FFCP PHASE1:Hg19::chr5:151258901..151258902,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4368 | |||
|description=CAGE_peak_at_chr5:151258901..151258902,+ | |||
|id=chr5:151258901..151258902,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.55e-98;1!UBERON:0003056;5.04e-34;3 | |||
|ontology_enrichment_disease=DOID:225!2.30e-21!1;DOID:74!2.23e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.00e-13;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.07e-13,8 | |||
|ontology_enrichment_uberon=UBERON:0000941!1.53e-21!1;UBERON:0004904!1.53e-21!1;UBERON:0002464!1.53e-21!1;UBERON:0001021!1.53e-21!1;UBERON:0001785!1.53e-21!1;UBERON:0003714!1.82e-11!2;UBERON:0005162!1.82e-11!2;UBERON:0000122!1.82e-11!2;UBERON:0002110!6.34e-08!3;UBERON:0006242!6.34e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.55e-98;1!UBERON:0001785;1.55e-98;1!UBERON:0002464;1.55e-98;1!UBERON:0004904;1.55e-98;1!UBERON:0001021;1.55e-98;1!UBERON:0003714;3.52e-50;2!UBERON:0005162;3.52e-50;2!UBERON:0000122;3.52e-50;2!UBERON:0000010;2.31e-12;8!UBERON:0004732;5.49e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.37e-99,1;UBERON:0001785,9.37e-99,1;UBERON:0002464,9.37e-99,1;UBERON:0004904,9.37e-99,1;UBERON:0001021,9.37e-99,1;UBERON:0003902,9.37e-99,1;UBERON:0005425,9.37e-99,1;UBERON:0003714,2.74e-50,2;UBERON:0005162,2.74e-50,2;UBERON:0000122,2.74e-50,2;UBERON:0001781,5.56e-26,4;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0000010,2.19e-12,8;UBERON:0004732,5.28e-09,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23138781124008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.960225567247268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:151258901..151258902,+ | |||
}} |
Revision as of 08:34, 22 January 2014
Short description: | p@chr5:151258901..151258902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr5:151258901..151258902, + |
Coexpression cluster: | C4368_optic_leukemia_myelodysplastic_occipital_CD8_chronic_cord |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.37e-99 | 1 |
cranial nerve | 9.37e-99 | 1 |
nerve trunk | 9.37e-99 | 1 |
nerve connecting eye with brain | 9.37e-99 | 1 |
nerve | 9.37e-99 | 1 |
retinal neural layer | 9.37e-99 | 1 |
presumptive neural retina | 9.37e-99 | 1 |
neural tissue | 2.74e-50 | 2 |
multi cell component structure | 2.74e-50 | 2 |
neuron projection bundle | 2.74e-50 | 2 |
layer of retina | 5.56e-26 | 4 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
peripheral nervous system | 2.19e-12 | 8 |
segmental subdivision of nervous system | 5.28e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.07e-13 | 8 |