FFCP PHASE1:Hg19::chr18:29598534..29598543,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54941 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21150 | |||
|TSSclassifier=strong | |||
|UniProt=Q96EQ8 | |||
|association_with_transcript=89bp_to_NM_017831,uc002kxf.1_5end | |||
|description=CAGE_peak_8_at_RNF125_5end | |||
|id=chr18:29598534..29598543,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.49e-16!53;CL:0000051!3.49e-16!53;CL:0000838!1.74e-15!52;CL:0000738!7.37e-13!140;CL:0000037!3.16e-12!172;CL:0000566!3.16e-12!172;CL:0000988!6.51e-11!182;CL:0000084!6.97e-11!25;CL:0000827!6.97e-11!25;CL:0000791!1.45e-10!18;CL:0000789!1.45e-10!18;CL:0002420!1.45e-10!18;CL:0002419!1.45e-10!18;CL:0000790!1.45e-10!18;CL:0002032!1.53e-09!165;CL:0000837!1.53e-09!165;CL:0002087!2.61e-08!119;CL:0000624!3.82e-08!6;CL:0002031!1.08e-07!124;CL:0002322!5.10e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.18e-21;5!CL:0000784;8.66e-13;3!CL:0000624;3.15e-12;6!CL:0000791;8.62e-11;18!CL:0000789;8.62e-11;18!CL:0002419;8.62e-11;18!CL:0000039;2.78e-10;7!CL:0000586;2.78e-10;7!CL:0000084;8.33e-10;25!CL:0002321;8.79e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.50e-20,5;CL:0000784,2.23e-13,3;CL:0000624,2.60e-12,6;CL:0000791,8.18e-11,18;CL:0000789,8.18e-11,18;CL:0002420,8.18e-11,18;CL:0002419,8.18e-11,18;CL:0000790,8.18e-11,18;CL:0000039,2.71e-10,7;CL:0000586,2.71e-10,7;CL:0000084,8.14e-10,25;CL:0000827,8.14e-10,25 | |||
|ontology_enrichment_development_v019=CL:0000790;8.62e-11;18!UBERON:0009117;3.39e-07;10!UBERON:0005564;3.39e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.35e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.22e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,1.96682138424452,1.15148819429164,0.154816123316076,0,0,0,0,0,1.17440175733939,0,1.00272223735071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.641858054152187,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0,0.400395987036012,0,0.661044872784862,0,1.1384259382189,0.587237189370939,0.382273228125229,0,1.12101712596307,0.526768169550154,2.9506465517075,3.53709686474248,3.49522548299166,0.167186495390678,2.93330039970231,2.36723902867367,1.94826728407911,1.00269411196656,0.589211814949674,0.886135578334485,0.270803863765016,0.640456598628376,1.30059347559878,2.79544437826249,1.38175008892924,1.44901542867526,1.77943875794473,1.60524496853828,1.04535523804977,0.453237370790265,0.766440987203842,1.03088233644789,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0,1.24930726552346,0,0.821127996921047,0.80642697289893,1.33720097891754,1.15859523106239,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0.649094787309367,0,0.132957960518865,1.43094374583205,1.71598473234038,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,1.09776335516636,2.12047629314376,2.44007280025989,1.45125477021519,1.00928340350251,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0.264145302039678,0.414656231081544,0.576479813667846,0.25248486685276,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.560425719967636,0.394061520403854,0.215627574859517,0.77005821767849,0,0,0,0,0,0,0,0.828831026872071,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,1.03384013061444,0.647142602455851,1.28073069364133,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0.411362273086194,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0,0.557409525377156,0.28853842595289,0.213425530045242,0.159426272728822,0.59873811429845,0.5745161103971,0.211673582723883,0,0.280797178113459,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0.37428108081644,0,0.36408156524854,3.00897137549192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.179515288819544,0.54323685961004,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,1.08194319871046,0,0.707660516026713,0.611030144933625,0,0,0.104421949505455,0,0,0.234264445725339,0.547364367646998,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0,0.518440956986236,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0.483781656445426,0.511625219603299,0.164230914106418,0.290967049465258,0.0882561266915003,0,0.137041924646751,0,0,0,0,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0.432164393964449,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,0.482259445395058,1.51293380256957,2.9080823662043,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0,0.211200673038813,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58089305518355,0.121792598380896,0,1.08803560673895,0.2506898940227,0,0.327872630709804,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0.415045904808692,0,0,0.856396000634902,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.327130788511688,0,0,0,0.19998739585493,0,0.688859918643263,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0.135939465953663,0,0,0.222462803784138,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0.294450700845729,0,0,0,2.3196288626764,0,0,0,0.356760272332706,0.22589216407792,0.219881033490858,0,1.23478652972711,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,1.42045243552804,0,2.44773191380756,5.61156551057677,3.58390108185895,1.25353769646188,0,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.186224142887574,0,0.063647158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| |||
|short_description=p8@RNF125 | |||
}} |
Revision as of 18:58, 20 January 2014
Short description: | p8@RNF125 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RNF125_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_NM_017831, uc002kxf.1_5end |
EntrezGene: | RNF125 |
HGNC: | 21150 |
UniProt: | Q96EQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.50e-20 | 5 |
plasmacytoid dendritic cell | 2.23e-13 | 3 |
CD4-positive, alpha-beta T cell | 2.60e-12 | 6 |
mature alpha-beta T cell | 8.18e-11 | 18 |
alpha-beta T cell | 8.18e-11 | 18 |
immature T cell | 8.18e-11 | 18 |
mature T cell | 8.18e-11 | 18 |
immature alpha-beta T cell | 8.18e-11 | 18 |
germ line cell | 2.71e-10 | 7 |
germ cell | 2.71e-10 | 7 |
T cell | 8.14e-10 | 25 |
pro-T cell | 8.14e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
testis | 5.22e-09 | 8 |