FFCP PHASE1:Hg19::chr22:39493207..39493223,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=164668 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24100 | |||
|TSSclassifier=strong | |||
|UniProt=E9PF38,Q6NTF7,B7TQM5,B7TQM9,B7TQM3 | |||
|association_with_transcript=-5bp_to_ENST00000348946,ENST00000421988,ENST00000442487,NM_001166002,NM_001166003,NM_001166004,NM_181773_5end | |||
|coexpression_cluster_id=C239 | |||
|description=CAGE_peak_3_at_APOBEC3H_5end | |||
|id=chr22:39493207..39493223,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.19e-36!53;CL:0000051!1.19e-36!53;CL:0000838!2.38e-35!52;CL:0000084!4.23e-19!25;CL:0000827!4.23e-19!25;CL:0000791!2.01e-18!18;CL:0000789!2.01e-18!18;CL:0002420!2.01e-18!18;CL:0002419!2.01e-18!18;CL:0000790!2.01e-18!18;CL:0000738!9.09e-18!140;CL:0002087!1.42e-17!119;CL:0000988!2.20e-17!182;CL:0000037!3.76e-17!172;CL:0000566!3.76e-17!172;CL:0002032!6.08e-17!165;CL:0000837!6.08e-17!165;CL:0000625!1.41e-15!11;CL:0002031!2.14e-15!124;CL:0000945!6.65e-14!24;CL:0000826!6.65e-14!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.02e-19;18!CL:0000789;2.02e-19;18!CL:0002419;2.02e-19;18!CL:0000625;1.78e-18;11!CL:0000084;3.43e-17;25!CL:0000542;2.00e-15;53!CL:0000945;4.96e-08;24!CL:0002127;2.30e-07;1!CL:0000911;2.30e-07;1!CL:0000814;2.30e-07;1!CL:0000946;6.48e-07;1!CL:0000222;6.48e-07;1!CL:0000895;6.48e-07;1!CL:0000786;6.48e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.41e-27,53;CL:0000051,2.41e-27,53;CL:0000838,1.39e-24,52;CL:0000791,2.07e-19,18;CL:0000789,2.07e-19,18;CL:0002420,2.07e-19,18;CL:0002419,2.07e-19,18;CL:0000790,2.07e-19,18;CL:0000625,2.25e-18,11;CL:0000084,4.19e-17,25;CL:0000827,4.19e-17,25;CL:0002031,6.54e-13,120;CL:0000893,9.00e-13,2;CL:0002489,9.00e-13,2;CL:0000809,9.00e-13,2;CL:0000808,9.00e-13,2;CL:0000894,9.00e-13,2;CL:0000806,9.00e-13,2;CL:0000807,9.00e-13,2;CL:0000805,9.00e-13,2;CL:0002425,9.00e-13,2;CL:0000738,2.43e-12,136;CL:0002087,5.19e-12,115;CL:0002032,4.99e-11,161;CL:0000837,4.99e-11,161;CL:0000037,2.17e-10,168;CL:0000988,1.20e-09,177;CL:0000945,6.21e-08,24;CL:0000826,6.21e-08,24;CL:0002127,2.10e-07,1;CL:0000914,2.10e-07,1;CL:0000911,2.10e-07,1;CL:0000814,2.10e-07,1;CL:0002042,2.10e-07,1;CL:0002039,2.10e-07,1;CL:0002040,2.10e-07,1;CL:0002041,2.10e-07,1;CL:0000810,4.85e-07,1;CL:0000895,4.85e-07,1;CL:0002436,4.85e-07,1;CL:0002427,4.85e-07,1;CL:0002428,4.85e-07,1;CL:0002429,4.85e-07,1;CL:0002433,4.85e-07,1;CL:0002431,4.85e-07,1;CL:0002432,4.85e-07,1;CL:0000946,9.73e-07,1;CL:0000786,9.73e-07,1;CL:0000980,9.73e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.02e-19;18!CL:0000051;2.00e-15;53!CL:0002425;1.31e-12;2!CL:0002427;6.48e-07;1 | |||
|ontology_enrichment_disease=DOID:0060058!7.35e-10!10;DOID:2531!4.61e-08!51;DOID:0060083!4.61e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:630;2.30e-07;1!DOID:0050177;2.30e-07;1!DOID:0050427;2.30e-07;1!DOID:12603;6.48e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.52e-07,1;DOID:0050177,2.52e-07,1;DOID:0050427,2.52e-07,1;DOID:12603,5.14e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.45e-07,4;UBERON:0005058,8.45e-07,4;UBERON:0009113,8.45e-07,4;UBERON:0003295,8.45e-07,4;UBERON:0005562,8.45e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.821005894499457,1.10195093839151,0.393364276848904,0,0.619264493264304,0,0,0,0.309868802321207,0.284338464974843,0,1.10799081706375,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,1.09227722252426,0,0,0.400395987036012,0.574752439954483,0,0,0.569212969109448,0,1.14681968437569,0,0,0,0.196709770113833,0,0.411202997999018,3.8452893939856,0,0,0,6.79603786999559,0.589211814949674,1.10766947291811,1.08321545506006,4.35510487067296,5.33243324995501,3.28875809207352,3.86890024900188,2.02862160014537,0,0.267540828089713,0,4.98561107869291,1.53288197440768,0.68725489096526,0.506039384039006,1.27426165729639,0.651083453856419,3.8018081777935,0.602300476311091,1.02389288923535,3.74792179657038,0.947109008176067,3.28451198768419,1.20964045934839,0.267440195783507,0.434473211648397,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0.445893486866185,0,0,0,0.268675568108545,0.581267877027924,0,2.46331618947972,1.84901711427775,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81089489577993,1.97030760201927,0.431255149719035,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0,0.540031437238115,0,0.106824071127473,0,0,1.30062222588003,0.28853842595289,0,0,0,0,0,0,0.280797178113459,0.456469358066384,0,0,0.677167111206413,0,0,0,0,0.307240764308458,0,0.333698283423817,0.19538809540204,0,0,0,0.33307196799782,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0,2.58478091468246,0,0,0,1.53471711068062,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0,0,0,0.269272933229316,0.108647371922008,0.31900115973192,0,0,1.02193298195737,0.31396051279005,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0.313265848516366,0,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0.664653872707185,0,0.313932918407225,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0.407992870545287,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0.677386656526276,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0.496166021811951,0.592834895693833,0.852548188666271,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.490696182767533,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,1.03710588800201,0.171488009437418,0,0.0657727735628491,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0.647428837187895,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799529247399431,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.5388164241167,0,0,0,0,0,0,0,0,0,0,0,3.52625341533556 | |||
|short_description=p3@APOBEC3H | |||
}} |
Revision as of 16:05, 21 January 2014
Short description: | p3@APOBEC3H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_APOBEC3H_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | -5bp_to_ENST00000348946, ENST00000421988, ENST00000442487, NM_001166002, NM_001166003, NM_001166004, NM_181773_5end |
EntrezGene: | APOBEC3H |
HGNC: | 24100 |
UniProt: | E9PF38Q6NTF7B7TQM5B7TQM9B7TQM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.45e-07 | 4 |
hemolymphoid system gland | 8.45e-07 | 4 |
thymic region | 8.45e-07 | 4 |
pharyngeal gland | 8.45e-07 | 4 |
thymus primordium | 8.45e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.52e-07 | 1 |
monogenic disease | 2.52e-07 | 1 |
xeroderma pigmentosum | 2.52e-07 | 1 |
acute leukemia | 5.14e-07 | 1 |