FFCP PHASE1:Hg19::chr6:33282024..33282046,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6892 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11566 | |||
|TSSclassifier=strong | |||
|UniProt=A2AB90,E9PGM2 | |||
|association_with_transcript=0bp_to_ENST00000475304,ENST00000489157_5end | |||
|description=CAGE_peak_2_at_TAPBP_5end | |||
|id=chr6:33282024..33282046,- | |||
|ontology_enrichment_celltype=CL:0000220!1.15e-20!246;CL:0002321!1.33e-20!248;CL:0000222!1.48e-17!119;CL:0000066!1.31e-16!254;CL:0000055!7.52e-14!180;CL:0000548!4.52e-11!679;CL:0000004!4.52e-11!679;CL:0000255!4.52e-11!679;CL:0000183!6.99e-11!59;CL:0000192!8.19e-11!42;CL:0000514!8.19e-11!42;CL:0000012!2.81e-10!682;CL:0000359!5.46e-09!32;CL:0000680!6.33e-09!57;CL:0000056!6.33e-09!57;CL:0000355!6.33e-09!57;CL:0000187!7.89e-09!54;CL:0000076!9.81e-09!62;CL:0002371!2.23e-08!591;CL:0000213!3.50e-08!57;CL:0000215!3.50e-08!57;CL:0000144!3.56e-08!625;CL:1000449!9.97e-08!16;CL:0000057!1.59e-07!75;CL:0002078!4.93e-07!44;CL:1000497!8.29e-07!18;CL:0002518!8.29e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.33e-08;32!CL:1000449;2.47e-08;15!CL:0000192;9.91e-08;43!CL:1000497;2.75e-07;17!CL:0002518;2.75e-07;17!CL:0002681;9.65e-07;12!CL:0002584;9.65e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.72e-21,250;CL:0000222,1.15e-17,121;CL:0000066,9.09e-17,253;CL:0000192,1.87e-10,43;CL:0000514,1.87e-10,43;CL:0000076,3.77e-09,63;CL:0000359,5.46e-09,32;CL:0000680,1.10e-08,58;CL:0000056,1.10e-08,58;CL:0000355,1.10e-08,58;CL:0000187,1.39e-08,55;CL:0000213,1.69e-08,58;CL:0000215,1.69e-08,58;CL:1000449,2.36e-08,15;CL:0000057,8.55e-08,76;CL:0002078,2.37e-07,45;CL:1000497,2.64e-07,17;CL:0002518,2.64e-07,17;CL:0002681,9.45e-07,12;CL:0002584,9.45e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;9.91e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.15e-17!118;UBERON:0000119!4.40e-15!312;UBERON:0000483!7.83e-15!309;UBERON:0000477!3.70e-14!286;UBERON:0002049!2.45e-13!79;UBERON:0007798!2.45e-13!79;UBERON:0005256!3.96e-13!143;UBERON:0000481!1.16e-12!347;UBERON:0004872!3.22e-12!84;UBERON:0000475!5.75e-12!365;UBERON:0001981!1.41e-11!60;UBERON:0007500!1.41e-11!60;UBERON:0004537!1.41e-11!60;UBERON:0006965!1.41e-11!60;UBERON:0000055!4.17e-11!69;UBERON:0001637!1.05e-10!42;UBERON:0003509!1.05e-10!42;UBERON:0004572!1.05e-10!42;UBERON:0004111!1.59e-10!241;UBERON:0000486!6.06e-10!82;UBERON:0000468!8.94e-10!659;UBERON:0000025!1.24e-09!194;UBERON:0000490!1.71e-09!138;UBERON:0000914!2.05e-09!83;UBERON:0002329!2.05e-09!83;UBERON:0003077!2.05e-09!83;UBERON:0003059!2.05e-09!83;UBERON:0007282!2.05e-09!83;UBERON:0009618!2.05e-09!83;UBERON:0007285!2.05e-09!83;UBERON:0003104!2.08e-09!238;UBERON:0009142!2.08e-09!238;UBERON:0000467!3.94e-09!625;UBERON:0002100!4.02e-09!216;UBERON:0000480!5.42e-09!626;UBERON:0001009!7.27e-09!113;UBERON:0004573!1.06e-08!33;UBERON:0004571!1.06e-08!33;UBERON:0004535!1.39e-08!110;UBERON:0000064!2.02e-08!219;UBERON:0004290!7.12e-08!70;UBERON:0004211!9.97e-08!16;UBERON:0001285!9.97e-08!16;UBERON:0007684!9.97e-08!16;UBERON:0003220!9.97e-08!16;UBERON:0004208!9.97e-08!16;UBERON:0001134!2.38e-07!61;UBERON:0002036!2.38e-07!61;UBERON:0003082!2.38e-07!61;UBERON:0002050!2.81e-07!605;UBERON:0005423!2.81e-07!605;UBERON:0000923!3.55e-07!604;UBERON:0005291!3.55e-07!604;UBERON:0006598!3.55e-07!604;UBERON:0002532!3.55e-07!604;UBERON:0000922!3.83e-07!612;UBERON:0002385!6.03e-07!63;UBERON:0001015!6.03e-07!63;UBERON:0000383!6.03e-07!63;UBERON:0006555!6.51e-07!17;UBERON:0005103!6.51e-07!17;UBERON:0000083!6.51e-07!17;UBERON:0009201!6.51e-07!17;UBERON:0004819!6.51e-07!17;UBERON:0006553!6.51e-07!17;UBERON:0003074!6.51e-07!17;UBERON:0003060!6.51e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.68e-08;74!UBERON:0006555;2.47e-08;15!UBERON:0004819;2.47e-08;15!UBERON:0001285;2.47e-08;15!UBERON:0007684;2.47e-08;15!UBERON:0001637;2.70e-08;42!UBERON:0003509;2.70e-08;42!UBERON:0004572;2.70e-08;42!UBERON:0004573;3.00e-08;33!UBERON:0004571;3.00e-08;33!UBERON:0007500;5.13e-07;56!UBERON:0001981;5.13e-07;56!UBERON:0004537;5.13e-07;56!UBERON:0001851;6.72e-07;15!UBERON:0000353;8.84e-07;15!UBERON:0001225;9.65e-07;12!UBERON:0008987;9.65e-07;12 | |||
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| |||
|short_description=p2@TAPBP | |||
}} |
Revision as of 11:25, 22 January 2014
Short description: | p2@TAPBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TAPBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000475304, ENST00000489157_5end |
EntrezGene: | TAPBP |
HGNC: | 11566 |
UniProt: | A2AB90E9PGM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.72e-21 | 250 |
mesodermal cell | 1.15e-17 | 121 |
epithelial cell | 9.09e-17 | 253 |
smooth muscle cell | 1.87e-10 | 43 |
smooth muscle myoblast | 1.87e-10 | 43 |
squamous epithelial cell | 3.77e-09 | 63 |
vascular associated smooth muscle cell | 5.46e-09 | 32 |
muscle precursor cell | 1.10e-08 | 58 |
myoblast | 1.10e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.10e-08 | 58 |
muscle cell | 1.39e-08 | 55 |
lining cell | 1.69e-08 | 58 |
barrier cell | 1.69e-08 | 58 |
epithelial cell of nephron | 2.36e-08 | 15 |
fibroblast | 8.55e-08 | 76 |
meso-epithelial cell | 2.37e-07 | 45 |
kidney cell | 2.64e-07 | 17 |
kidney epithelial cell | 2.64e-07 | 17 |
kidney cortical cell | 9.45e-07 | 12 |
renal cortical epithelial cell | 9.45e-07 | 12 |