FFCP PHASE1:Hg19::chr2:201171268..201171284,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26010 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24574 | |||
|TSSclassifier=strong | |||
|UniProt=F2Z2S1,Q4ZFW0,F8VT91 | |||
|association_with_transcript=0bp_to_ENST00000423749,ENST00000428692,ENST00000457757,ENST00000471601_5end | |||
|description=CAGE_peak_2_at_SPATS2L_5end | |||
|id=chr2:201171268..201171284,+ | |||
|ontology_enrichment_celltype=CL:0000223!1.92e-09!59;CL:0000066!6.93e-08!254;CL:0000220!9.02e-08!246;CL:0002321!1.17e-07!248 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,9.31e-10,58;CL:0000066,5.97e-08,253;CL:0002321,1.46e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.13e-24!365;UBERON:0000481!5.92e-21!347;UBERON:0000468!1.46e-16!659;UBERON:0000062!3.01e-16!511;UBERON:0000467!4.15e-16!625;UBERON:0000480!7.66e-16!626;UBERON:0004119!1.34e-14!169;UBERON:0000925!1.34e-14!169;UBERON:0006595!1.34e-14!169;UBERON:0001007!9.35e-14!155;UBERON:0001555!9.35e-14!155;UBERON:0007026!9.35e-14!155;UBERON:0004111!3.15e-13!241;UBERON:0000477!4.02e-13!286;UBERON:0000119!7.91e-13!312;UBERON:0000483!1.91e-12!309;UBERON:0003104!7.04e-12!238;UBERON:0009142!7.04e-12!238;UBERON:0000922!1.90e-11!612;UBERON:0002050!4.63e-11!605;UBERON:0005423!4.63e-11!605;UBERON:0000923!6.47e-11!604;UBERON:0005291!6.47e-11!604;UBERON:0006598!6.47e-11!604;UBERON:0002532!6.47e-11!604;UBERON:0000033!1.32e-10!123;UBERON:0000153!1.94e-10!129;UBERON:0007811!1.94e-10!129;UBERON:0005911!3.09e-10!82;UBERON:0002100!3.25e-10!216;UBERON:0003102!6.90e-10!95;UBERON:0000077!1.75e-09!130;UBERON:0004921!2.53e-09!129;UBERON:0004185!2.53e-09!129;UBERON:0000161!5.52e-09!35;UBERON:0004121!1.02e-08!169;UBERON:0005256!1.86e-08!143;UBERON:0000025!5.38e-08!194;UBERON:0000924!9.27e-08!173;UBERON:0006601!9.27e-08!173;UBERON:0003929!9.69e-08!54;UBERON:0000064!1.07e-07!219;UBERON:0000955!6.80e-07!69;UBERON:0006238!6.80e-07!69;UBERON:0001950!8.64e-07!20;UBERON:0002619!9.26e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.15e-07;20!UBERON:0002619;7.92e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.28e-16,223;UBERON:0004119,2.99e-13,160;UBERON:0000925,2.99e-13,160;UBERON:0006595,2.99e-13,160;UBERON:0004111,3.78e-13,240;UBERON:0001007,1.51e-12,145;UBERON:0001555,1.51e-12,145;UBERON:0007026,1.51e-12,145;UBERON:0000119,1.69e-12,309;UBERON:0000483,4.03e-12,306;UBERON:0003102,1.72e-10,99;UBERON:0005911,3.48e-10,82;UBERON:0000922,2.36e-09,592;UBERON:0000161,3.32e-09,36;UBERON:0002100,1.80e-08,199;UBERON:0002050,3.12e-08,564;UBERON:0005423,3.38e-08,581;UBERON:0004921,4.55e-08,118;UBERON:0000025,8.99e-08,192;UBERON:0003929,1.00e-07,54;UBERON:0004121,1.01e-07,171;UBERON:0000924,1.01e-07,171;UBERON:0006601,1.01e-07,171;UBERON:0000923,1.61e-07,560;UBERON:0010316,1.61e-07,560;UBERON:0005291,1.61e-07,560;UBERON:0006598,1.61e-07,560;UBERON:0010317,1.61e-07,560;UBERON:0002532,1.61e-07,560;UBERON:0003104,4.17e-07,160;UBERON:0009142,4.17e-07,160;UBERON:0005256,7.06e-07,122;UBERON:0001950,8.43e-07,20;UBERON:0002619,9.04e-07,22 | |||
