FFCP PHASE1:Hg19::chr17:71046459..71046462,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:71046459..71046462,- | |||
|id=chr17:71046459..71046462,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.48e-40;1!UBERON:0003056;1.60e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;4.66e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.70e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.49e-10!115;UBERON:0001017!3.08e-09!82;UBERON:0001049!3.78e-09!57;UBERON:0005068!3.78e-09!57;UBERON:0006241!3.78e-09!57;UBERON:0007135!3.78e-09!57;UBERON:0000073!4.18e-09!94;UBERON:0001016!4.18e-09!94;UBERON:0005743!5.24e-09!86;UBERON:0000955!6.90e-09!69;UBERON:0006238!6.90e-09!69;UBERON:0002298!1.55e-07!8;UBERON:0002616!6.81e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.48e-40;1!UBERON:0000941;1.48e-40;1!UBERON:0001785;1.48e-40;1!UBERON:0002464;1.48e-40;1!UBERON:0004904;1.48e-40;1!UBERON:0001021;1.48e-40;1!UBERON:0009661;1.48e-40;1!UBERON:0002950;1.48e-40;1!UBERON:0001891;1.48e-40;1!UBERON:0001897;4.66e-21;2!UBERON:0003714;4.66e-21;2!UBERON:0005162;4.66e-21;2!UBERON:0000122;4.66e-21;2!UBERON:0010225;4.66e-21;2!UBERON:0002784;3.10e-11;4!UBERON:0001894;5.70e-07;7!UBERON:0009663;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.91e-41,1;UBERON:0001785,9.91e-41,1;UBERON:0002464,9.91e-41,1;UBERON:0004904,9.91e-41,1;UBERON:0001021,9.91e-41,1;UBERON:0003902,9.91e-41,1;UBERON:0005425,9.91e-41,1;UBERON:0002038,1.48e-40,1;UBERON:0009661,1.48e-40,1;UBERON:0002950,1.48e-40,1;UBERON:0001891,1.48e-40,1;UBERON:0009616,1.48e-40,1;UBERON:0010286,1.48e-40,1;UBERON:0001897,3.11e-21,2;UBERON:0010225,3.11e-21,2;UBERON:0003714,3.81e-21,2;UBERON:0005162,3.81e-21,2;UBERON:0000122,3.81e-21,2;UBERON:0002784,2.53e-11,4;UBERON:0001781,2.80e-11,4;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0001894,5.08e-07,7;UBERON:0006222,5.08e-07,7;UBERON:0009663,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.393553906568396,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.445641827540694,0,0,0,0.128091319725675,0,0.657751618414705,0.276350017785848,0,0,0,1.04535523804977,0,0,0.68725489096526,0,0,0.651083453856419,0,0,0,0,0.236777252044017,0.821127996921047,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0.880484340132261,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0.637938751653163,0.749007023947182,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.185803175125719,0.28853842595289,0.0711418433484141,0.159426272728822,0.399158742865633,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0.481764225311099,0.605399121573143,0.851692475380653,0.343505344755765,0.614481528616916,0,0,0.586164286206121,0,0,0,0.33307196799782,0,0,0.439524537815682,0,0.222886768554957,0,0,0,0,0,0,0.222617410045812,0,0.63337622438398,0,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0.221158519862449,0,0,0,0.139423744278603,0,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0,0,0,0.247127877893006,0.104421949505455,0.269604531922708,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0.171986032471617,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0.176512253383001,0,0,0,0.189932387867636,0.391102765469606,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0.121499113316049,0.335434687599266,0,0.157363764404994,0,0.179287339332845,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.258565912723101,0.79339561045614,0,0,0,0,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.554645257684261,0.558867626472451,0.138348634936231,0.249960815924213,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0,0,0.414775308455192,0.584580926518165,0,0.163565394255844,0,0,0,0.19998739585493,0.853533837553127,0,0,0,0,0,0.511577485214607,0.107824811396682,0,0,0.169732529954025,0.212574920101683,0.247871528518004,0,0,0,0.80057074828547,0,0.3062454773532,0.321146125482298,0,0.159633859057151,0.41023272848151,0.504143392443436,0.276629009856872,0.645902582527404,1.42769420259154,0.0981477185010256,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,0,0.496211178389294,0.175871244359621,0.127762427639595,0,0.672567444437648,0,0,0.177404740325278,0,0,0.339848664884159,0.263091094251396,0,0.222462803784138,0.156986185701028,0.157115589916002,0,0,0,0,0.285906176706625,0.316027223465453,0,0.347716544605159,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0.111855431797792,0,1.09726132484042,0,0,0,0,0,0,0.237840181555137,0.11294608203896,0.219881033490858,0,0,0.218559560503957,0,0.490296643507811,0.235676547101626,0.392616934229891,0.594092800654172,0,0,0,0,0.599646935549574,0,0,0,0,0,1.29005624836306,0,0.339957450954573,0,0,0,0,0,0.126166424835079,0.218531143927391,0,0.101988829741982,0,0,0,0.303114792872958,0.535928260312357,0,1.44806194206653,0,0.23806443146374,0.0645889098360061,0,0,0,0.4042343779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| |||
|short_description=p@chr17:71046459..71046462,- | |||
}} |
Revision as of 17:08, 20 January 2014
Short description: | p@chr17:71046459..71046462, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:71046459..71046462, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.91e-41 | 1 |
cranial nerve | 9.91e-41 | 1 |
nerve trunk | 9.91e-41 | 1 |
nerve connecting eye with brain | 9.91e-41 | 1 |
nerve | 9.91e-41 | 1 |
retinal neural layer | 9.91e-41 | 1 |
presumptive neural retina | 9.91e-41 | 1 |
substantia nigra | 1.48e-40 | 1 |
midbrain nucleus | 1.48e-40 | 1 |
regional part of midbrain | 1.48e-40 | 1 |
midbrain | 1.48e-40 | 1 |
presumptive midbrain | 1.48e-40 | 1 |
midbrain neural tube | 1.48e-40 | 1 |
dorsal plus ventral thalamus | 3.11e-21 | 2 |
thalamic complex | 3.11e-21 | 2 |
neural tissue | 3.81e-21 | 2 |
multi cell component structure | 3.81e-21 | 2 |
neuron projection bundle | 3.81e-21 | 2 |
regional part of diencephalon | 2.53e-11 | 4 |
layer of retina | 2.80e-11 | 4 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
diencephalon | 5.08e-07 | 7 |
future diencephalon | 5.08e-07 | 7 |
telencephalic nucleus | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.70e-21 | 2 |