FFCP PHASE1:Hg19::chr2:202938048..202938058,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100652824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=36bp_to_ENST00000409515,ENST00000459709_5end | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_5_at_LOC100652824_5end | |||
|id=chr2:202938048..202938058,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;8.10e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.59e-30!115;UBERON:0001049!2.60e-29!57;UBERON:0005068!2.60e-29!57;UBERON:0006241!2.60e-29!57;UBERON:0007135!2.60e-29!57;UBERON:0002298!1.36e-26!8;UBERON:0002616!6.41e-25!59;UBERON:0003076!2.27e-24!15;UBERON:0003057!2.27e-24!15;UBERON:0004733!1.57e-23!12;UBERON:0002028!1.57e-23!12;UBERON:0007277!1.57e-23!12;UBERON:0000955!4.02e-23!69;UBERON:0006238!4.02e-23!69;UBERON:0004732!1.17e-21!13;UBERON:0001017!2.17e-21!82;UBERON:0005743!3.10e-20!86;UBERON:0001896!3.90e-19!3;UBERON:0005290!3.90e-19!3;UBERON:0010096!3.90e-19!3;UBERON:0000988!2.83e-18!3;UBERON:0003075!2.85e-18!86;UBERON:0007284!2.85e-18!86;UBERON:0000073!5.50e-18!94;UBERON:0001016!5.50e-18!94;UBERON:0002346!2.66e-17!90;UBERON:0002308!8.30e-17!9;UBERON:0000125!8.30e-17!9;UBERON:0000369!1.81e-14!4;UBERON:0002435!1.81e-14!4;UBERON:0000204!1.81e-14!4;UBERON:0010082!1.81e-14!4;UBERON:0000153!7.86e-14!129;UBERON:0007811!7.86e-14!129;UBERON:0001873!2.12e-13!2;UBERON:0010122!2.12e-13!2;UBERON:0003127!2.40e-13!2;UBERON:0002148!4.68e-13!2;UBERON:0009662!4.68e-13!2;UBERON:0000341!4.97e-13!2;UBERON:0002780!2.62e-12!41;UBERON:0001890!2.62e-12!41;UBERON:0006240!2.62e-12!41;UBERON:0002020!3.00e-12!34;UBERON:0003528!3.00e-12!34;UBERON:0001893!3.36e-12!34;UBERON:0003080!5.56e-12!42;UBERON:0000033!1.67e-11!123;UBERON:0002680!1.41e-10!9;UBERON:0001895!1.41e-10!9;UBERON:0010092!1.41e-10!9;UBERON:0001869!3.19e-10!32;UBERON:0000025!3.77e-10!194;UBERON:0002791!4.89e-10!33;UBERON:0005383!3.21e-09!3;UBERON:0005382!3.21e-09!3;UBERON:0006331!5.40e-09!3;UBERON:0009663!1.81e-08!7;UBERON:0004121!2.01e-08!169;UBERON:0000924!3.83e-08!173;UBERON:0006601!3.83e-08!173;UBERON:0003056!8.86e-08!61;UBERON:0002336!1.27e-07!1;UBERON:0001018!1.27e-07!1;UBERON:0002473!1.27e-07!1;UBERON:0005340!1.27e-07!1;UBERON:0002316!1.27e-07!1;UBERON:0003544!1.27e-07!1;UBERON:0001020!1.27e-07!1;UBERON:0005970!1.27e-07!1;UBERON:0002437!1.27e-07!1;UBERON:0001882!1.97e-07!1;UBERON:0005403!1.97e-07!1;UBERON:0004111!2.64e-07!241;UBERON:0006834!3.21e-07!1;UBERON:0001301!3.85e-07!1;UBERON:0002022!4.89e-07!1;UBERON:0007190!6.57e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;4.90e-26;2!UBERON:0001873;8.10e-26;2!UBERON:0001896;7.35e-18;3!UBERON:0005290;7.35e-18;3!UBERON:0005383;1.03e-17;3!UBERON:0005382;1.03e-17;3!UBERON:0000369;1.21e-13;4!UBERON:0002435;1.21e-13;4!UBERON:0000204;1.21e-13;4!UBERON:0002298;1.27e-09;6!UBERON:0003126;1.96e-08;7!UBERON:0001005;1.96e-08;7!UBERON:0009663;2.26e-08;7!UBERON:0002420;8.61e-07;9!UBERON:0000125;8.61e-07;9!UBERON:0007245;8.61e-07;9!UBERON:0002308;8.61e-07;9!UBERON:0010009;8.61e-07;9!UBERON:0010011;8.61e-07;9!UBERON:0000454;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,5.56e-26,2;UBERON:0001873,7.14e-26,2;UBERON:0010122,7.14e-26,2;UBERON:0001896,6.76e-18,3;UBERON:0005290,6.76e-18,3;UBERON:0010096,6.76e-18,3;UBERON:0005383,9.46e-18,3;UBERON:0005382,9.46e-18,3;UBERON:0000369,1.13e-13,4;UBERON:0002435,1.13e-13,4;UBERON:0000204,1.13e-13,4;UBERON:0010082,1.13e-13,4;UBERON:0002298,1.22e-09,6;UBERON:0003126,2.03e-08,7;UBERON:0001005,2.03e-08,7;UBERON:0009663,2.18e-08,7;UBERON:0007023,8.86e-08,114;UBERON:0002420,8.37e-07,9;UBERON:0000125,8.37e-07,9;UBERON:0007245,8.37e-07,9;UBERON:0002308,8.37e-07,9;UBERON:0010009,8.37e-07,9;UBERON:0010011,8.37e-07,9;UBERON:0000454,8.37e-07,9 | |||
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|short_description=p5@LOC100652824 | |||
}} |
Revision as of 07:57, 21 January 2014
Short description: | p5@LOC100652824 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LOC100652824_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 36bp_to_ENST00000409515, ENST00000459709_5end |
EntrezGene: | LOC100652824 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 5.56e-26 | 2 |
caudate nucleus | 7.14e-26 | 2 |
future caudate nucleus | 7.14e-26 | 2 |
medulla oblongata | 6.76e-18 | 3 |
myelencephalon | 6.76e-18 | 3 |
future myelencephalon | 6.76e-18 | 3 |
caudate-putamen | 9.46e-18 | 3 |
dorsal striatum | 9.46e-18 | 3 |
corpus striatum | 1.13e-13 | 4 |
striatum | 1.13e-13 | 4 |
ventral part of telencephalon | 1.13e-13 | 4 |
future corpus striatum | 1.13e-13 | 4 |
brainstem | 1.22e-09 | 6 |
trachea | 2.03e-08 | 7 |
respiratory airway | 2.03e-08 | 7 |
telencephalic nucleus | 2.18e-08 | 7 |
adult organism | 8.86e-08 | 114 |
basal ganglion | 8.37e-07 | 9 |
neural nucleus | 8.37e-07 | 9 |
nuclear complex of neuraxis | 8.37e-07 | 9 |
nucleus of brain | 8.37e-07 | 9 |
aggregate regional part of brain | 8.37e-07 | 9 |
collection of basal ganglia | 8.37e-07 | 9 |
cerebral subcortex | 8.37e-07 | 9 |