|phase1_expression=3.45188920614058,2.78330681058278,4.36958652697511,8.00586386825043,5.36353313312745,5.23403114460221,7.59899634504932,3.79031924056099,6.52964070499596,17.9385773646101,17.4450291993107,5.02415155899396,5.27533956456907,2.97039247104112,6.62794751455832,13.4465029290355,5.42425075221579,13.1455816269727,10.2465887746006,6.40229501999297,3.26401105990805,7.20945859399602,3.72106783270374,6.43309797842556,3.26410862946487,4.58480434487708,5.00813595644669,5.50975469195755,0.786728553697808,0.383829398097213,1.23852898652861,9.19421224478927,13.5542663450213,2.9580320813343,0,0,0.880801318004542,1.10799081706375,0.200544447470142,0.217010870715852,5.59788685599811,4.53451132426571,6.18181362322048,1.89017710413434,0.377875943688809,0.970336244751265,0.929716147622738,0.822335776043652,0,1.43846196161075,0.768482119587302,1.41889337933151,2.06847408441971,1.93645405075148,0,0.752969358170419,0.818718450173537,1.34834090667051,3.36692281607993,2.88836124368484,1.27867425159808,3.95821560224059,4.18873681005427,2.55734850319616,1.7412554317715,1.70215567407342,1.86846674698672,2.00998932205395,2.60741459210101,1.08594422352558,3.63239701580021,2.20966581592539,2.21523671208619,0.422510572623884,0.425208599930087,0.628975936525128,0,0.901061357049038,0.64290234678832,0.855038231223746,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,1.12101712596307,1.05353633910031,0.590129310341499,0,0,4.17966238476695,0.977766799900771,1.4203434172042,0,3.89936599098108,2.65145316727353,3.1014745241707,2.16643091012012,8.45402710189456,5.85267064019452,2.63100647365882,1.10540007114339,0.289803085735052,0.14828656316206,0,0,2.15287751125376,1.91610246800961,0.34362744548263,0.759059076058509,0.637130828648193,0,0.950452044448374,1.35517607169996,1.91979916731628,3.74792179657038,0.473554504088034,0.821127996921047,0.80642697289893,0.534880391567015,0.434473211648397,4.87613732627923,11.4019146149618,11.3797680040742,7.95166135246046,8.52274448081012,4.05570253090306,4.7717156823066,3.40644409211845,6.99557647014102,11.5299286680533,8.60780899792635,6.15601654839249,6.19301990097322,3.33705998505986,4.21911611751088,6.44280028007289,5.85015026283007,1.19245312152671,3.43196946468077,0.74291500265913,5.76410981363445,4.30117297553062,5.55424802572151,5.08777147731609,5.45349267072878,7.42818713238182,7.31482382878837,7.23566925674121,4.62496141492723,4.35136796594071,4.43112248820062,3.80136052859256,1.70843440283719,7.35326160691737,3.24056779152704,3.92918804449951,3.14341121676638,9.79719880204903,4.5994991239765,2.84779697870439,3.48083313467774,0,0,3.48875241714027,4.47274756525787,8.86413581652058,17.8752394097845,14.0549944166919,16.6694139633228,6.72813120170769,6.4049397437823,2.96001058100592,6.53543174339509,6.19669091520565,7.84617134944602,5.60022482286246,2.88087962239999,2.34321431833797,3.43376084513353,7.41613368007784,2.54062756938062,8.80758739828237,9.38863077335163,11.3765153428821,6.94124182266637,6.01888154827663,7.12947890112782,26.1360628602052,16.8141511909419,11.8320977051943,1.43723628363248,6.39677233025452,10.2597186295011,12.4678851967882,26.7776348737311,9.50112166976961,18.1788051276982,6.35220225696118,19.3740806543971,14.7354598284812,10.8085269591377,19.2058301494017,16.7975622658655,18.5501188832853,11.9114788052217,17.8902912175742,8.96420447483027,17.1654966485998,13.8995346949872,8.24394889775941,16.3304412557643,15.112814734146,10.5127567232502,23.3845632327589,15.8192749942684,36.7109882097925,7.80631719229411,3.31324420