FFCP PHASE1:Hg19::chr7:13447097..13447101,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1985 | |||
|description=CAGE_peak_at_chr7:13447097..13447101,+ | |||
|id=chr7:13447097..13447101,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.87e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.93e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.97e-19;1!UBERON:0003056;2.71e-07;3 | |||
|ontology_enrichment_disease=DOID:3119!5.56e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;4.37e-21;14!DOID:4960;2.97e-19;1!DOID:0070004;2.97e-19;1!DOID:3493;1.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.85e-21,14;DOID:4960,3.91e-19,1;DOID:0070004,3.91e-19,1;DOID:3493,1.72e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002619!4.65e-11!22;UBERON:0001950!3.60e-10!20;UBERON:0001869!6.17e-10!32;UBERON:0000956!1.63e-09!25;UBERON:0000203!1.63e-09!25;UBERON:0001893!3.32e-09!34;UBERON:0007023!1.56e-08!115;UBERON:0002771!2.86e-08!3;UBERON:0002791!4.02e-08!33;UBERON:0002020!8.09e-08!34;UBERON:0003528!8.09e-08!34;UBERON:0005743!1.41e-07!86;UBERON:0000073!2.48e-07!94;UBERON:0001016!2.48e-07!94;UBERON:0001017!2.72e-07!82;UBERON:0002780!3.28e-07!41;UBERON:0001890!3.28e-07!41;UBERON:0006240!3.28e-07!41;UBERON:0003080!5.58e-07!42;UBERON:0000200!8.06e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.97e-19;1!UBERON:0001785;2.97e-19;1!UBERON:0002464;2.97e-19;1!UBERON:0004904;2.97e-19;1!UBERON:0001021;2.97e-19;1!UBERON:0000945;1.05e-15;5!UBERON:0010039;1.05e-15;5!UBERON:0003714;2.60e-10;2!UBERON:0005162;2.60e-10;2!UBERON:0000122;2.60e-10;2!UBERON:0005409;9.12e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.88e-19,1;UBERON:0001785,1.88e-19,1;UBERON:0002464,1.88e-19,1;UBERON:0004904,1.88e-19,1;UBERON:0001021,1.88e-19,1;UBERON:0003902,1.88e-19,1;UBERON:0005425,1.88e-19,1;UBERON:0003714,2.07e-10,2;UBERON:0005162,2.07e-10,2;UBERON:0000122,2.07e-10,2;UBERON:0000945,3.52e-10,8;UBERON:0010039,3.52e-10,8;UBERON:0005409,6.56e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0.87754158861589,0.10893846351899,0,0.0769502585037971,0.227884111694002,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0.794858446811959,0.696418755514666,0,0,0,0.999048047910651,3.02589876023623,3.6651710773093,1.02956998717179,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,1.38328142328561,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.807378228159255,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,1.56215619722769,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.532214220975833,0,0.171488009437418,0,0,0,0,0,0.157115589916002,0,0.913158720509496,0.215927591218621,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68219434960993,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,1.41095188908457,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.109265571963696,1.39368351112581,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:13447097..13447101,+ | |||
}} |
Revision as of 15:45, 22 January 2014
Short description: | p@chr7:13447097..13447101, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:13447097..13447101, + |
Coexpression cluster: | C1985_gastric_signet_lymphangiectasia_Prostate_smallcell_Intestinal_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.88e-19 | 1 |
cranial nerve | 1.88e-19 | 1 |
nerve trunk | 1.88e-19 | 1 |
nerve connecting eye with brain | 1.88e-19 | 1 |
nerve | 1.88e-19 | 1 |
retinal neural layer | 1.88e-19 | 1 |
presumptive neural retina | 1.88e-19 | 1 |
neural tissue | 2.07e-10 | 2 |
multi cell component structure | 2.07e-10 | 2 |
neuron projection bundle | 2.07e-10 | 2 |
stomach | 3.52e-10 | 8 |
food storage organ | 3.52e-10 | 8 |
gastrointestinal system | 6.56e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.85e-21 | 14 |
bone marrow cancer | 3.91e-19 | 1 |
myeloma | 3.91e-19 | 1 |
signet ring cell adenocarcinoma | 1.72e-10 | 2 |