FFCP PHASE1:Hg19::chr7:117254079..117254080,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:117254079..117254080,+ | |||
|id=chr7:117254079..117254080,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.10e-41;1!UBERON:0003056;1.31e-14;3 | |||
|ontology_enrichment_disease=DOID:1799!9.25e-07!1;DOID:10165!9.25e-07!1;DOID:1798!9.25e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;5.69e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.70e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!8.88e-15!27;UBERON:0005409!3.78e-11!35;UBERON:0000059!2.12e-08!11;UBERON:0000941!2.95e-07!1;UBERON:0004904!2.95e-07!1;UBERON:0002464!2.95e-07!1;UBERON:0001021!2.95e-07!1;UBERON:0001785!2.95e-07!1;UBERON:0002114!3.90e-07!12;UBERON:0002134!5.26e-07!1;UBERON:0005208!5.26e-07!1;UBERON:0005946!5.26e-07!1;UBERON:0005965!5.26e-07!1;UBERON:0002078!5.26e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;8.10e-41;1!UBERON:0001785;8.10e-41;1!UBERON:0002464;8.10e-41;1!UBERON:0004904;8.10e-41;1!UBERON:0001021;8.10e-41;1!UBERON:0003714;3.44e-21;2!UBERON:0005162;3.44e-21;2!UBERON:0000122;3.44e-21;2!UBERON:0002114;1.83e-14;2!UBERON:0002108;3.22e-09;4!UBERON:0001871;5.22e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.62e-41,1;UBERON:0001785,6.62e-41,1;UBERON:0002464,6.62e-41,1;UBERON:0004904,6.62e-41,1;UBERON:0001021,6.62e-41,1;UBERON:0003902,6.62e-41,1;UBERON:0005425,6.62e-41,1;UBERON:0003714,3.11e-21,2;UBERON:0005162,3.11e-21,2;UBERON:0000122,3.11e-21,2;UBERON:0002114,2.09e-14,2;UBERON:0001781,2.53e-11,4;UBERON:0002108,3.49e-09,4;UBERON:0000966,5.54e-08,6;UBERON:0005388,5.54e-08,6;UBERON:0001802,5.54e-08,6;UBERON:0001871,5.38e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782560276832555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.424059214301822,0,0.995261931078505,0.442287822516696,0,0.593042257361244,0.123563938946503,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,2.85538840518309,0,0.11796972334774,0,0,0,0,0,0,0,1.56302802246618,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,1.09726132484042,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628776414746108,0,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr7:117254079..117254080,+ | |||
}} |
Revision as of 18:59, 22 January 2014
Short description: | p@chr7:117254079..117254080, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:117254079..117254080, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.62e-41 | 1 |
cranial nerve | 6.62e-41 | 1 |
nerve trunk | 6.62e-41 | 1 |
nerve connecting eye with brain | 6.62e-41 | 1 |
nerve | 6.62e-41 | 1 |
retinal neural layer | 6.62e-41 | 1 |
presumptive neural retina | 6.62e-41 | 1 |
neural tissue | 3.11e-21 | 2 |
multi cell component structure | 3.11e-21 | 2 |
neuron projection bundle | 3.11e-21 | 2 |
duodenum | 2.09e-14 | 2 |
layer of retina | 2.53e-11 | 4 |
small intestine | 3.49e-09 | 4 |
retina | 5.54e-08 | 6 |
photoreceptor array | 5.54e-08 | 6 |
posterior segment of eyeball | 5.54e-08 | 6 |
temporal lobe | 5.38e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.70e-21 | 2 |