FFCP PHASE1:Hg19::chr2:27886432..27886452,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9913 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30632 | |||
|TSSclassifier=strong | |||
|UniProt=O94864 | |||
|association_with_transcript=0bp_to_NM_014860,uc002rlh.1,uc002rli.1,uc002rlj.1,uc010ezh.1,uc010ymf.1_5end | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_2_at_SUPT7L_5end | |||
|id=chr2:27886432..27886452,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.50e-19!94;UBERON:0001016!3.50e-19!94;UBERON:0005743!1.37e-17!86;UBERON:0001017!2.00e-17!82;UBERON:0000955!9.41e-16!69;UBERON:0006238!9.41e-16!69;UBERON:0001049!1.16e-15!57;UBERON:0005068!1.16e-15!57;UBERON:0006241!1.16e-15!57;UBERON:0007135!1.16e-15!57;UBERON:0002346!3.24e-15!90;UBERON:0003075!1.50e-14!86;UBERON:0007284!1.50e-14!86;UBERON:0002616!1.58e-14!59;UBERON:0002780!1.34e-12!41;UBERON:0001890!1.34e-12!41;UBERON:0006240!1.34e-12!41;UBERON:0003080!4.97e-12!42;UBERON:0003056!1.12e-11!61;UBERON:0001869!2.54e-11!32;UBERON:0000924!7.58e-11!173;UBERON:0006601!7.58e-11!173;UBERON:0001893!1.01e-10!34;UBERON:0002020!1.53e-10!34;UBERON:0003528!1.53e-10!34;UBERON:0004121!2.93e-10!169;UBERON:0002791!3.16e-10!33;UBERON:0000475!8.25e-10!365;UBERON:0000956!3.25e-09!25;UBERON:0000203!3.25e-09!25;UBERON:0002619!3.64e-09!22;UBERON:0001950!3.85e-09!20;UBERON:0000033!2.14e-08!123;UBERON:0000153!1.87e-07!129;UBERON:0007811!1.87e-07!129;UBERON:0000025!6.91e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.36e-10;32!UBERON:0003528;1.58e-09;34!UBERON:0002020;1.58e-09;34!UBERON:0001893;1.74e-09;34!UBERON:0001950;3.28e-09;20!UBERON:0002619;4.46e-09;22!UBERON:0002791;4.49e-09;32!UBERON:0000956;6.08e-09;25!UBERON:0000203;6.08e-09;25!UBERON:0000073;6.72e-09;53!UBERON:0002616;6.72e-09;53!UBERON:0002780;9.02e-09;41!UBERON:0001890;9.02e-09;41!UBERON:0001017;2.45e-08;75!UBERON:0000955;4.19e-08;68!UBERON:0001016;2.19e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.91e-19,89;UBERON:0001017,7.19e-18,81;UBERON:0001049,3.15e-16,56;UBERON:0005068,3.15e-16,56;UBERON:0006241,3.15e-16,56;UBERON:0007135,3.15e-16,56;UBERON:0000955,3.23e-16,68;UBERON:0006238,3.23e-16,68;UBERON:0000073,1.05e-15,53;UBERON:0002616,1.05e-15,53;UBERON:0002346,9.41e-15,86;UBERON:0003075,4.30e-14,82;UBERON:0007284,4.30e-14,82;UBERON:0010371,4.35e-13,104;UBERON:0002780,1.33e-12,41;UBERON:0001890,1.33e-12,41;UBERON:0003080,1.33e-12,41;UBERON:0006240,1.33e-12,41;UBERON:0003056,2.29e-11,61;UBERON:0001869,2.54e-11,32;UBERON:0001893,1.01e-10,34;UBERON:0004121,1.31e-10,171;UBERON:0000924,1.31e-10,171;UBERON:0006601,1.31e-10,171;UBERON:0003528,1.53e-10,34;UBERON:0002020,1.53e-10,34;UBERON:0002791,5.43e-10,32;UBERON:0000956,3.25e-09,25;UBERON:0000203,3.25e-09,25;UBERON:0002619,3.64e-09,22;UBERON:0001950,3.85e-09,20;UBERON:0010314,1.16e-08,132;UBERON:0000025,5.24e-07,192 | |||
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| |||
|short_description=p2@SUPT7L | |||
}} |
Revision as of 02:18, 21 January 2014
Short description: | p2@SUPT7L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SUPT7L_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_NM_014860, uc002rlh.1, uc002rli.1, uc002rlj.1, uc010ezh.1, uc010ymf.1_5end |
EntrezGene: | SUPT7L |
HGNC: | 30632 |
UniProt: | O94864 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.91e-19 | 89 |
central nervous system | 7.19e-18 | 81 |
neural tube | 3.15e-16 | 56 |
neural rod | 3.15e-16 | 56 |
future spinal cord | 3.15e-16 | 56 |
neural keel | 3.15e-16 | 56 |
brain | 3.23e-16 | 68 |
future brain | 3.23e-16 | 68 |
regional part of nervous system | 1.05e-15 | 53 |
regional part of brain | 1.05e-15 | 53 |
neurectoderm | 9.41e-15 | 86 |
neural plate | 4.30e-14 | 82 |
presumptive neural plate | 4.30e-14 | 82 |
ecto-epithelium | 4.35e-13 | 104 |
regional part of forebrain | 1.33e-12 | 41 |
forebrain | 1.33e-12 | 41 |
anterior neural tube | 1.33e-12 | 41 |
future forebrain | 1.33e-12 | 41 |
pre-chordal neural plate | 2.29e-11 | 61 |
cerebral hemisphere | 2.54e-11 | 32 |
telencephalon | 1.01e-10 | 34 |
ectoderm-derived structure | 1.31e-10 | 171 |
ectoderm | 1.31e-10 | 171 |
presumptive ectoderm | 1.31e-10 | 171 |
brain grey matter | 1.53e-10 | 34 |
gray matter | 1.53e-10 | 34 |
regional part of telencephalon | 5.43e-10 | 32 |
cerebral cortex | 3.25e-09 | 25 |
pallium | 3.25e-09 | 25 |
regional part of cerebral cortex | 3.64e-09 | 22 |
neocortex | 3.85e-09 | 20 |
structure with developmental contribution from neural crest | 1.16e-08 | 132 |
tube | 5.24e-07 | 192 |