FFCP PHASE1:Hg19::chr18:43405501..43405513,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27596 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZMC9 | |||
|association_with_transcript=-31bp_to_ENST00000389474,NM_213602,uc002lbl.1_5end | |||
|description=CAGE_peak_5_at_SIGLEC15_5end | |||
|id=chr18:43405501..43405513,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.40e-10!180;CL:0000548!3.58e-09!679;CL:0000004!3.58e-09!679;CL:0000255!3.58e-09!679;CL:0000012!5.70e-09!682;CL:0000048!7.49e-09!430;CL:0000723!9.22e-09!436;CL:0000034!3.68e-08!444;CL:0002371!4.00e-08!591;CL:0000680!9.25e-08!57;CL:0000056!9.25e-08!57;CL:0000355!9.25e-08!57;CL:0000144!1.12e-07!625;CL:0000183!2.35e-07!59;CL:0000244!7.27e-07!4;CL:0000731!7.27e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.44e-20;6!CL:1000449;2.45e-12;15!CL:1000507;2.97e-12;10!CL:1000494;2.97e-12;10!CL:1000497;7.27e-11;17!CL:0002518;7.27e-11;17!CL:0002681;3.09e-10;12!CL:0002584;3.09e-10;12!CL:0000222;3.31e-09;1!CL:0000228;4.51e-09;1!CL:0002372;4.51e-09;1!CL:0000244;2.77e-08;4!CL:0000731;2.77e-08;4!CL:0002539;3.76e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.86e-20,6;CL:1000449,1.91e-12,15;CL:1000507,2.73e-12,10;CL:1000494,2.73e-12,10;CL:1000497,5.84e-11,17;CL:0002518,5.84e-11,17;CL:0002681,2.81e-10,12;CL:0002584,2.81e-10,12;CL:0000228,4.19e-09,1;CL:0002372,4.19e-09,1;CL:0000244,2.23e-08,4;CL:0000731,2.23e-08,4;CL:0002539,2.75e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.06e-09;1!DOID:3165;3.06e-09;1!DOID:0060121;3.06e-09;1!DOID:2438;3.06e-09;1!DOID:4418;3.06e-09;1!DOID:0060072;1.50e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.06e-09,1;DOID:3165,3.06e-09,1;DOID:0060121,3.06e-09,1;DOID:2438,3.06e-09,1;DOID:4418,3.06e-09,1;DOID:0060072,1.72e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002204!7.97e-13!167;UBERON:0000486!2.98e-07!82;UBERON:0001134!7.48e-07!61;UBERON:0002036!7.48e-07!61;UBERON:0003082!7.48e-07!61;UBERON:0000914!8.43e-07!83;UBERON:0002329!8.43e-07!83;UBERON:0003077!8.43e-07!83;UBERON:0003059!8.43e-07!83;UBERON:0007282!8.43e-07!83;UBERON:0009618!8.43e-07!83;UBERON:0007285!8.43e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.45e-12;15!UBERON:0004819;2.45e-12;15!UBERON:0001285;2.45e-12;15!UBERON:0007684;2.45e-12;15!UBERON:0004211;2.97e-12;10!UBERON:0009773;2.97e-12;10!UBERON:0001231;2.97e-12;10!UBERON:0004810;2.97e-12;10!UBERON:0006554;2.34e-11;30!UBERON:0001008;2.34e-11;30!UBERON:0001225;3.09e-10;12!UBERON:0008987;3.09e-10;12!UBERON:0001851;3.26e-08;15!UBERON:0000353;3.26e-08;15!UBERON:0002113;1.23e-07;24!UBERON:0011143;1.23e-07;24!UBERON:0004237;3.76e-07;10!UBERON:0004695;3.76e-07;10!UBERON:0002111;3.76e-07;10!UBERON:0004178;3.76e-07;10!UBERON:0000365;8.65e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.91e-12,15;UBERON:0009773,1.91e-12,15;UBERON:0001231,1.91e-12,15;UBERON:0001285,1.91e-12,15;UBERON:0007684,1.91e-12,15;UBERON:0004208,1.91e-12,15;UBERON:0004810,2.73e-12,10;UBERON:0006555,1.17e-11,16;UBERON:0004819,1.17e-11,16;UBERON:0001225,2.81e-10,12;UBERON:0008987,2.81e-10,12;UBERON:0001851,3.03e-08,15;UBERON:0000353,3.03e-08,15;UBERON:0004237,2.75e-07,10;UBERON:0004695,2.75e-07,10;UBERON:0002111,2.75e-07,10;UBERON:0004178,2.75e-07,10;UBERON:0002113,4.32e-07,26;UBERON:0003918,4.32e-07,26;UBERON:0011143,4.32e-07,26;UBERON:0005095,4.32e-07,26;UBERON:0007687,4.32e-07,26;UBERON:0006554,4.99e-07,47;UBERON:0000365,7.26e-07,5;UBERON:0001008,7.27e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0.672325146451775,1.80808358407193,1.46062018077475,1.46379839637152,0.861847406537515,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0.671746422719773,0.971680998056939,0,0,0,0,0,0,0.619412741790207,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,1.13477044938228,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0.97364218096405,0.696518949197069,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.98667019366