FFCP PHASE1:Hg19::chr6:135424186..135424200,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10767 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4834 | |||
|TSSclassifier=not | |||
|UniProt=E9PMN1 | |||
|association_with_transcript=0bp_to_ENST00000529882_5end | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_4_at_HBS1L_5end | |||
|id=chr6:135424186..135424200,- | |||
|ontology_enrichment_celltype=CL:0000542!1.54e-24!53;CL:0000051!1.54e-24!53;CL:0000838!1.88e-22!52;CL:0000084!1.11e-20!25;CL:0000827!1.11e-20!25;CL:0000791!2.37e-20!18;CL:0000789!2.37e-20!18;CL:0002420!2.37e-20!18;CL:0002419!2.37e-20!18;CL:0000790!2.37e-20!18;CL:0000625!3.39e-17!11;CL:0000738!2.90e-16!140;CL:0002087!1.55e-15!119;CL:0000037!3.44e-14!172;CL:0000566!3.44e-14!172;CL:0000988!5.11e-13!182;CL:0000842!7.80e-12!3;CL:0002031!6.47e-11!124;CL:0000224!5.41e-09!4;CL:0002032!1.28e-08!165;CL:0000837!1.28e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.93e-15;25!CL:0000625;4.47e-13;11!CL:0000791;3.23e-08;18!CL:0000789;3.23e-08;18!CL:0002419;3.23e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.21e-15,25;CL:0000827,3.21e-15,25;CL:0000625,4.29e-13,11;CL:0000791,3.15e-08,18;CL:0000789,3.15e-08,18;CL:0002420,3.15e-08,18;CL:0002419,3.15e-08,18;CL:0000790,3.15e-08,18;CL:0000838,2.56e-07,52;CL:0000542,3.52e-07,53;CL:0000051,3.52e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0006965;4.70e-09;2!CL:0000790;3.23e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.99e-12!15;UBERON:0000179!7.99e-12!15;UBERON:0000463!7.99e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.35e-32;2!UBERON:0005058;3.35e-32;2!UBERON:0009113;3.35e-32;2!UBERON:0004177;1.63e-13;5!UBERON:0005057;1.63e-13;5!UBERON:0000341;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.21e-16,4;UBERON:0005058,1.21e-16,4;UBERON:0009113,1.21e-16,4;UBERON:0003295,1.21e-16,4;UBERON:0005562,1.21e-16,4;UBERON:0000974,1.47e-14,10;UBERON:0003351,2.02e-11,6;UBERON:0004177,6.40e-10,7;UBERON:0005057,6.40e-10,7;UBERON:0000341,6.94e-09,2;UBERON:0003408,3.33e-07,10;UBERON:0001042,3.33e-07,10;UBERON:0009145,3.33e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.401088894940283,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0,0.501559486172034,0.32592226663359,0,1.94826728407911,0,0,0.221533894583621,0.541607727530031,0,0.260118695119756,0,0,0,1.03800594213442,1.87278579662799,0,0,0,0.34362744548263,0,0.637130828648193,1.30216690771284,2.85135613334512,0.752875595388864,1.15187950038977,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0.648473311192717,0,0,0,0,0,0.371606350251437,0,2.63224820389132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1903221573187,13.4990821557253,20.6708798605207,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,2.81783311027437,0 | |||
|short_description=p4@HBS1L | |||
}} |
Revision as of 14:02, 22 January 2014
Short description: | p4@HBS1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HBS1L_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000529882_5end |
EntrezGene: | HBS1L |
HGNC: | 4834 |
UniProt: | E9PMN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.21e-15 | 25 |
pro-T cell | 3.21e-15 | 25 |
CD8-positive, alpha-beta T cell | 4.29e-13 | 11 |
mature alpha-beta T cell | 3.15e-08 | 18 |
alpha-beta T cell | 3.15e-08 | 18 |
immature T cell | 3.15e-08 | 18 |
mature T cell | 3.15e-08 | 18 |
immature alpha-beta T cell | 3.15e-08 | 18 |
lymphoid lineage restricted progenitor cell | 2.56e-07 | 52 |
lymphocyte | 3.52e-07 | 53 |
common lymphoid progenitor | 3.52e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.21e-16 | 4 |
hemolymphoid system gland | 1.21e-16 | 4 |
thymic region | 1.21e-16 | 4 |
pharyngeal gland | 1.21e-16 | 4 |
thymus primordium | 1.21e-16 | 4 |
neck | 1.47e-14 | 10 |
pharyngeal epithelium | 2.02e-11 | 6 |
hemopoietic organ | 6.40e-10 | 7 |
immune organ | 6.40e-10 | 7 |
throat | 6.94e-09 | 2 |
gland of gut | 3.33e-07 | 10 |
chordate pharynx | 3.33e-07 | 10 |
pharyngeal region of foregut | 3.33e-07 | 10 |