FFCP PHASE1:Hg19::chr4:21449426..21449445,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C264 | |||
|description=CAGE_peak_at_chr4:21449426..21449445,- | |||
|id=chr4:21449426..21449445,- | |||
|ontology_enrichment_celltype=CL:0000066!1.48e-18!254;CL:0002076!3.08e-10!43;CL:0000223!2.73e-08!59;CL:0002231!5.33e-07!3;CL:0000239!7.17e-07!3;CL:1000615!7.17e-07!3;CL:0002306!7.17e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000167;4.44e-18;1!CL:0000164;4.44e-18;1!CL:0000502;4.44e-18;1!CL:0000172;4.44e-18;1!CL:0000173;4.44e-18;1!CL:1001319;1.03e-17;1!CL:1000600;1.03e-17;1!CL:0000039;2.46e-10;7!CL:0000586;2.46e-10;7!CL:0002231;6.14e-07;3!CL:0002178;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.75e-18,1;CL:0000164,3.75e-18,1;CL:0000502,3.75e-18,1;CL:0000172,3.75e-18,1;CL:0000173,3.75e-18,1;CL:0002351,3.75e-18,1;CL:1001319,1.22e-17,1;CL:1000600,1.22e-17,1;CL:0000039,1.94e-10,7;CL:0000586,1.94e-10,7;CL:0000066,1.64e-08,253;CL:0002231,6.14e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002351;4.44e-18;1!UBERON:0009117;1.67e-07;10!UBERON:0005564;1.67e-07;10 | |||
|ontology_enrichment_disease=DOID:305!6.04e-15!106;DOID:0050687!5.68e-11!143;DOID:1749!7.37e-11!14;DOID:162!3.14e-08!235;DOID:14566!6.22e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:4430;4.44e-18;1!DOID:3493;1.57e-09;2!DOID:3905;2.55e-08;9!DOID:3095;2.31e-07;22!DOID:2994;2.31e-07;22!DOID:4556;6.88e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.75e-18,1;DOID:3493,1.86e-09,2;DOID:305,2.06e-09,106;DOID:0050687,1.15e-08,143;DOID:3905,2.55e-08,9;DOID:3095,2.02e-07,22;DOID:2994,2.02e-07,22;DOID:4556,6.88e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002394!4.86e-10!4;UBERON:0003928!4.86e-10!4;UBERON:0000058!2.48e-07!26;UBERON:0000466!2.52e-07!126;UBERON:0006853!7.17e-07!3;UBERON:0007685!7.17e-07!3;UBERON:0004134!7.17e-07!3;UBERON:0003101!8.10e-07!22;UBERON:0000079!8.10e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.03e-17;1!UBERON:0001256;1.03e-17;1!UBERON:0001259;1.03e-17;1!UBERON:0001255;1.57e-09;2!UBERON:0001556;1.57e-09;2!UBERON:0000473;3.70e-09;8!UBERON:0003101;2.21e-07;22!UBERON:0000079;2.21e-07;22!UBERON:0003135;6.74e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.22e-17,1;UBERON:0001256,1.22e-17,1;UBERON:0001259,1.22e-17,1;UBERON:0001255,1.71e-09,2;UBERON:0001556,1.71e-09,2;UBERON:0000473,3.01e-09,8;UBERON:0003101,1.98e-07,22;UBERON:0000079,1.98e-07,22;UBERON:0003135,5.81e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,19.2449266876023,0,0,0,0.451199612907412,1.15523005656622,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.192190067365106,0,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,33.9969323252033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68681276247223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23807212351111,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0.196295437002051,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,1.27595303699816,0,0,0,0,0,0,0,0,0,0,1.66059127923341,0,0,0,0,2.82811856521951,0,0,0,0,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,1.87052183685892,1.92979289023174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30245229777559,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:21449426..21449445,- | |||
}} |
Revision as of 00:26, 22 January 2014
Short description: | p@chr4:21449426..21449445, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:21449426..21449445, - |
Coexpression cluster: | C264_giant_keratoacanthoma_colon_fibrosarcoma_HES3GFP_Hep2_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.75e-18 | 1 |
enteroendocrine cell | 3.75e-18 | 1 |
type D enteroendocrine cell | 3.75e-18 | 1 |
somatostatin secreting cell | 3.75e-18 | 1 |
pancreatic D cell | 3.75e-18 | 1 |
progenitor cell of endocrine pancreas | 3.75e-18 | 1 |
bladder cell | 1.22e-17 | 1 |
lower urinary tract cell | 1.22e-17 | 1 |
germ line cell | 1.94e-10 | 7 |
germ cell | 1.94e-10 | 7 |
epithelial cell | 1.64e-08 | 253 |
epithelial cell of prostate | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.22e-17 | 1 |
wall of urinary bladder | 1.22e-17 | 1 |
mucosa of urinary bladder | 1.22e-17 | 1 |
urinary bladder | 1.71e-09 | 2 |
lower urinary tract | 1.71e-09 | 2 |
testis | 3.01e-09 | 8 |
male organism | 1.98e-07 | 22 |
male reproductive system | 1.98e-07 | 22 |
male reproductive organ | 5.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.75e-18 | 1 |
signet ring cell adenocarcinoma | 1.86e-09 | 2 |
carcinoma | 2.06e-09 | 106 |
cell type cancer | 1.15e-08 | 143 |
lung carcinoma | 2.55e-08 | 9 |
germ cell and embryonal cancer | 2.02e-07 | 22 |
germ cell cancer | 2.02e-07 | 22 |
lung large cell carcinoma | 6.88e-07 | 3 |