,0.568209015825267,0.251567901752575,0,0.686520205190771,0,0.310874401165561,0.147855149989634,0,0.899606224327209,1.08684069813382,1.24411862352257,5.58267600571789,6.78268580355254,1.95334891696384,14.851403274583,0.406870733204662,0.363697318405119,0.859284456339908,0,2.3885753321917,0.400027764663154,4.8075398725591,4.04099386519103,0,0.192619830407303,0,0,7.48129554190499,0,0.97894681802587,0.71635536432595,0,1.31570429747224,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0.491545817507439,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,3.18004350653419,0,0,5.99549104274163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,1.31017534008077,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,4.88213986546126,0,0,0.828864656652147,0.51215543128185,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,5.799072156691,4.37139893753226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.13693881688831,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,9.29987545416878,0.924351257262837,4.75889218336168,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.952257725854961,0,0,0.112131862580613,0,0,0,0.684466602170562,0,0.0717222053926763,1.66330178273007,0,0,0,0,2.34640942403454,0.122241444182866,1.62758471326295,0,0.201273793591026,0 | |||
|short_description=p@chr13:38153184..38153228,- | |||
}} |
Revision as of 17:22, 11 January 2014
Short description: | p@chr13:38153184..38153228, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr13:38153184..38153228, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.41e-15 | 76 |
preadipocyte | 1.99e-14 | 12 |
preadipocyte of the breast | 1.16e-09 | 3 |
omentum preadipocyte | 1.34e-09 | 3 |
fibroblast of tunica adventitia of artery | 6.18e-07 | 4 |
fibroblast of the aortic adventitia | 6.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 6.18e-07 | 4 |
tunica adventitia of artery | 6.18e-07 | 4 |
adventitia | 6.18e-07 | 4 |
tunica adventitia of blood vessel | 6.18e-07 | 4 |
aorta tunica adventitia | 6.18e-07 | 4 |
aorta wall | 6.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.67e-09 | 14 |