FFCP PHASE1:Hg19::chr5:191719..191728,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389257 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37268 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=67bp_to_BC156515,BC172511_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_12_at_LRRC14B_5end | |||
|id=chr5:191719..191728,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.46e-50;1!UBERON:0010227;2.42e-50;1!UBERON:0004872;1.89e-08;7 | |||
|ontology_enrichment_disease=DOID:114!8.80e-18!2;DOID:178!1.91e-09!1;DOID:326!1.91e-09!1;DOID:3978!1.91e-09!1;DOID:3394!1.91e-09!1;DOID:5844!1.91e-09!1;DOID:1287!2.36e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:114;8.10e-26;2!DOID:1287;1.21e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.14e-26,2;DOID:1287,1.13e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!5.99e-19!27;UBERON:0001630!3.45e-18!2;UBERON:0005090!3.45e-18!2;UBERON:0004151!1.53e-12!3;UBERON:0001723!3.57e-12!3;UBERON:0001033!3.57e-12!3;UBERON:0010056!3.57e-12!3;UBERON:0003978!5.28e-12!3;UBERON:0009751!5.28e-12!3;UBERON:0000946!5.28e-12!3;UBERON:0002523!5.28e-12!3;UBERON:0005983!5.28e-12!3;UBERON:0002165!5.28e-12!3;UBERON:0002062!5.28e-12!3;UBERON:0007280!5.28e-12!3;UBERON:0003103!1.25e-10!69;UBERON:0002079!4.09e-10!1;UBERON:0002426!5.31e-10!1;UBERON:0003831!5.31e-10!1;UBERON:0003898!5.31e-10!1;UBERON:0004830!5.31e-10!1;UBERON:0001774!5.31e-10!1;UBERON:0003830!5.31e-10!1;UBERON:0005175!5.31e-10!1;UBERON:0003897!5.31e-10!1;UBERON:0001103!5.31e-10!1;UBERON:0010084!5.31e-10!1;UBERON:0002084!5.79e-10!1;UBERON:0002082!5.79e-10!1;UBERON:0004706!5.79e-10!1;UBERON:0005418!6.31e-10!1;UBERON:0001389!6.31e-10!1;UBERON:0000026!6.31e-10!1;UBERON:0008784!6.31e-10!1;UBERON:0006058!6.31e-10!1;UBERON:0003663!6.31e-10!1;UBERON:0001383!6.31e-10!1;UBERON:0004256!6.31e-10!1;UBERON:0002529!6.31e-10!1;UBERON:0004708!6.31e-10!1;UBERON:0002101!6.31e-10!1;UBERON:0004709!6.31e-10!1;UBERON:0003661!6.31e-10!1;UBERON:0002471!6.31e-10!1;UBERON:0004357!6.31e-10!1;UBERON:0009872!6.31e-10!1;UBERON:0004347!6.31e-10!1;UBERON:0005420!6.31e-10!1;UBERON:0005732!6.31e-10!1;UBERON:0006057!6.31e-10!1;UBERON:0000978!6.31e-10!1;UBERON:0002103!6.31e-10!1;UBERON:0001665!6.31e-10!1;UBERON:0003823!6.31e-10!1;UBERON:0000154!6.31e-10!1;UBERON:0005733!6.31e-10!1;UBERON:0005730!6.31e-10!1;UBERON:0000989!8.17e-10!1;UBERON:0008811!8.17e-10!1;UBERON:0006258!8.17e-10!1;UBERON:0005876!8.17e-10!1;UBERON:0004874!8.17e-10!1;UBERON:0002135!1.06e-09!1;UBERON:0002146!1.48e-09!1;UBERON:0005623!1.48e-09!1;UBERON:0000948!9.60e-09!24;UBERON:0005498!9.60e-09!24;UBERON:0004140!9.60e-09!24;UBERON:0009881!9.60e-09!24;UBERON:0004141!9.60e-09!24;UBERON:0003084!9.60e-09!24;UBERON:0007005!9.60e-09!24;UBERON:0004139!9.60e-09!24;UBERON:0004291!9.60e-09!24;UBERON:0007023!1.94e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.42e-50;1!UBERON:0002081;5.56e-26;2!UBERON:0007100;1.05e-18;25!UBERON:0004151;8.00e-18;3!UBERON:0000948;4.14e-10;22!UBERON:0003103;2.39e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.42e-50,1;UBERON:0002081,5.56e-26,2;UBERON:0010227,5.56e-26,2;UBERON:0004151,8.00e-18,3;UBERON:0007100,2.09e-17,27;UBERON:0000948,2.35e-09,24;UBERON:0005498,2.35e-09,24;UBERON:0004140,2.35e-09,24;UBERON:0009881,2.35e-09,24;UBERON:0004141,2.35e-09,24;UBERON:0003084,2.35e-09,24;UBERON:0007005,2.35e-09,24;UBERON:0004139,2.35e-09,24;UBERON:0004291,2.35e-09,24;UBERON:0003103,1.88e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,1.28767814440971,0.223171457441873,4.16537529417703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630893960010027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.513314034281235,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0.435433495793923,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@LRRC14B | |||
}} |
Revision as of 04:26, 22 January 2014
Short description: | p12@LRRC14B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_LRRC14B_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 67bp_to_BC156515, BC172511_5end |
EntrezGene: | LRRC14B |
HGNC: | 37268 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.42e-50 | 1 |
cardiac atrium | 5.56e-26 | 2 |
future cardiac atrium | 5.56e-26 | 2 |
cardiac chamber | 8.00e-18 | 3 |
primary circulatory organ | 2.09e-17 | 27 |
heart | 2.35e-09 | 24 |
primitive heart tube | 2.35e-09 | 24 |
primary heart field | 2.35e-09 | 24 |
anterior lateral plate mesoderm | 2.35e-09 | 24 |
heart tube | 2.35e-09 | 24 |
heart primordium | 2.35e-09 | 24 |
cardiac mesoderm | 2.35e-09 | 24 |
cardiogenic plate | 2.35e-09 | 24 |
heart rudiment | 2.35e-09 | 24 |
compound organ | 1.88e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.14e-26 | 2 |
cardiovascular system disease | 1.13e-13 | 4 |