FFCP PHASE1:Hg19::chr4:57898713..57898727,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C772 | |||
|description=CAGE_peak_at_chr4:57898713..57898727,- | |||
|id=chr4:57898713..57898727,- | |||
|ontology_enrichment_celltype=CL:0000055!1.49e-17!180;CL:0000222!2.42e-15!119;CL:0000183!8.33e-11!59;CL:0000680!2.41e-10!57;CL:0000056!2.41e-10!57;CL:0000355!2.41e-10!57;CL:0000220!2.80e-10!246;CL:0000192!2.89e-10!42;CL:0000514!2.89e-10!42;CL:0002321!8.09e-10!248;CL:0000359!1.03e-09!32;CL:0000057!1.24e-09!75;CL:0000187!1.52e-09!54;CL:0000393!3.95e-07!60;CL:0000211!3.95e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.60e-11;32!CL:0000192;3.45e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.41e-12,121;CL:0000359,3.10e-11,32;CL:0000192,2.77e-10,43;CL:0000514,2.77e-10,43;CL:0000680,3.40e-09,58;CL:0000056,3.40e-09,58;CL:0000355,3.40e-09,58;CL:0000187,1.02e-08,55;CL:0000057,5.73e-08,76;CL:0002321,3.45e-07,250;CL:0000393,7.94e-07,61;CL:0000211,7.94e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;3.45e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!5.31e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.44e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.38e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!7.53e-17!79;UBERON:0007798!7.53e-17!79;UBERON:0004872!4.91e-16!84;UBERON:0003914!3.02e-15!118;UBERON:0000055!1.32e-14!69;UBERON:0001009!1.98e-14!113;UBERON:0004535!7.10e-14!110;UBERON:0000477!9.09e-14!286;UBERON:0001981!2.94e-13!60;UBERON:0007500!2.94e-13!60;UBERON:0004537!2.94e-13!60;UBERON:0006965!2.94e-13!60;UBERON:0000475!2.66e-12!365;UBERON:0000481!3.72e-12!347;UBERON:0000119!5.95e-12!312;UBERON:0000483!9.79e-12!309;UBERON:0001637!1.53e-11!42;UBERON:0003509!1.53e-11!42;UBERON:0004572!1.53e-11!42;UBERON:0004111!3.11e-11!241;UBERON:0003103!1.65e-10!69;UBERON:0002100!5.11e-10!216;UBERON:0002385!8.58e-10!63;UBERON:0001015!8.58e-10!63;UBERON:0000383!8.58e-10!63;UBERON:0000468!8.60e-10!659;UBERON:0004573!9.04e-10!33;UBERON:0004571!9.04e-10!33;UBERON:0005256!1.12e-09!143;UBERON:0001134!1.41e-09!61;UBERON:0002036!1.41e-09!61;UBERON:0003082!1.41e-09!61;UBERON:0000467!8.25e-09!625;UBERON:0000480!1.23e-08!626;UBERON:0000025!1.30e-08!194;UBERON:0000490!1.38e-08!138;UBERON:0000486!1.57e-08!82;UBERON:0000914!2.06e-08!83;UBERON:0002329!2.06e-08!83;UBERON:0003077!2.06e-08!83;UBERON:0003059!2.06e-08!83;UBERON:0007282!2.06e-08!83;UBERON:0009618!2.06e-08!83;UBERON:0007285!2.06e-08!83;UBERON:0004290!2.14e-08!70;UBERON:0003104!3.00e-07!238;UBERON:0009142!3.00e-07!238;UBERON:0007100!3.91e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.19e-09;33!UBERON:0004571;1.19e-09;33!UBERON:0001637;4.36e-09;42!UBERON:0003509;4.36e-09;42!UBERON:0004572;4.36e-09;42!UBERON:0007100;8.41e-08;25!UBERON:0000948;9.56e-08;22!UBERON:0003688;6.28e-07;6!UBERON:0002358;6.28e-07;6!UBERON:0003684;6.28e-07;6!UBERON:0001178;6.28e-07;6!UBERON:0000947;6.88e-07;21!UBERON:0010191;6.88e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.29e-16,78;UBERON:0007798,2.29e-16,78;UBERON:0003914,3.81e-16,117;UBERON:0001009,3.45e-15,112;UBERON:0004535,5.60e-15,109;UBERON:0000055,1.81e-14,68;UBERON:0004872,2.24e-14,83;UBERON:0001637,1.65e-12,42;UBERON:0003509,1.65e-12,42;UBERON:0004572,1.65e-12,42;UBERON:0007500,2.76e-12,59;UBERON:0001981,2.76e-12,59;UBERON:0004537,2.76e-12,59;UBERON:0006965,2.76e-12,59;UBERON:0004573,7.44e-11,33;UBERON:0004571,7.44e-11,33;UBERON:0003103