FFCP PHASE1:Hg19::chr6:39787581..39787589,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C397 | |||
|description=CAGE_peak_at_chr6:39787581..39787589,- | |||
|id=chr6:39787581..39787589,- | |||
|ontology_enrichment_celltype=CL:0000188!1.33e-08!9;CL:0000594!3.47e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002262;2.23e-11;2!CL:1000398;2.23e-11;2!CL:0000188;9.65e-10;9!CL:0002590;4.84e-08;3!CL:0002619;6.78e-08;3!CL:0000515;6.78e-08;3!CL:0000214;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.23e-11,2;CL:1000398,2.23e-11,2;CL:0000188,1.20e-09,9;CL:0002590,4.84e-08,3;CL:0000214,5.93e-08,3;CL:0002619,6.34e-08,3;CL:0000222,8.73e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.37e-10!115;UBERON:0006331!1.34e-07!3;UBERON:0000988!6.24e-07!3;UBERON:0001049!8.44e-07!57;UBERON:0005068!8.44e-07!57;UBERON:0006241!8.44e-07!57;UBERON:0007135!8.44e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;9.39e-12;16!UBERON:0002036;9.39e-12;16!UBERON:0001281;2.23e-11;2!UBERON:0003497;2.23e-11;2!UBERON:0003909;2.23e-11;2!UBERON:0003835;2.23e-11;2!UBERON:0001280;5.18e-08;3!UBERON:0004647;5.18e-08;3!UBERON:0006915;6.78e-08;3!UBERON:0007616;6.78e-08;3!UBERON:0002217;6.78e-08;3!UBERON:0002018;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.23e-11,2;UBERON:0003497,2.23e-11,2;UBERON:0003909,2.23e-11,2;UBERON:0003835,2.23e-11,2;UBERON:0000486,1.68e-08,83;UBERON:0001280,5.18e-08,3;UBERON:0004647,5.18e-08,3;UBERON:0005171,5.18e-08,3;UBERON:0006915,5.93e-08,3;UBERON:0007616,5.93e-08,3;UBERON:0002217,5.93e-08,3;UBERON:0002018,5.93e-08,3;UBERON:0002329,4.55e-07,71;UBERON:0003059,4.55e-07,71;UBERON:0007282,4.55e-07,71;UBERON:0004290,4.55e-07,71;UBERON:0009618,4.55e-07,71;UBERON:0003077,5.70e-07,72;UBERON:0007285,5.70e-07,72;UBERON:0007524,7.10e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,1.34349284543955,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24864030732128,0,0.298897361103602,0,0,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0.410952645100767,1.79060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.328508624055237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.290012154876366,1.23238893691716,0,1.10269257987624,0.429680979473094,0.145016693914229,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,4.74569137078089,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958337652243951,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,0.646414781807753,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0.447764408660622,0.233713309847224,0,0.189403005275089,1.25783950876288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.2013327038314,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0.213233981900981,0.23806443146374,0,0.124149428591716,0,0.25458863311266,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:39787581..39787589,- | |||
}} |
Revision as of 11:48, 22 January 2014
Short description: | p@chr6:39787581..39787589, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:39787581..39787589, - |
Coexpression cluster: | C397_mesenchymal_Myoblast_rhabdomyosarcoma_Hepatic_Melanocyte_astrocytoma_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.23e-11 | 2 |
endothelial cell of hepatic sinusoid | 2.23e-11 | 2 |
cell of skeletal muscle | 1.20e-09 | 9 |
smooth muscle cell of the brain vasculature | 4.84e-08 | 3 |
synovial cell | 5.93e-08 | 3 |
adult endothelial progenitor cell | 6.34e-08 | 3 |
mesodermal cell | 8.73e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.23e-11 | 2 |
abdomen blood vessel | 2.23e-11 | 2 |
sinusoid | 2.23e-11 | 2 |
abdominal segment blood vessel | 2.23e-11 | 2 |
multilaminar epithelium | 1.68e-08 | 83 |
liver parenchyma | 5.18e-08 | 3 |
liver lobule | 5.18e-08 | 3 |
hepatic duct | 5.18e-08 | 3 |
stratified squamous epithelium | 5.93e-08 | 3 |
layer of synovial tissue | 5.93e-08 | 3 |
synovial joint | 5.93e-08 | 3 |
synovial membrane of synovial joint | 5.93e-08 | 3 |
somite | 4.55e-07 | 71 |
presomitic mesoderm | 4.55e-07 | 71 |
presumptive segmental plate | 4.55e-07 | 71 |
dermomyotome | 4.55e-07 | 71 |
trunk paraxial mesoderm | 4.55e-07 | 71 |
paraxial mesoderm | 5.70e-07 | 72 |
presumptive paraxial mesoderm | 5.70e-07 | 72 |
dense mesenchyme tissue | 7.10e-07 | 73 |