803713,4.53156377191122,7.67091807113741,5.55105871926382,1.82488679537915,14.0804579096834,5.78916844373597,2.76269842704961,11.6091982007995,4.33127689001751,2.9576700009961,5.90046415273356,6.26628677697053,3.52940712743661,4.57546832594053,3.32178866755535,3.7752766284846,4.90553662813365,3.07797725557112,10.3341763647451,7.01208869017229,10.289350283285,5.88034845542168,6.33775174109154,6.87979051674338,9.45263850690247,0,14.6356241866305,9.77936518701596,4.93876284338815,4.49607013030478,5.5290934826397,4.62942225792648,2.93227474779292,7.27954349695705,7.21656710126366,6.83989389352953,13.854225919827,1.87676382089396,1.85194205030644,1.52203321787679,9.4824527755113,6.00940313466411,4.43190610957315,5.6161023633417,5.35072184239422,10.3107217385455,13.9425166405053,20.6991641973884,9.22452783839337,7.26584846284905,6.13412286664338,7.8826118063351,8.27655279724325,20.1108272074549,14.2678753882792,24.1123047844386,7.74674310364462,3.4378958300245,3.51652341630141,0,9.46012932870576,1.50171528921959,6.00235508524214,9.08261783197422,10.899001720832,9.02060915597685,6.46358578788889,0,4.22651376278,4.5209479819428,6.24044621468197,6.68739173081569,17.0218958427934,6.39413229638638,2.7165818795048,3.25572963234866,3.29296134712308,6.5147236858747,4.26470338491055,7.12756685640086,15.3734082300389,7.84380112740265,9.59740715347748,0,5.52482800575339,8.43335757932127,11.9812427745791,16.0806710167759,31.380119108958,6.949502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| |||
|short_description=p2@SPATS2L | |||
}} |
Revision as of 07:49, 21 January 2014
Short description: | p2@SPATS2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPATS2L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000423749, ENST00000428692, ENST00000457757, ENST00000471601_5end |
EntrezGene: | SPATS2L |
HGNC: | 24574 |
UniProt: | F2Z2S1Q4ZFW0F8VT91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 9.31e-10 | 58 |
epithelial cell | 5.97e-08 | 253 |
embryonic cell | 1.46e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.28e-16 | 223 |
endoderm-derived structure | 2.99e-13 | 160 |
endoderm | 2.99e-13 | 160 |
presumptive endoderm | 2.99e-13 | 160 |
anatomical conduit | 3.78e-13 | 240 |
digestive system | 1.51e-12 | 145 |
digestive tract | 1.51e-12 | 145 |
primitive gut | 1.51e-12 | 145 |
cell layer | 1.69e-12 | 309 |
epithelium | 4.03e-12 | 306 |
surface structure | 1.72e-10 | 99 |
endo-epithelium | 3.48e-10 | 82 |
embryo | 2.36e-09 | 592 |
orifice | 3.32e-09 | 36 |
trunk | 1.80e-08 | 199 |
embryonic structure | 3.12e-08 | 564 |
developing anatomical structure | 3.38e-08 | 581 |
subdivision of digestive tract | 4.55e-08 | 118 |
tube | 8.99e-08 | 192 |
gut epithelium | 1.00e-07 | 54 |
ectoderm-derived structure | 1.01e-07 | 171 |
ectoderm | 1.01e-07 | 171 |
presumptive ectoderm | 1.01e-07 | 171 |
germ layer | 1.61e-07 | 560 |
germ layer / neural crest | 1.61e-07 | 560 |
embryonic tissue | 1.61e-07 | 560 |
presumptive structure | 1.61e-07 | 560 |
germ layer / neural crest derived structure | 1.61e-07 | 560 |
epiblast (generic) | 1.61e-07 | 560 |
mesenchyme | 4.17e-07 | 160 |
entire embryonic mesenchyme | 4.17e-07 | 160 |
trunk mesenchyme | 7.06e-07 | 122 |
neocortex | 8.43e-07 | 20 |
regional part of cerebral cortex | 9.04e-07 | 22 |