FFCP PHASE1:Hg19::chr17:34901366..34901511,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79893 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19357 | |||
|TSSclassifier=strong | |||
|UniProt=A8K3S2 | |||
|association_with_transcript=0bp_to_AK290687_5end | |||
|description=CAGE_peak_2_at_GGNBP2_5end | |||
|id=chr17:34901366..34901511,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.16e-08!18;CL:0000789!1.16e-08!18;CL:0002420!1.16e-08!18;CL:0002419!1.16e-08!18;CL:0000790!1.16e-08!18;CL:0000625!1.45e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.13e-08;18!CL:0000789;1.13e-08;18!CL:0002419;1.13e-08;18!CL:0000625;1.48e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.16e-08,18;CL:0000789,1.16e-08,18;CL:0002420,1.16e-08,18;CL:0002419,1.16e-08,18;CL:0000790,1.16e-08,18;CL:0000625,1.45e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.13e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.36e-13!115;UBERON:0002616!6.57e-12!59;UBERON:0000955!1.14e-11!69;UBERON:0006238!1.14e-11!69;UBERON:0001049!1.17e-11!57;UBERON:0005068!1.17e-11!57;UBERON:0006241!1.17e-11!57;UBERON:0007135!1.17e-11!57;UBERON:0001017!1.48e-10!82;UBERON:0002780!1.60e-10!41;UBERON:0001890!1.60e-10!41;UBERON:0006240!1.60e-10!41;UBERON:0003080!3.47e-10!42;UBERON:0000073!5.04e-10!94;UBERON:0001016!5.04e-10!94;UBERON:0005743!4.31e-09!86;UBERON:0002020!1.58e-08!34;UBERON:0003528!1.58e-08!34;UBERON:0001869!6.68e-08!32;UBERON:0001893!6.82e-08!34;UBERON:0002791!1.77e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.17e-07;53!UBERON:0002616;1.17e-07;53!UBERON:0002780;1.28e-07;41!UBERON:0001890;1.28e-07;41!UBERON:0003528;2.22e-07;34!UBERON:0002020;2.22e-07;34!UBERON:0001869;5.35e-07;32!UBERON:0002791;6.51e-07;32!UBERON:0001893;7.05e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.86e-13,114;UBERON:0000073,4.34e-12,53;UBERON:0002616,4.34e-12,53;UBERON:0001049,5.92e-12,56;UBERON:0005068,5.92e-12,56;UBERON:0006241,5.92e-12,56;UBERON:0007135,5.92e-12,56;UBERON:0000955,6.41e-12,68;UBERON:0006238,6.41e-12,68;UBERON:0001016,1.07e-11,89;UBERON:0001017,9.27e-11,81;UBERON:0002780,1.60e-10,41;UBERON:0001890,1.60e-10,41;UBERON:0003080,1.60e-10,41;UBERON:0006240,1.60e-10,41;UBERON:0003528,1.58e-08,34;UBERON:0002020,1.58e-08,34;UBERON:0001869,6.68e-08,32;UBERON:0001893,6.82e-08,34;UBERON:0002791,1.09e-07,32 | |||
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| |||
|short_description=p2@GGNBP2 | |||
}} |
Revision as of 14:50, 20 January 2014
Short description: | p2@GGNBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GGNBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK290687_5end |
EntrezGene: | GGNBP2 |
HGNC: | 19357 |
UniProt: | A8K3S2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.16e-08 | 18 |
alpha-beta T cell | 1.16e-08 | 18 |
immature T cell | 1.16e-08 | 18 |
mature T cell | 1.16e-08 | 18 |
immature alpha-beta T cell | 1.16e-08 | 18 |
CD8-positive, alpha-beta T cell | 1.45e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.86e-13 | 114 |
regional part of nervous system | 4.34e-12 | 53 |
regional part of brain | 4.34e-12 | 53 |
neural tube | 5.92e-12 | 56 |
neural rod | 5.92e-12 | 56 |
future spinal cord | 5.92e-12 | 56 |
neural keel | 5.92e-12 | 56 |
brain | 6.41e-12 | 68 |
future brain | 6.41e-12 | 68 |
nervous system | 1.07e-11 | 89 |
central nervous system | 9.27e-11 | 81 |
regional part of forebrain | 1.60e-10 | 41 |
forebrain | 1.60e-10 | 41 |
anterior neural tube | 1.60e-10 | 41 |
future forebrain | 1.60e-10 | 41 |
brain grey matter | 1.58e-08 | 34 |
gray matter | 1.58e-08 | 34 |
cerebral hemisphere | 6.68e-08 | 32 |
telencephalon | 6.82e-08 | 34 |
regional part of telencephalon | 1.09e-07 | 32 |