FFCP PHASE1:Hg19::chr7:29233570..29233581,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |||
|TSSclassifier=weak | |||
|UniProt=P52757 | |||
|association_with_transcript=-446bp_to_ENST00000222792_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_26_at_CHN2_5end | |||
|id=chr7:29233570..29233581,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.85e-118;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;3.49e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.49e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.39e-18!57;UBERON:0005068!6.39e-18!57;UBERON:0006241!6.39e-18!57;UBERON:0007135!6.39e-18!57;UBERON:0002616!3.52e-17!59;UBERON:0000955!1.43e-15!69;UBERON:0006238!1.43e-15!69;UBERON:0002346!3.09e-14!90;UBERON:0001017!1.81e-12!82;UBERON:0004733!5.30e-12!12;UBERON:0002028!5.30e-12!12;UBERON:0007277!5.30e-12!12;UBERON:0005743!1.06e-11!86;UBERON:0002680!2.30e-11!9;UBERON:0001895!2.30e-11!9;UBERON:0010092!2.30e-11!9;UBERON:0001893!3.63e-11!34;UBERON:0004732!5.02e-11!13;UBERON:0002780!7.54e-11!41;UBERON:0001890!7.54e-11!41;UBERON:0006240!7.54e-11!41;UBERON:0003075!1.53e-10!86;UBERON:0007284!1.53e-10!86;UBERON:0003080!1.54e-10!42;UBERON:0000073!3.26e-10!94;UBERON:0001016!3.26e-10!94;UBERON:0001869!6.52e-10!32;UBERON:0002791!1.46e-09!33;UBERON:0003076!1.84e-09!15;UBERON:0003057!1.84e-09!15;UBERON:0002020!2.72e-09!34;UBERON:0003528!2.72e-09!34;UBERON:0007023!5.26e-09!115;UBERON:0001950!2.72e-08!20;UBERON:0000153!2.86e-08!129;UBERON:0007811!2.86e-08!129;UBERON:0000033!6.27e-08!123;UBERON:0002021!7.59e-08!5;UBERON:0000025!1.53e-07!194;UBERON:0002619!1.73e-07!22;UBERON:0002037!3.60e-07!6;UBERON:0006215!3.60e-07!6;UBERON:0003688!9.97e-07!6;UBERON:0002358!9.97e-07!6;UBERON:0003684!9.97e-07!6;UBERON:0001178!9.97e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.01e-60;6!UBERON:0002680;3.11e-40;9!UBERON:0001895;3.11e-40;9!UBERON:0004733;1.91e-30;12!UBERON:0002028;1.91e-30;12!UBERON:0004732;3.48e-28;13!UBERON:0000002;7.25e-08;6!UBERON:0001560;7.25e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.15e-60,6;UBERON:0006215,8.15e-60,6;UBERON:0002680,2.91e-40,9;UBERON:0001895,2.91e-40,9;UBERON:0010092,2.91e-40,9;UBERON:0004733,1.81e-30,12;UBERON:0002028,1.81e-30,12;UBERON:0007277,1.81e-30,12;UBERON:0004732,3.33e-28,13;UBERON:0003076,1.40e-24,15;UBERON:0003057,1.40e-24,15;UBERON:0000002,7.25e-08,6;UBERON:0001560,7.25e-08,6;UBERON:0000073,1.99e-07,53;UBERON:0002616,1.99e-07,53;UBERON:0001049,4.48e-07,56;UBERON:0005068,4.48e-07,56;UBERON:0006241,4.48e-07,56;UBERON:0007135,4.48e-07,56 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,9.15490417902499,11.7214015527098,2.95547618953547,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.665574309221114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.371807292777007,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0.504143392443436,0.138314504928436,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0.971421986118279,1.16969731731053,2.78531085225916,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p26@CHN2 | |||
}} |
Revision as of 16:17, 22 January 2014
Short description: | p26@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_CHN2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -446bp_to_ENST00000222792_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | P52757 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.15e-60 | 6 |
rhombic lip | 8.15e-60 | 6 |
regional part of metencephalon | 2.91e-40 | 9 |
metencephalon | 2.91e-40 | 9 |
future metencephalon | 2.91e-40 | 9 |
segmental subdivision of hindbrain | 1.81e-30 | 12 |
hindbrain | 1.81e-30 | 12 |
presumptive hindbrain | 1.81e-30 | 12 |
segmental subdivision of nervous system | 3.33e-28 | 13 |
posterior neural tube | 1.40e-24 | 15 |
chordal neural plate | 1.40e-24 | 15 |
uterine cervix | 7.25e-08 | 6 |
neck of organ | 7.25e-08 | 6 |
regional part of nervous system | 1.99e-07 | 53 |
regional part of brain | 1.99e-07 | 53 |
neural tube | 4.48e-07 | 56 |
neural rod | 4.48e-07 | 56 |
future spinal cord | 4.48e-07 | 56 |
neural keel | 4.48e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.49e-09 | 5 |