,5.54e-10,68;UBERON:0002100,1.67e-09,199;UBERON:0007503,1.93e-09,78;UBERON:0003104,2.80e-09,160;UBERON:0009142,2.80e-09,160;UBERON:0005256,5.34e-09,122;UBERON:0001134,2.00e-08,62;UBERON:0002036,2.00e-08,62;UBERON:0003082,2.00e-08,62;UBERON:0002385,2.04e-08,64;UBERON:0001015,2.04e-08,64;UBERON:0000383,2.04e-08,64;UBERON:0007524,5.41e-08,73;UBERON:0000486,6.36e-08,83;UBERON:0004111,8.07e-08,240;UBERON:0002329,8.40e-08,71;UBERON:0003059,8.40e-08,71;UBERON:0007282,8.40e-08,71;UBERON:0004290,8.40e-08,71;UBERON:0009618,8.40e-08,71;UBERON:0007100,1.05e-07,27;UBERON:0000948,1.08e-07,24;UBERON:0005498,1.08e-07,24;UBERON:0004140,1.08e-07,24;UBERON:0009881,1.08e-07,24;UBERON:0004141,1.08e-07,24;UBERON:0003084,1.08e-07,24;UBERON:0007005,1.08e-07,24;UBERON:0004139,1.08e-07,24;UBERON:0004291,1.08e-07,24;UBERON:0003077,1.58e-07,72;UBERON:0007285,1.58e-07,72;UBERON:0000490,2.36e-07,148;UBERON:0000947,2.82e-07,21;UBERON:0010191,2.82e-07,21;UBERON:0000483,2.85e-07,306;UBERON:0000119,3.60e-07,309;UBERON:0003688,6.96e-07,6;UBERON:0002358,6.96e-07,6;UBERON:0003684,6.96e-07,6;UBERON:0001178,6.96e-07,6 | |||
|phase1_expression=10.9007027562334,3.8538094300377,7.61153782118244,12.0087958023756,7.59833860526389,13.9574163856059,10.1319951267324,1.89515962028049,0,1.72013755551056,0.697801167972428,0.436882744260345,0.527533956456907,0,0.662794751455832,4.70627602516243,3.61616716814386,5.84248072309899,4.87932798790507,0.738726348460727,0.204000691244253,0.626909442956176,0.85870796139317,0,1.50651167513763,0,0,0,0,0,0.154816123316076,0,1.204823675113,1.10926203050036,0,0,0.293600439334847,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,1.53435074212236,4.69870898099936,4.51204119572301,3.91085601194224,0.795285947051099,4.37971383272372,1.13441780596881,1.33037638477538,0.702678285545008,1.63723844372141,2.18577172975525,0.741568885568859,0,0,0.132957960518865,0,0,0,0.198762407366705,2.58070378531837,1.73570250803797,0,2.93649605346934,0.825354125820202,0.208994966536811,2.84258435086262,1.42306505074684,2.00832367658802,4.43112248820062,3.04108842287405,3.66093086322254,0.735326160691737,4.0507097394088,0.535798369704479,0.44905874525234,0.112611480483322,0,0,0.916008719652036,0,0,0.436094052142534,11.9273268406876,7.09130865321647,1.85372853138506,18.0707071071753,1.77334191099179,2.24271040056923,7.47242970107935,18.500066131287,0.933633106199299,1.61652806483626,2.28846664358842,3.63257826347835,0.576175924479999,0.234321431833797,0,0.570471821544449,0,0,0,0,0.61246251376468,1.35117749042945,0.413303124703062,1.18800285728205,5.43987244412825,0,5.74894513452991,0.673344455816265,0.125118519871964,0,0.438977620880838,5.82326812018137,1.65261864797256,4.08355859376076,4.84352016359927,2.98980344345994,2.33125091275518,2.70081986475962,0.824420233907511,1.8034837803194,2.23340227597908,0.506328996723799,1.16924406193438,0.504867548488229,0.644349290496095,3.07127507955743,3.55009592516614,1.41052937518696,3.05209066158878,2.12586938479627,0.545492241181669,1.43402297694502,0,0,0,0.10366105501537,0,0,3.12899064659632,3.85944562915731,2.76269842704961,1.85747171212792,1.44375896333917,0.946454400318751,0.505754070234305,0,1.10293972732394,0.653638332277218,0.474541238222193,0.943819157121151,0.784885860501384,1.53898862778556,1.4763109092493,2.80483547606892,0.8231480226628,2.94017422771084,0,0,2.36315962672562,0,0.368965315629341,2.23038153388083,1.42675371031