864,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0.491337269247072,0,0,0,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0.738651018262192,3.04205544681009,1.48631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.7333828582095,0.517086863031111,0,0.845302752556,0,0,0,0,0.799266537048298,0,0,0,0.325736184293735,0,0,0,0.871533458600294,0,1.2162378064119,1.00451418286425,0,0,0,2.85273810081437,0.144781306667579,0.61642896765115,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07946785661859,0.887808626565635,0.410635780069046,1.03850885836724,0.813472649219715,0,0,0,0,0.182091168006717,0,0,2.00239876471478,0,0,1.68882606228601,0,0,1.72732732881711,0,2.16757150035082,0.501689773854853,0.254876273045038,0,1.11937377361089,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.308097234229289,0,0,0,0.145016693914229,0.426133137080504,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0.43050537267123,1.68471475667626,1.33029046061003,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0.552567831062295,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,1.89898258075224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.548167698587004,7.7498698564166,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0.887130899937803,0.477890301491107,1.34940933649081,0,0,0.797525143673985,0,0.150257608997218,0,0,0.727394636810238,0.107410557042488,0,0,0.400027764663154,0.343395705182793,0.336749488765919,5.04739592914604,0,0,0,0,0,0,0,0,0,1.06013487567529,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0.655087670040387,0.147856086217045,0,0,0,0,0,0,0,0.879356221798103,0,0,0,0,0,0,0,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0.62041277132864,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,4.52888530700021,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00918676322552,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@SIGLEC15 | |||
}} |
Revision as of 19:12, 20 January 2014
Short description: | p5@SIGLEC15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SIGLEC15_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000389474, NM_213602, uc002lbl.1_5end |
EntrezGene: | SIGLEC15 |
HGNC: | 27596 |
UniProt: | Q6ZMC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.86e-20 | 6 |
epithelial cell of nephron | 1.91e-12 | 15 |
kidney tubule cell | 2.73e-12 | 10 |
nephron tubule epithelial cell | 2.73e-12 | 10 |
kidney cell | 5.84e-11 | 17 |
kidney epithelial cell | 5.84e-11 | 17 |
kidney cortical cell | 2.81e-10 | 12 |
renal cortical epithelial cell | 2.81e-10 | 12 |
multinucleate cell | 4.19e-09 | 1 |
myotube | 4.19e-09 | 1 |
transitional epithelial cell | 2.23e-08 | 4 |
urothelial cell | 2.23e-08 | 4 |
aortic smooth muscle cell | 2.75e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.91e-12 | 15 |
renal tubule | 1.91e-12 | 15 |
nephron tubule | 1.91e-12 | 15 |
nephron | 1.91e-12 | 15 |
uriniferous tubule | 1.91e-12 | 15 |
nephrogenic mesenchyme | 1.91e-12 | 15 |
nephron tubule epithelium | 2.73e-12 | 10 |
excretory tube | 1.17e-11 | 16 |
kidney epithelium | 1.17e-11 | 16 |
cortex of kidney | 2.81e-10 | 12 |
renal parenchyma | 2.81e-10 | 12 |
cortex | 3.03e-08 | 15 |
parenchyma | 3.03e-08 | 15 |
blood vessel smooth muscle | 2.75e-07 | 10 |
arterial system smooth muscle | 2.75e-07 | 10 |
artery smooth muscle tissue | 2.75e-07 | 10 |
aorta smooth muscle tissue | 2.75e-07 | 10 |
kidney | 4.32e-07 | 26 |
kidney mesenchyme | 4.32e-07 | 26 |
upper urinary tract | 4.32e-07 | 26 |
kidney rudiment | 4.32e-07 | 26 |
kidney field | 4.32e-07 | 26 |
urinary system structure | 4.99e-07 | 47 |
urothelium | 7.26e-07 | 5 |
renal system | 7.27e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.06e-09 | 1 |
skin benign neoplasm | 3.06e-09 | 1 |
integumentary system benign neoplasm | 3.06e-09 | 1 |
dermis tumor | 3.06e-09 | 1 |
cutaneous fibrous histiocytoma | 3.06e-09 | 1 |
benign neoplasm | 1.72e-08 | 4 |