FFCP PHASE1:Hg19::chr2:11696330..11696373,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9687 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24885 | |||
|TSSclassifier=strong | |||
|UniProt=Q4ZG55 | |||
|association_with_transcript=-105bp_to_ENST00000234142_5end | |||
|coexpression_cluster_id=C337 | |||
|description=CAGE_peak_23_at_GREB1_5end | |||
|id=chr2:11696330..11696373,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.00e-40;10!UBERON:0005564;2.00e-40;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.09e-32!57;UBERON:0005068!1.09e-32!57;UBERON:0006241!1.09e-32!57;UBERON:0007135!1.09e-32!57;UBERON:0007023!3.19e-32!115;UBERON:0002616!6.15e-28!59;UBERON:0000955!8.39e-26!69;UBERON:0006238!8.39e-26!69;UBERON:0002780!9.28e-25!41;UBERON:0001890!9.28e-25!41;UBERON:0006240!9.28e-25!41;UBERON:0003080!4.07e-24!42;UBERON:0001017!8.44e-24!82;UBERON:0005743!1.58e-22!86;UBERON:0000073!2.35e-22!94;UBERON:0001016!2.35e-22!94;UBERON:0001893!5.24e-22!34;UBERON:0002020!5.34e-22!34;UBERON:0003528!5.34e-22!34;UBERON:0001950!2.80e-21!20;UBERON:0003075!1.87e-20!86;UBERON:0007284!1.87e-20!86;UBERON:0001869!1.50e-19!32;UBERON:0002346!2.22e-19!90;UBERON:0002619!2.66e-19!22;UBERON:0002791!4.73e-19!33;UBERON:0002298!3.51e-18!8;UBERON:0000956!6.61e-17!25;UBERON:0000203!6.61e-17!25;UBERON:0003056!7.52e-16!61;UBERON:0000033!1.42e-14!123;UBERON:0000153!1.02e-13!129;UBERON:0007811!1.02e-13!129;UBERON:0002021!1.55e-11!5;UBERON:0004121!1.07e-10!169;UBERON:0000924!2.34e-10!173;UBERON:0006601!2.34e-10!173;UBERON:0003076!1.29e-09!15;UBERON:0003057!1.29e-09!15;UBERON:0000200!1.89e-09!6;UBERON:0006331!5.62e-09!3;UBERON:0002771!6.33e-09!3;UBERON:0001896!9.40e-09!3;UBERON:0005290!9.40e-09!3;UBERON:0010096!9.40e-09!3;UBERON:0000988!1.50e-08!3;UBERON:0004733!7.02e-08!12;UBERON:0002028!7.02e-08!12;UBERON:0007277!7.02e-08!12;UBERON:0002038!1.36e-07!1;UBERON:0009661!1.36e-07!1;UBERON:0001882!2.23e-07!1;UBERON:0005403!2.23e-07!1;UBERON:0003112!2.52e-07!1;UBERON:0000032!2.52e-07!1;UBERON:0005253!2.52e-07!1;UBERON:0003128!2.52e-07!1;UBERON:0002241!2.52e-07!1;UBERON:0001703!2.52e-07!1;UBERON:0004761!2.52e-07!1;UBERON:0009617!2.52e-07!1;UBERON:0004732!2.79e-07!13;UBERON:0001871!3.31e-07!7;UBERON:0002902!3.41e-07!1;UBERON:0009899!3.41e-07!1;UBERON:0007190!3.85e-07!1;UBERON:0006834!4.60e-07!1;UBERON:0000025!5.91e-07!194;UBERON:0002022!7.40e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000991;4.86e-20;21!UBERON:0000473;1.07e-13;8!UBERON:0003135;2.37e-10;11!UBERON:0000992;5.28e-09;13!UBERON:0002323;3.39e-07;45!UBERON:0002553;3.40e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,4.86e-20,21;UBERON:0009196,4.86e-20,21;UBERON:0009117,4.86e-20,21;UBERON:0005564,4.86e-20,21;UBERON:0004176,3.41e-19,22;UBERON:0000473,1.07e-13,8;UBERON:0003135,2.37e-10,11;UBERON:0002323,7.07e-10,46;UBERON:0003133,1.62e-09,48;UBERON:0004458,2.38e-09,49;UBERON:0000992,5.28e-09,13;UBERON:0003886,1.34e-08,54;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59;UBERON:0002553,9.44e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,3.00841313397029,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.151557396436479,1.07185652062471,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p23@GREB1 | |||
}} |
Revision as of 01:45, 21 January 2014
Short description: | p23@GREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_GREB1_5end |
Coexpression cluster: | C337_ovary_testis_Adipocyte_mesothelioma_chorionic_placenta_spleen |
Association with transcript: | -105bp_to_ENST00000234142_5end |
EntrezGene: | GREB1 |
HGNC: | 24885 |
UniProt: | Q4ZG55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 4.86e-20 | 21 |
indifferent external genitalia | 4.86e-20 | 21 |
indifferent gonad | 4.86e-20 | 21 |
gonad primordium | 4.86e-20 | 21 |
external genitalia | 3.41e-19 | 22 |
testis | 1.07e-13 | 8 |
male reproductive organ | 2.37e-10 | 11 |
body cavity | 7.07e-10 | 46 |
reproductive organ | 1.62e-09 | 48 |
body cavity or lining | 2.38e-09 | 49 |
female gonad | 5.28e-09 | 13 |
body cavity precursor | 1.34e-08 | 54 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |
anatomical cavity | 9.44e-08 | 61 |