FFCP PHASE1:Hg19::chr7:155437177..155437202,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=155435 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27223 | |||
|TSSclassifier=strong | |||
|UniProt=Q96EV2 | |||
|association_with_transcript=0bp_to_NM_053043,uc003wme.2,uc010lqk.1_5end | |||
|description=CAGE_peak_3_at_RBM33_5end | |||
|id=chr7:155437177..155437202,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.32e-11!57;UBERON:0005068!2.32e-11!57;UBERON:0006241!2.32e-11!57;UBERON:0007135!2.32e-11!57;UBERON:0000073!3.89e-11!94;UBERON:0001016!3.89e-11!94;UBERON:0001017!1.30e-10!82;UBERON:0005743!1.54e-10!86;UBERON:0002020!3.77e-10!34;UBERON:0003528!3.77e-10!34;UBERON:0002791!6.52e-10!33;UBERON:0001893!1.05e-09!34;UBERON:0002780!1.06e-09!41;UBERON:0001890!1.06e-09!41;UBERON:0006240!1.06e-09!41;UBERON:0003080!2.23e-09!42;UBERON:0007023!2.53e-09!115;UBERON:0001869!4.59e-09!32;UBERON:0002346!5.73e-09!90;UBERON:0002616!9.70e-09!59;UBERON:0002619!1.37e-08!22;UBERON:0000956!2.68e-08!25;UBERON:0000203!2.68e-08!25;UBERON:0003075!5.20e-08!86;UBERON:0007284!5.20e-08!86;UBERON:0000955!5.89e-08!69;UBERON:0006238!5.89e-08!69;UBERON:0001950!7.95e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.38e-09;34!UBERON:0002020;2.38e-09;34!UBERON:0002619;2.85e-09;22!UBERON:0002791;6.32e-09;32!UBERON:0000956;8.34e-09;25!UBERON:0000203;8.34e-09;25!UBERON:0001950;1.84e-08;20!UBERON:0001893;2.12e-08;34!UBERON:0001869;2.70e-08;32!UBERON:0002780;3.40e-07;41!UBERON:0001890;3.40e-07;41!UBERON:0000073;4.44e-07;53!UBERON:0002616;4.44e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.28e-12,56;UBERON:0005068,4.28e-12,56;UBERON:0006241,4.28e-12,56;UBERON:0007135,4.28e-12,56;UBERON:0001016,2.47e-11,89;UBERON:0000073,5.67e-11,53;UBERON:0002616,5.67e-11,53;UBERON:0003528,8.59e-11,34;UBERON:0002020,8.59e-11,34;UBERON:0001017,9.56e-11,81;UBERON:0002346,4.21e-10,86;UBERON:0002791,5.94e-10,32;UBERON:0001893,7.27e-10,34;UBERON:0002780,9.05e-10,41;UBERON:0001890,9.05e-10,41;UBERON:0003080,9.05e-10,41;UBERON:0006240,9.05e-10,41;UBERON:0002619,1.50e-09,22;UBERON:0001869,3.99e-09,32;UBERON:0000956,5.68e-09,25;UBERON:0000203,5.68e-09,25;UBERON:0003075,5.79e-09,82;UBERON:0007284,5.79e-09,82;UBERON:0001950,1.20e-08,20;UBERON:0007023,1.63e-08,114;UBERON:0010371,2.56e-08,104;UBERON:0000955,3.81e-08,68;UBERON:0006238,3.81e-08,68;UBERON:0003056,1.28e-07,61;UBERON:0004121,5.22e-07,171;UBERON:0000924,5.22e-07,171;UBERON:0006601,5.22e-07,171 | |||
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| |||
|short_description=p3@RBM33 | |||
}} |
Revision as of 20:18, 22 January 2014
Short description: | p3@RBM33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RBM33_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_053043, uc003wme.2, uc010lqk.1_5end |
EntrezGene: | RBM33 |
HGNC: | 27223 |
UniProt: | Q96EV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 4.28e-12 | 56 |
neural rod | 4.28e-12 | 56 |
future spinal cord | 4.28e-12 | 56 |
neural keel | 4.28e-12 | 56 |
nervous system | 2.47e-11 | 89 |
regional part of nervous system | 5.67e-11 | 53 |
regional part of brain | 5.67e-11 | 53 |
brain grey matter | 8.59e-11 | 34 |
gray matter | 8.59e-11 | 34 |
central nervous system | 9.56e-11 | 81 |
neurectoderm | 4.21e-10 | 86 |
regional part of telencephalon | 5.94e-10 | 32 |
telencephalon | 7.27e-10 | 34 |
regional part of forebrain | 9.05e-10 | 41 |
forebrain | 9.05e-10 | 41 |
anterior neural tube | 9.05e-10 | 41 |
future forebrain | 9.05e-10 | 41 |
regional part of cerebral cortex | 1.50e-09 | 22 |
cerebral hemisphere | 3.99e-09 | 32 |
cerebral cortex | 5.68e-09 | 25 |
pallium | 5.68e-09 | 25 |
neural plate | 5.79e-09 | 82 |
presumptive neural plate | 5.79e-09 | 82 |
neocortex | 1.20e-08 | 20 |
adult organism | 1.63e-08 | 114 |
ecto-epithelium | 2.56e-08 | 104 |
brain | 3.81e-08 | 68 |
future brain | 3.81e-08 | 68 |
pre-chordal neural plate | 1.28e-07 | 61 |
ectoderm-derived structure | 5.22e-07 | 171 |
ectoderm | 5.22e-07 | 171 |
presumptive ectoderm | 5.22e-07 | 171 |