213,0,0.603173834469785,0.925884451585296,0.325808305310325,1.03993478527958,4.3299402607582,0.579652024875384,2.7003999674239,2.30986316417718,4.62985512576611,3.42457474022277,0,0,0,0,0,0,3.69560682037491,0.708875486211932,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.952468414382536,0,1.17217447210047,1.71072446022705,1.13110241973656,1.50171528921959,0.571652865261156,0.224262168690721,0.87192013766656,1.24675085895615,6.85140093516222,3.57656445851882,0.845302752556,4.78688609852767,2.08014873822732,0,0,0.266422179016099,4.00338382242813,1.62786481617433,0.823240336780769,0.325736184293735,2.84313558994037,0.791951872933429,4.22015127883421,1.74306691720059,1.99945982364114,0,0,0,7.66799537573064,1.14861935834114,1.42636905040718,4.05387658669222,2.4657158706046,0.895304816199478,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0.12269149171914,0.500170521059677,0,18.5094066762418,18.735043823702,16.0856463334613,9.83987885938791,0.902838299183157,11.3703752027992,2.0694614258501,3.98535359121262,0.553107505625109,0.781952530212746,2.15381273209015,2.74514739048685,0,0,0,0,0,0.30239029332968,9.17998888929474,3.99001130548962,4.2099014164961,9.09787959715477,11.2575594794675,8.5252578206112,17.8101679733989,0.308419387605311,2.84098760501003,0.246381468041427,0,1.04589340613963,0.120859449591622,2.6065841139427,0.276242966807689,1.37777337797528,1.27463817604702,1.57349297951309,0.451199612907412,2.84956747286335,0.784349769176855,2.92278449306521,4.01096189792928,5.68666920354483,1.02056223165909,1.51141141271498,7.71136263451447,1.08378575017541,4.51520796469368,1.52925763827023,0,2.23874754722178,0,0,0.512900250232778,4.26419039409617,0.650756789328606,1.44257416306811,0.27470839445503,0.41254749960294,0,0,4.82051789532479,0.290012154876366,0.616194468458578,0,0.275673144969061,1.6113036730241,0.580066775656914,0.0852266274161009,1.24644849905432,3.47098322258054,1.92190067365106,0.765676274967505,0.50578890427775,4.18360994367557,23.2961136654674,0.6970372701606,1.84820148105653,2.66153015158511,0,6.4863476686372,2.43312307461385,3.72158369359667,2.21465597303108,3.0500831027812,0.511795582622668,0,0.95460974377781,3.13979456079692,2.87795932133304,1.09814811894422,0.706874414074119,6.2676569287728,0,2.10629228119491,1.46290121726877,4.87426979262569,1.05650146756755,2.59349831675173,1.41405431953713,0,1.10273068709225,5.30751180192976,3.94605796728386,1.73632660280006,0.655894752046633,5.88440093191842,2.7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| |||
|short_description=p@chr4:57898713..57898727,- | |||
}} |
Revision as of 01:12, 22 January 2014
Short description: | p@chr4:57898713..57898727, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr4:57898713..57898727, - |
Coexpression cluster: | C772_Smooth_Fibroblast_Adipocyte_Preadipocyte_hepatic_Renal_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.41e-12 | 121 |
vascular associated smooth muscle cell | 3.10e-11 | 32 |
smooth muscle cell | 2.77e-10 | 43 |
smooth muscle myoblast | 2.77e-10 | 43 |
muscle precursor cell | 3.40e-09 | 58 |
myoblast | 3.40e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.40e-09 | 58 |
muscle cell | 1.02e-08 | 55 |
fibroblast | 5.73e-08 | 76 |
embryonic cell | 3.45e-07 | 250 |
electrically responsive cell | 7.94e-07 | 61 |
electrically active cell | 7.94e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.38e-10 | 14 |